mRNA_S-firma_M_contig9268.20212.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: A0A6H5KBQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBQ8_9PHAE) HSP 1 Score: 236 bits (603), Expect = 1.650e-70 Identity = 117/148 (79.05%), Postives = 126/148 (85.14%), Query Frame = 1
Query: 19 RFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHRKVTERHERLHKXXXXXXXXQSPESVIPTFLF 462
RFHHSSFFGGGYVEAAGMLVAE+GVLKTLYPHSGHYRPTNQHL+ LLKFL GLGVDL AL+VDAQRVHKVARPDKR S+PRVRKMDNPFMVSA YLLDFFEAKYLAWSS FDEL+ KV ERHERLH+ P++ +P F F
Sbjct: 422 RFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLNGLGVDLDALEVDAQRVHKVARPDKRASYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDELYLKVNERHERLHQHL--------PDAELPKFRF 561
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: A0A4D9DCJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCJ4_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.510e-29 Identity = 62/117 (52.99%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 19 RFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHR 369
RFHHSSFF G V+AAG+ VA GVL+ LYPHSGHYRP++ HL LL FL VD++ +QVD Q V KVAR T R RK+D+P+M + L+ F AK AW +FDE+ R
Sbjct: 269 RFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMAVMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDEMLR 385
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: W7U6C7_9STRA (Calmodulin binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6C7_9STRA) HSP 1 Score: 121 bits (304), Expect = 3.080e-28 Identity = 62/117 (52.99%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 19 RFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHR 369
RFHHSSFF G V+AAG+ VA GVL+ LYPHSGHYRP++ HL LL FL VD++ +QVD Q V KVAR T R RK+D+P+M + L+ F AK AW +FDE+ R
Sbjct: 393 RFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMALMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDEMLR 509
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: M4B446_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B446_HYAAE) HSP 1 Score: 115 bits (288), Expect = 4.580e-27 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 1 QSQRLERFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHR---KVTERHERLHK 402
+++++ R HH+SF GG V+ AGM+V GV+KT++PHSGHYRP+ L LL+FL GVDLSA+ VD QR+ KV R + VRK+DN +A + F E K+LAW +FDEL K+T+ H L +
Sbjct: 141 ETKKIPRIHHTSFVGGECVQTAGMMVITGGVIKTIFPHSGHYRPSEYELLVLLRFLVKNGVDLSAVDVDVQRIQKVYRESVNGTL--VRKLDNAHFWNAYRVWYFLEEKHLAWKIGLFDELVETVGKMTDTHVLLER 275
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: A0A2D4BS79_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS79_PYTIN) HSP 1 Score: 115 bits (288), Expect = 5.890e-27 Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 1 QSQRLERFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHRKVTERH 387
+++++ R HH+SF G V+ AGM+V + GV++T+YPHSGHYRP+ L LL+FL GVD+S ++VD QR+ KV R + RVRK+DN A +L F E K+LAW +FD++ V + H
Sbjct: 153 ETKKIPRIHHTSFVAGECVQTAGMMVIKNGVIETIYPHSGHYRPSEHELLVLLRFLVAQGVDMSQVRVDVQRIQKVFRDTVNGT--RVRKIDNAHFWDAYRVLFFLEQKHLAWKIGLFDDIVDAVAKMH 279
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: A0A8K1C508_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C508_PYTOL) HSP 1 Score: 114 bits (286), Expect = 1.030e-26 Identity = 59/128 (46.09%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 QSQRLERFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHRKVTER 384
++++ R HH+SF GG V+ AGM+V G+++T+YPHSGHYRP+ L LL+FL GVDL+ ++VD QR+ KV R S VRK+DN +A +L F E K+LAW FDEL V E+
Sbjct: 138 ETKKNPRIHHTSFVGGECVQTAGMMVINDGIIETIYPHSGHYRPSEHELLVLLRFLVAQGVDLTDVKVDVQRIQKVFRSSINGSL--VRKIDNAHFWNAYRVLYFLEQKHLAWKIGFFDELVDTVAEK 263
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: A0A1W0A215_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A215_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.430e-26 Identity = 55/127 (43.31%), Postives = 83/127 (65.35%), Query Frame = 1
Query: 4 SQRLERFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHRKVTER 384
++++ R HH+SF GG V+ AG++V E+GVLK +YPHSGHYRPT + LL+FL G GV L+ ++VD QR KV+R +R + ++ K N AL++L+F + K AW+ ++FD+L R
Sbjct: 165 TKQVPRIHHTSFVGGECVQTAGIMVIEQGVLKVIYPHSGHYRPTESEVLVLLRFLLGRGVRLNDVEVDVQRFQKVSR--ERDNVSKISKKANAMFWPALHVLNFLQVKEKAWAGTLFDDLEMAAKNR 289
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: H3GBS3_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3GBS3_PHYRM) HSP 1 Score: 113 bits (283), Expect = 2.850e-26 Identity = 57/128 (44.53%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 QSQRLERFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHRKVTER 384
+++++ R HH+SF GG V+ AGM+V G++KT+YPHSGHYRP+ L LL+FL GVDLS + VD QR+ KV R + V+K+DN +A + F E K+LAW +FDEL V ++
Sbjct: 141 ETKKIPRIHHTSFVGGECVQTAGMMVIMDGIIKTIYPHSGHYRPSEYELLVLLRFLVNNGVDLSDVDVDVQRIQKVFRDTVNGAL--VKKLDNAHFWNAYRVWHFLEEKHLAWKIGLFDELVETVGQK 266
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: A0A3M6VNP6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNP6_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.800e-26 Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 1 QSQRLERFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHRKVTERHERLH 399
+++++ R HH+SF GG V+ AGM+V G++KT+YPHSGHYRP+ L LL+FL G+DLS + VD QR+ KV R + V+K+DN +A + F E K++AW +FDEL V E+ R+H
Sbjct: 157 ETKKIPRIHHTSFVGGECVQTAGMMVITNGIIKTIYPHSGHYRPSEYELLVLLRFLVNNGIDLSDVDVDVQRIQKVFRISVNGTL--VKKLDNAHFWNAYRVWYFLEEKHVAWKVGLFDELVETVGEK-TRIH 286
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Match: A0A484DTR1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTR1_BRELC) HSP 1 Score: 112 bits (279), Expect = 1.360e-25 Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 1 QSQRLERFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTSFPRVRKMDNPFMVSALYLLDFFEAKYLAWSSSIFDELHRKV 375
+++++ R HH+SF GG V+ AGM+V GV+KT+YPHSGHYRP+ L LL+FL GVDLS + VD QR+ KV R + V+K+DN +A + + E+K+ AW +FDEL V
Sbjct: 157 ETKKIPRIHHTSFVGGECVQTAGMMVITDGVIKTIYPHSGHYRPSEYELLVLLRFLVNNGVDLSNVNVDVQRIQKVYRQSLNGTL--VKKLDNAHFWNAYRVWHYLESKHRAWKVGLFDELAETV 279 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9268.20212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9268.20212.1 >prot_S-firma_M_contig9268.20212.1 ID=prot_S-firma_M_contig9268.20212.1|Name=mRNA_S-firma_M_contig9268.20212.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=241bp QSQRLERFHHSSFFGGGYVEAAGMLVAEKGVLKTLYPHSGHYRPTNQHLQback to top mRNA from alignment at S-firma_M_contig9268:2667..4082- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9268.20212.1 ID=mRNA_S-firma_M_contig9268.20212.1|Name=mRNA_S-firma_M_contig9268.20212.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=1416bp|location=Sequence derived from alignment at S-firma_M_contig9268:2667..4082- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9268:2667..4082- >mRNA_S-firma_M_contig9268.20212.1 ID=mRNA_S-firma_M_contig9268.20212.1|Name=mRNA_S-firma_M_contig9268.20212.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1446bp|location=Sequence derived from alignment at S-firma_M_contig9268:2667..4082- (Sphaerotrichia firma Sfir_13m male)back to top |