mRNA_S-firma_M_contig923.20174.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: A0A6H5L446_9PHAE (UDENN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L446_9PHAE) HSP 1 Score: 624 bits (1609), Expect = 2.120e-200 Identity = 470/960 (48.96%), Postives = 535/960 (55.73%), Query Frame = 2
Query: 2 GALESVPEDRMHLVQFTDCENASTYGCCVTVTQVLHDPSPRLVERLRERERMHAAARTLQRFMH---SARSSATGXXXXXXXSGHRCSTPPRKGIGGGIGASRFGFQTPPPGSGGTGPPGDPANSGHGSELSP-TSFSGMINRFFASNPGAEVDTPVAVADGEFGQPALPAAAAVASG------APYSPPRSASAGGEGRSPARYSGAAAETAAAAAVAARTGSPSGVSLIPXXXXXXXXXXXXXXXXXXXRAPSSPCPKTQVSADY--PARGGSQRARSAGYSGGGGGIREDTVLERGTRERGAEGKSAPASAPGMFSDDESESDAGRSSDTDRDDSFGGG----VDNPAXXXXXXXXXXXXXXXXXXXXXXXXTETGTQHPNGSPTLGPGGGAGALSTPPGVTLRSRVVDPRDVAGAAAGGXXXXXXXXXXTAAEACGASWAVLVERCYVMVSCHRNHPLMFKVLKAVADADRSTRPGAN-----------------------ATVSPP--PPSHTVGDTVRGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAKGRHRRMLRDKFLHQVRTDKSCTEEGKKVSLHCPAYLRGPLEVASTALELWSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVGVQAPFDPRSYAFGGVVVLDLDARQSSGQLFMAGLDEKLPVPEDVLSELKKANTLRGNRGRGAGSSVGR-SPAARTWD-----SSRSPKALN--------TSPAGSWRAGRG---RGRRXXXXXXXXXXXXXXTGL-------RSHFAFQASTFMAGLTPDERGTVIRLRSLVKGHVSSLCGDLGVSEMWRKYGAFNSATKNFDFHPDWFTEPLEARLRFQVGVARTQMFVSFVERCRQRD-SEVNEQ 2683
G E+VPEDRMHL+QFTDC+NASTYGCC+TVT VLHDPSPRLV+RL+ERERMH AARTLQRF + S+ G +G+ C+TP R G SRFGFQTPP ++ SP +SFSGMINRFF SNPG VADG G A+ AA A G + SPPRS GE S + VAA SPS P XXX RAPSSPCP+T S +Y G S R+RSAG+ G V R R G K+ P GMFSDDESESDAG SS TD DS GGG V G + +G+P TPPGVTLR+R V+PR VA AAA +A SW+V VE+ YVMVS HRNHPLMFKVLKA+ADA+RS RPGAN A++SPP P VG GGG+ E+AK RHRRM+RDKFL QVRTDK C EEGKKVSL+CPA+LR PLE+ +LELWSTAVLF CVSE+ L+AL++LLLEKTLVVCG D+G+VSMAATALLSLLDPFKWEGVFVPVVPL LMDVLDSPVPALVGVQAP DP S A GV VLDLDA +SG+LFMAG E VP +++ L+ ANTLRG R R +G+ GR SP TW +SPK N TS GS RG RG R XXX RSH F ASTFMAGLT +E+G V+RLRSLVK VS LCGDL S+MWRKY AFNS T NFDFHPDWFTEPLEA+LRFQV V+RTQMFVSFVERCRQ+D SEV ++
Sbjct: 122 GTREAVPEDRMHLLQFTDCDNASTYGCCLTVTHVLHDPSPRLVQRLQERERMHQAARTLQRFFTLSAACLSTDEGHHWRGDSTGYGCATPTRTPGEEGGSFSRFGFQTPPXXXXXXXXXXXXXSAASEQGNSPASSFSGMINRFF-SNPGV-------VADGGSGVAAVGAAVADGGGTGPGDDSDKSPPRSVR--GERTSLRKKR----------PVAAVAVSPSR----PSPPASPXXXAALSSSRLRQRAPSSPCPRTSPSGEYCHHPTGMSGRSRSAGH----GXXXXGNVAGR-ERSDGTVKKNVP----GMFSDDESESDAGYSS-TDGGDSLGGGSFEAVSFSGSQVANGTRRGQSGGVRGYAKGSCPEMPGAERSSGTPMT--------PRTPPGVTLRNRTVNPRTVAAAAA--VIGGATKGRRASAGRGRLSWSVQVEKGYVMVSSHRNHPLMFKVLKAIADAERSARPGANPSSSSLSPXXXXXXXXXXXXXVIASLSPPRLPSGGVVGVNKSGGGKEKSPSASRFRSVAAAAA------------------------------------EQAKERHRRMVRDKFLQQVRTDKRCIEEGKKVSLYCPAFLRAPLELTPPSLELWSTAVLFGCVSERTILRALDLLLLEKTLVVCGRDIGIVSMAATALLSLLDPFKWEGVFVPVVPLALMDVLDSPVPALVGVQAPLDPLSSAADGVAVLDLDANNASGELFMAGAHEDSTVPGHLVTSLEHANTLRGKR-RSSGAPAGRRSP---TWKLEPPAGGKSPKHENSSSHDRVATSTGGSGSGTRGLSPRGTRGGAPLSRLRSSXXXXXXXXXSPRPRSHLVFHASTFMAGLTLEEKGVVLRLRSLVKARVSRLCGDLVASDMWRKYCAFNSVTNNFDFHPDWFTEPLEAQLRFQVAVSRTQMFVSFVERCRQKDISEVGDE 997
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: A0A4D9CNF6_9STRA (UDENN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNF6_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.020e-38 Identity = 118/350 (33.71%), Postives = 168/350 (48.00%), Query Frame = 2
Query: 1655 RDKFLHQVRTDKSCTEEGKKVSLHCPAYLRGP--LEVASTALELWSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVGVQAPFDP-RSYAFGGVVVLDLDARQSSGQLFMAGLDEKLPVPEDVLSELKKANTLRGNRGRGAGSSVGRSPAARTWDSSRSPKALNTSPAGSWRAGRGRGRRXXXXXXXXXXXXXXTGLRSHFA-FQASTFMAGLTPDERGTVIRLRSLVKGHVSSLCGDLGVSEMWRKYGAFNSATKNFDFHPDWFTEPLEARLRFQVGVARTQMFVSFVERCRQRDSEVNEQDQK 2692
R +FL ++ D G ++L P Y L++ L+ W+ AVLFS VS ++ + +LLLE++LVV G D G+VS +TA +SLL PFKW+GVF+P++P L D+L SPVP ++GVQ PFDP RS L + L + L KLP+ +L LK+A+ L R RS +A +T+MAGLT DER + LR + + +V LCGDL WRKYG F+S ++ F+F P WF EP+ L +Q TQMF S+V++ R D + + Q Q+
Sbjct: 467 RRRFLRYIQQDVVFPSTGI-LTLSFPPYAPSTTRLDLPLVPLQDWTVAVLFSHVSVDVIIKCVNLLLLEQSLVVIGEDQGLVSAISTAFVSLLQPFKWDGVFIPLLPTALSDILQSPVPFVLGVQPPFDPTRSTPHAAA----LHIGRCKEHLRLPDLTVKLPLCYQLLQALKQASELFSCR------------------------------------------------------------RSRWANLHLATYMAGLTGDERQALASLRGIFREYVQGLCGDLAYPGAWRKYGTFDSTSETFEFFPSWFLEPMRMMLEYQSAFVHTQMFSSYVDKRRTEDMQKSRQRQR 751
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: A0A7S4QET6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QET6_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 8.000e-14 Identity = 83/295 (28.14%), Postives = 134/295 (45.42%), Query Frame = 2
Query: 1781 WSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVGVQAPFDPRSYAFGGVVVLDLDARQSSGQLFMAGLDEKLPVPEDVLSELKKANTLRGNRGRGAGSSVGRSPAARTWDSSRSPKALNT--SPAGSWRAGRGRGRRXXXXXXXXXXXXXXTGLRSHFAFQASTFMAGLTPDERGTVIRLRSLVKGHVSSLCGDLG-VSEMWRKYGAFNSATKNFDFHPDWFTEPLEARLRFQVGVARTQMFVSFVERCR 2656
W A L + + + L +LL+E++++V G + V+ + ALL LL PFKW GVF+P++P++++D ++SPVP + GV A DP ++ D R + ++E L V L+ K + GN LN P + R RR + L S F G +P E + ++ H+ + G +G + WR YG FN+ + NF+F+P F EPL A+L+FQ +A+TQ+FV +V++ R
Sbjct: 602 WGFAKLLLKLGSDSLMNVLMLLLIERSVLVLGENSAEVTACSCALLELLQPFKWAGVFMPLLPISMLDFVNSPVPFVAGVVAK-DPCH--------IEKDHRA------LEAIEEGLSVVN--LNNGKLCISTEGNL----------------------EMLLNQCKEPTFTLLFHEQRLRRLAKDRS--------SALSSFHMF----IQQGFSPQESVIIHSACVSIERHLRGMSGLVGRCRDGWRHYGKFNANSNNFEFYPSLFVEPLRAKLQFQEMMAQTQLFVGYVDKRR 845
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: A0A7S3GQI8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQI8_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.190e-13 Identity = 87/330 (26.36%), Postives = 148/330 (44.85%), Query Frame = 2
Query: 1709 KKVSLHCPAYLRGPLEVASTALEL--WSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVGVQAPFDPRSYAFGGVVVLDLDARQSSGQLFMAGLDEKLPVPEDVLSELKKANTLRGNRGRG-----AGSSVGRSPAARTWDSSRSPKALNTSPAGSWRAGRGRGRRXXXXXXXXXXXXXXTGLRSHFAFQASTF---------MAGLTPDERGTVIRLRSLVKGHVSSLCGD-LGVSEMWRKYGAFNSATKNFDFHPDWFTEPLEARLRFQVGVARTQMFVSFVE 2647
K + L Y++ ++++ AL L W+ A+L + + + ++ L LL E++L+V G D GMV+ +A LL PF WEG+ VP++P+ + LD+PVP ++GV A P VL L+ + ++ ++ + + S +K LR R R S G + + P+ A + + L+ +A+ F M L+ + ++ + + V + +S+CG+ L WR++G NS T F+F PD F PL+A LR Q V TQ+FVSF++
Sbjct: 685 KFIDLSFGGYMKS-IKISYKALMLKEWTVAILIALLPSELIVKILSQLLQEQSLLVYGSDAGMVTAVVSAFTLLLQPFSWEGIHVPLLPMAAYEALDAPVPFVIGVVASSRPAVPISSSAGVLSLNDFIHHPEQYVPSCFDETTMRHTMASRDEKH--LRDTRFRRNFIYPEDGSNGEVDLGLKFFEAPCPEDSQQGIAPLLDPMQCSQLKELHQFIAYHAVKIRASLKFAQTPRAAAFNSTCAIKSVMNDLSDEALRSLSHVLNRVLAYNTSICGEVLTQPGGWRQFGVLNSRTNQFEFLPDLFMAPLKAHLRLQECVINTQLFVSFMD 1011
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: K0TPB2_THAOC (cGMP-dependent protein kinase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPB2_THAOC) HSP 1 Score: 82.0 bits (201), Expect = 7.460e-12 Identity = 77/283 (27.21%), Postives = 125/283 (44.17%), Query Frame = 2
Query: 1781 WSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVGVQAPFDPRSYAFGGVVVLDLDARQSSGQLFMAGLDEKLPVPEDVLSELKKANTLRGN----RGRGAGSSVGRSPAARTWDSSRSPKALNTSPAGSWRAGRGRGRRXXXXXXXXXXXXXXTGLRSHFAFQASTFMAGLTPDERGTVIRLRSLVKGHVSSLCGDLGVSEM---WRKYGAFNSATKNFDFHPDWFTEPLEARLRFQV 2608
W + LF + + + L++LLLE++++V G V+ TALL LLDP+KW F+P++P ++D + SPVP + G + ++ +Q + + V + +L L N + G R +G + RS T P S R + LRS AF F G + E T++R++ ++K H+S LG+++ WR+YG FN A+ FDF PD F +PL+ R+ FQ+
Sbjct: 988 WGVSTLFLRIKDSGLIILLKLLLLERSVLVVGETSEEVTACTTALLELLDPYKWASAFMPLLPRDMLDFVSSPVPFIAG-----------------MIVENKQHLNSII-----QDHGVKDAMLHGLSVVNLVSGKLIVTREQGTSDMLRRS--------------FQTIPELSLYQKR----------LEEYCSSPTSNLRSFDAF----FKHGASRKESLTILRIKRVIKKHMSQFT--LGLTDKPDAWRQYGEFNEASGAFDFCPDKFIQPLKDRMIFQI 1218
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: A0A7S3GU22_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU22_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.410e-10 Identity = 38/102 (37.25%), Postives = 64/102 (62.75%), Query Frame = 2
Query: 1721 LHCPAYLRG---PLEVASTALELWSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVG 2017
+ CP Y+ L+ T E W+ AVLF+ +S Q + + +LL+EK+L++ G + G+V+ A+++L+ PF WEG+FVP+VP ++ +PVP +VG
Sbjct: 14 IRCPGYIEDFKVDLKALLTTKE-WTCAVLFTHLSSQIIFKIINLLLMEKSLIIHGKNAGIVTTITMAVINLISPFLWEGIFVPLVPDNARELFGAPVPLIVG 114
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: A0A7S2KN64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KN64_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 4.290e-10 Identity = 75/281 (26.69%), Postives = 121/281 (43.06%), Query Frame = 2
Query: 1781 WSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVGVQAPFDPRSYAFGGVVVLDLDARQSSGQLFMAGLDEKLPVPEDVLSELKKANTLRGN----RGRGAGSSVGRSPAARTWDSSRSPKALNTSPAGSWRAGRGRGRRXXXXXXXXXXXXXXTGLRSHFAFQASTFMAGLTPDERGTVIRLRSLVKGHVSSLCGDLGVS-EMWRKYGAFNSATKNFDFHPDWFTEPLEARLRFQV 2608
+ A LF + + + L++LLLE++++V G V+ ATALL LLDP+KW F+P++P ++D + SPVP + G+ +D +Q + + V + +L L N + G R +G + RS T P + R + LR +F F G T E T+ ++++L+K H+S L + W++YG FN T FDF PD F +PL+ R+ FQ+
Sbjct: 170 YGLATLFLGIKDSGLVILLKLLLLERSVLVVGEKSEAVTACATALLELLDPYKWASAFMPLLPREMLDFVSSPVPFIAGML-----------------VDGKQD-----LHSIIHDHGVKDAMLHGLSIVNLVSGKLIVTREQGTSDMLRRS--------------FQTIPELALYQKR----------LDSYYRDPSSNLRCFKSF----FRHGATLRESLTLKKVKALIKKHLSQFTMGLNDKPDAWQQYGEFNKHTGAFDFSPDKFIQPLKDRMIFQI 400
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: A0A482S8K5_9ARCH (DENN domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8K5_9ARCH) HSP 1 Score: 73.9 bits (180), Expect = 6.610e-10 Identity = 50/131 (38.17%), Postives = 77/131 (58.78%), Query Frame = 2
Query: 1655 RDKFLHQVRTDKSCTEEG--KK--VSLHCPAYLRGPLEVAST--ALELWSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVGVQAP 2029
R+ FL +RT EG KK V+L P+Y+ L V+ T +++W+ AVL + + +LLLEK+L++ G D +VS+ T L LL P+KW G+FVP++P +VL++PVP +VG+ P
Sbjct: 23 RNDFLSFLRTYNINKLEGGWKKGSVNLSFPSYMDN-LVVSKTQATIDMWAVAVLTYFIPTDVIVHIHLMLLLEKSLIILGSDAALVSILCTGFLHLLAPYKWTGIFVPLLPPLAQEVLEAPVPFIVGMYTP 152
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: A0A830BAE0_9LAMI (Denn domain-containing protein 5b n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BAE0_9LAMI) HSP 1 Score: 70.1 bits (170), Expect = 5.060e-9 Identity = 41/132 (31.06%), Postives = 80/132 (60.61%), Query Frame = 2
Query: 1769 ALELWSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVGVQAPFDPRSYAFGGVVVLDLDARQSSGQLFMAGLDEKLPVPEDVLSELK 2164
AL LWSTA + +S ++ L + +LLEK + V +LG++S +++ + P++W+ +F+P++P+ ++D LD+PVP +VG+Q + +V +++D Q + GL + LP ++++SEL+
Sbjct: 63 ALSLWSTATICRVLSLESILALVTSVLLEKQVAVLCPNLGVLSAVVLSIIPTIRPYEWQSLFLPILPVKMLDFLDAPVPFVVGLQHKPEDLKMKASHLVQVNVDKNQVKSR----GLPQ-LPRNKELISELR 189
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Match: A0A0D2TFB5_GOSRA (UDENN domain-containing protein n=41 Tax=Gossypium TaxID=3633 RepID=A0A0D2TFB5_GOSRA) HSP 1 Score: 71.2 bits (173), Expect = 1.240e-8 Identity = 36/85 (42.35%), Postives = 59/85 (69.41%), Query Frame = 2
Query: 1769 ALELWSTAVLFSCVSEQATLQALEVLLLEKTLVVCGGDLGMVSMAATALLSLLDPFKWEGVFVPVVPLTLMDVLDSPVPALVGVQ 2023
AL +W+TA + +S + L L +LLEK +VV +LG++S +++ L+ PF+W+ +F+PV+P+ ++D LD+PVP LVGVQ
Sbjct: 593 ALSVWTTATICRVLSLDSILAVLAGVLLEKQVVVISPNLGVLSAVVLSIVPLIRPFQWQSLFLPVLPMRMLDFLDAPVPFLVGVQ 677 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig923.20174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig923.20174.1 >prot_S-firma_M_contig923.20174.1 ID=prot_S-firma_M_contig923.20174.1|Name=mRNA_S-firma_M_contig923.20174.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=1001bp MHLVQFTDCENASTYGCCVTVTQVLHDPSPRLVERLRERERMHAAARTLQback to top mRNA from alignment at S-firma_M_contig923:9832..26420- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig923.20174.1 ID=mRNA_S-firma_M_contig923.20174.1|Name=mRNA_S-firma_M_contig923.20174.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=16589bp|location=Sequence derived from alignment at S-firma_M_contig923:9832..26420- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig923:9832..26420- >mRNA_S-firma_M_contig923.20174.1 ID=mRNA_S-firma_M_contig923.20174.1|Name=mRNA_S-firma_M_contig923.20174.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=6006bp|location=Sequence derived from alignment at S-firma_M_contig923:9832..26420- (Sphaerotrichia firma Sfir_13m male)back to top |