mRNA_S-firma_M_contig9224.20170.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9224.20170.1
Unique NamemRNA_S-firma_M_contig9224.20170.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: D8LB38_ECTSI (Methionine aminopeptidase 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB38_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 1.650e-128
Identity = 185/190 (97.37%), Postives = 189/190 (99.47%), Query Frame = 1 
Query:    1 RYGQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            R+GQTEPPTIPV+DLFEEGSFPEGEILEHPRDFN+FRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGI+ AGIDVPLNEVG
Sbjct:  164 RHGQTEPPTIPVEDLFEEGSFPEGEILEHPRDFNSFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIRNAGIDVPLNEVG 353
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BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: A0A6H5KY83_9PHAE (Methionine aminopeptidase 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY83_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 7.250e-127
Identity = 181/189 (95.77%), Postives = 186/189 (98.41%), Query Frame = 1 
Query:    4 YGQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            +GQTEPPTIPV+DLFEEGSFPEGEILEHPRDFN+FRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRR+AQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGT VEGRIIDCAWTVSFDPQFDPLLEAAREATN GI+ AGIDVPLNEVG
Sbjct:    6 HGQTEPPTIPVEDLFEEGSFPEGEILEHPRDFNSFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRYAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTHVEGRIIDCAWTVSFDPQFDPLLEAAREATNAGIRNAGIDVPLNEVG 194
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BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: D8LB39_ECTSI (Methionine aminopeptidase 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB39_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 2.580e-126
Identity = 182/190 (95.79%), Postives = 186/190 (97.89%), Query Frame = 1 
Query:    1 RYGQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            R+GQTEPPTIPV+DLFEEGSFPEGEILEHPRDFN+FRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCT LEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEG IIDCAWTVSFDPQFDPLLEAAREATN GI+ AGIDVPLNEVG
Sbjct:  147 RHGQTEPPTIPVEDLFEEGSFPEGEILEHPRDFNSFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTTLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGHIIDCAWTVSFDPQFDPLLEAAREATNAGIRNAGIDVPLNEVG 336
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BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: A0A6H5KM93_9PHAE (Methionine aminopeptidase 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM93_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 2.200e-112
Identity = 182/270 (67.41%), Postives = 187/270 (69.26%), Query Frame = 1 
Query:    1 RYGQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLK--------------------------------------------------------------------------------HGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            R+GQTEPPTIPV+DLFEEGSFPEGEILEHPRDFN+FRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRR+AQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLK                                                                                HGDVMKVDFGT VEGRIIDCAWTVSFDPQFDPLLEAAREATN GI+ AGIDVPLNEVG
Sbjct:  142 RHGQTEPPTIPVEDLFEEGSFPEGEILEHPRDFNSFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRYAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKVCAQSRFPGGPFGPPLWRECCAFVAANPGSNRHLRATCSGARNVMFPRLVTPLLYSQQHHSRFGATSTLAHACAFVWYGQHGDVMKVDFGTHVEGRIIDCAWTVSFDPQFDPLLEAAREATNAGIRNAGIDVPLNEVG 411
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BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: A0A835Z307_9STRA (Methionine aminopeptidase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z307_9STRA)

HSP 1 Score: 291 bits (745), Expect = 5.150e-94
Identity = 143/192 (74.48%), Postives = 165/192 (85.94%), Query Frame = 1 
Query:    1 RYGQTEPPTIPVDDL--FEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            RYGQT+PPTIPV +L  F  G+FPEGEI+EHP DFN +RI SEEKRA ER+ +  LY K R AAEVHR+VRR+AQS+IKPGIKL DMC MLE KNRELV+E GL+ GI FPTGCSLNHVAAHYTPN GD+TVL++GDVMKVDFGTQ++GRIIDCAWTVSFDP +DPLLEAA+ ATN G+KTAGIDV L ++G
Sbjct:   99 RYGQTDPPTIPVAELPVFAGGNFPEGEIMEHPGDFNAYRIGSEEKRALERM-HTDLYSKVRLAAEVHREVRRYAQSFIKPGIKLADMCEMLENKNRELVQERGLERGIGFPTGCSLNHVAAHYTPNTGDNTVLQYGDVMKVDFGTQIDGRIIDCAWTVSFDPVYDPLLEAAKMATNEGVKTAGIDVRLCDIG 289
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BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: A0A7S2XZW7_9STRA (Methionine aminopeptidase 2 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZW7_9STRA)

HSP 1 Score: 293 bits (749), Expect = 5.440e-94
Identity = 140/190 (73.68%), Postives = 166/190 (87.37%), Query Frame = 1 
Query:    1 RYGQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            R+GQT+PPTIPV DLF  G FP G+I++HP DFN FR T +EKRA ++ +   LY+K R AAE HRQVRR+AQS+I+PGIKLIDMC  LEEKNR+LV+E+GL+ GIAFPTGCS+NHVAAHYTPN GD+TVL++GDVMK+DFGTQVEGRIIDCAWTV+FDP F+ LLEAAREAT+TGI+T GIDVPLNEVG
Sbjct:  177 RHGQTDPPTIPVADLFPNGHFPIGQIMDHPGDFNVFRTTDDEKRARDQFEEP-LYNKIRLAAECHRQVRRYAQSFIEPGIKLIDMCERLEEKNRQLVQEHGLERGIAFPTGCSINHVAAHYTPNRGDNTVLEYGDVMKIDFGTQVEGRIIDCAWTVAFDPTFESLLEAAREATDTGIRTCGIDVPLNEVG 365
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BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: W7U6D6_9STRA (Methionine aminopeptidase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6D6_9STRA)

HSP 1 Score: 288 bits (736), Expect = 5.250e-92
Identity = 143/190 (75.26%), Postives = 163/190 (85.79%), Query Frame = 1 
Query:    1 RYGQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            RYGQTEPPTIPV  LF EG FP+GEI  HP D NTFRITSEEKRA ERL+ A LYDK R A+EVHRQVR++AQS+I+PGIKLIDMC  LE KNREL++E GL+ G+ FPTGCSLNHVAAHYTPN GD+TVL++GDVMKVDFG Q+EGRIID A+TVSFDP +D LLEA REAT+TGI+TAGIDV L +VG
Sbjct:  180 RYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLE-ADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVG 368
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BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: A0A3R7JX11_9STRA (Methionine aminopeptidase 2 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JX11_9STRA)

HSP 1 Score: 283 bits (725), Expect = 1.480e-91
Identity = 142/190 (74.74%), Postives = 155/190 (81.58%), Query Frame = 1 
Query:    1 RYGQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            R+GQTEPPTIPV+ LF +G FP GEI  HP DFNTFR T EEKRA ER +   LY+  R AAEVHRQVR+ AQS IKPGIKLIDMCT LE KNRELV E G   GI FPTGCSLNHVAAHYTPN+GD+TVLK+GDVMKVDFGTQ+ GRIID AWTVSFDPQFDPLLEAA+ ATN GI +AGID  L E+G
Sbjct:   79 RFGQTEPPTIPVEKLFPDGHFPVGEIQNHPGDFNTFRTTDEEKRALERAE-EDLYETVRHAAEVHRQVRKFAQSLIKPGIKLIDMCTQLENKNRELVVEAGFARGIGFPTGCSLNHVAAHYTPNSGDNTVLKYGDVMKVDFGTQINGRIIDSAWTVSFDPQFDPLLEAAKAATNAGIASAGIDARLGEIG 267
[Close]
BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: A0A7S1UJH3_9STRA (Methionine aminopeptidase 2 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJH3_9STRA)

HSP 1 Score: 278 bits (712), Expect = 6.030e-90
Identity = 134/190 (70.53%), Postives = 158/190 (83.16%), Query Frame = 1 
Query:    1 RYGQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            RYGQTEPPTIP+ +LFE G  P GEI EHP + N FR TSEEKRA++ + +   YD  R+AAE HRQVRR+AQS+I+PGIKL +MC  LEEKNRELV+E GL  GI FPTGCSLNHVAAHYTPN GDDTVL +GDVMKVDFGTQ+ GRIIDCAWTV FDPQ++ L++A ++AT+TGI+ AGIDVPLNE+G
Sbjct:   53 RYGQTEPPTIPIAELFEAGKMPIGEIQEHPGEHNAFRTTSEEKRAQDNISFEE-YDNIRQAAECHRQVRRYAQSFIEPGIKLSEMCERLEEKNRELVQEAGLGRGIGFPTGCSLNHVAAHYTPNPGDDTVLSYGDVMKVDFGTQINGRIIDCAWTVYFDPQYENLVKAVQDATDTGIRCAGIDVPLNEIG 241
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BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Match: A0A662YCU7_9STRA (Peptidase_M24 domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YCU7_9STRA)

HSP 1 Score: 271 bits (692), Expect = 2.610e-88
Identity = 135/188 (71.81%), Postives = 151/188 (80.32%), Query Frame = 1 
Query:    7 GQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG 570
            GQTEPPTIPV  LF +G +P GEI+ HP DFNTFR TSEEKRA +R Q   LY+  R AAEVHRQVR+ AQ  +KPG+KLIDMCT LE KNRELV E G   GI FPTGCSLNHVAAHYTPN+GD+TVL +GDVMK+DFGTQV GRIID AWTV+FDPQFDPLLEAA+ AT  GI +AGID  L E+G
Sbjct:   86 GQTEPPTIPVAQLFPDGKYPVGEIVAHPGDFNTFRTTSEEKRALDREQ-EDLYESVRHAAEVHRQVRKFAQGLMKPGVKLIDMCTQLENKNRELVGEAGFARGIGFPTGCSLNHVAAHYTPNSGDETVLSYGDVMKLDFGTQVNGRIIDSAWTVAFDPQFDPLLEAAKMATEAGIASAGIDARLGEIG 272
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9224.20170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB38_ECTSI1.650e-12897.37Methionine aminopeptidase 2 n=1 Tax=Ectocarpus sil... [more]
A0A6H5KY83_9PHAE7.250e-12795.77Methionine aminopeptidase 2 n=1 Tax=Ectocarpus sp.... [more]
D8LB39_ECTSI2.580e-12695.79Methionine aminopeptidase 2 n=1 Tax=Ectocarpus sil... [more]
A0A6H5KM93_9PHAE2.200e-11267.41Methionine aminopeptidase 2 n=1 Tax=Ectocarpus sp.... [more]
A0A835Z307_9STRA5.150e-9474.48Methionine aminopeptidase 2 n=1 Tax=Tribonema minu... [more]
A0A7S2XZW7_9STRA5.440e-9473.68Methionine aminopeptidase 2 n=1 Tax=Fibrocapsa jap... [more]
W7U6D6_9STRA5.250e-9275.26Methionine aminopeptidase 2 n=2 Tax=Monodopsidacea... [more]
A0A3R7JX11_9STRA1.480e-9174.74Methionine aminopeptidase 2 n=3 Tax=Phytophthora k... [more]
A0A7S1UJH3_9STRA6.030e-9070.53Methionine aminopeptidase 2 n=1 Tax=Phaeomonas par... [more]
A0A662YCU7_9STRA2.610e-8871.81Peptidase_M24 domain-containing protein (Fragment)... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9224contigS-firma_M_contig9224:1155..4156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score382.1
Seed ortholog evalue1.5e-103
Seed eggNOG ortholog2880.D8LB38
KEGG koko:K01265
GOsGO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008277,GO:0009966,GO:0009987,GO:0010467,GO:0010646,GO:0016020,GO:0016485,GO:0016787,GO:0018193,GO:0018206,GO:0019538,GO:0022400,GO:0023051,GO:0031365,GO:0032101,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051604,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564
EggNOG free text desc.metalloexopeptidase activity
EggNOG OGsCOG0024@1,KOG2775@2759
Ec32 ortholog descriptionPeptidase M24, structural domain
Ec32 orthologEc-27_005350.1
EC3.4.11.18
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Exons4
Model size570
Cds size570
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9224.20170.1prot_S-firma_M_contig9224.20170.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9224 1155..4156 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828749.8699687-CDS-S-firma_M_contig9224:1154..13281622828749.8699687-CDS-S-firma_M_contig9224:1154..1328Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9224 1155..1328 -
1697105139.554548-CDS-S-firma_M_contig9224:1154..13281697105139.554548-CDS-S-firma_M_contig9224:1154..1328Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9224 1155..1328 -
1622828749.882386-CDS-S-firma_M_contig9224:2541..26611622828749.882386-CDS-S-firma_M_contig9224:2541..2661Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9224 2542..2661 -
1697105139.5675595-CDS-S-firma_M_contig9224:2541..26611697105139.5675595-CDS-S-firma_M_contig9224:2541..2661Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9224 2542..2661 -
1622828749.8947585-CDS-S-firma_M_contig9224:3434..35991622828749.8947585-CDS-S-firma_M_contig9224:3434..3599Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9224 3435..3599 -
1697105139.5786333-CDS-S-firma_M_contig9224:3434..35991697105139.5786333-CDS-S-firma_M_contig9224:3434..3599Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9224 3435..3599 -
1622828749.9072266-CDS-S-firma_M_contig9224:4045..41561622828749.9072266-CDS-S-firma_M_contig9224:4045..4156Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9224 4046..4156 -
1697105139.594764-CDS-S-firma_M_contig9224:4045..41561697105139.594764-CDS-S-firma_M_contig9224:4045..4156Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9224 4046..4156 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9224.20170.1

>prot_S-firma_M_contig9224.20170.1 ID=prot_S-firma_M_contig9224.20170.1|Name=mRNA_S-firma_M_contig9224.20170.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=190bp
RYGQTEPPTIPVDDLFEEGSFPEGEILEHPRDFNTFRITSEEKRAEERLQ
YAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVREN
GLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRII
DCAWTVSFDPQFDPLLEAAREATNTGIKTAGIDVPLNEVG
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mRNA from alignment at S-firma_M_contig9224:1155..4156-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9224.20170.1 ID=mRNA_S-firma_M_contig9224.20170.1|Name=mRNA_S-firma_M_contig9224.20170.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3002bp|location=Sequence derived from alignment at S-firma_M_contig9224:1155..4156- (Sphaerotrichia firma Sfir_13m male)
AGGTACGGACAGACAGAACCCCCGACTATCCCTGTGGACGATCTGTTCGA
AGAGGGATCTTTCCCGGAGGGCGAGATCTTGGAGCATCCCCGGGATTTCA
ACACGTTTCGGGTGAGGGAAGGGGGCGGTGTGTGGACGGGTAGAGGCTTG
GGTCGCACGTTCCGAGTGCATGAACACGCACGCAGTGCGTGTCTCATGTC
TAACCCACGGCGGACAACAAGGCACACAGGATAAGTCTGCGTACTTCGGA
TGTGCCAGCACAGGAAGAAAGACACAACGGCCGAGTTCTGACCAGCAGTG
GCAATGGTCACAAGGCTGCTACGGAGGATGCAAGTGCTCGAGCATCAGCA
CGAGACGGAAAGCAATGCTGGGGTGGCGTGGCGCTGTGCGAACGGCTGAC
CAAAAAGTGTTAGGTTTTTCGTCCGGAATAGATCGTTCACACGCGTTGGC
CGTACATACGTCAGCTTCTAGTGATACGCTGCTGTTTCCAGCATCCGCTT
ACTTTTGCTGTGGTGACCATCTCCCGATGTTTAAAAAAAAAAAAAAACGC
GCGATAGATAACTAGCGAGGAGAAGCGGGCGGAGGAGCGACTGCAATACG
CCGGGCTCTACGACAAGGCTCGCAAGGCGGCAGAGGTCCACAGGCAGGTC
AGGCGCCACGCCCAGAGCTACATCAAGCCCGGGATCAAGCTCATCGACAT
GTGCACCATGCTGGAGGAGAAGGTGCGCGAGCGAGTCCGCGTGCTTATGA
GACCGGTGTGCTGAAACTTAACCAACAAACCTAACGGATTGCGGATTTTT
TGCTGTTGGCTGGGACGGGGAGGGTTATTATCGTGTGTACACAACAGCAG
TCAGTACCCCTGGAACGACTTGTTCACAGGACGGACGTATACGGCTGACG
AATGTAGAAAATTTACTGAAAGATGGGGAGACGGAGAACGATGGGGAGGA
GGAAGGTTTATTACAGCACGGCACAACAGACACATGGGTAAGAGACACAT
CTGAACAGAGAAAATAGAAGCTACAGTATTATACTGCTGATCTTGTCGGG
TTTGGCGCACTGCTGGCGACGAAGCGGTTGAAACGCCCGTGGCCCGAAGG
ATAAACTTTGTCTCTTTTGTCTCTGTATCATAAATGCGCGGCTGTCTCGC
CTCTTGTTGCCACCCCCCCAAGTCCGTGCAAAAAGAGCTGGTGGCGGAAC
AAATAGGAAGAGAGCCTTGCCTGCCCGTGCCGCCGCCCCTCGCCGGGCAA
TTAGATGGGTACTGCTGACGCTCGATACATGTACGCTACTGTGGTGCCAA
GAACCAACACCAGCAAAGCCAGGGCAGCAACTGCGCCACAAGCTACGCAT
ACACTTGGCATTTCGTGAGAGAGGACGTATACTTGGTATTTCGTGAGAGA
GGACACGGTAGTTTCGGGCATGAGATAGAATGCATACATAGCTGATCGTA
TCGTGTGCTCCCCACTCGCTTGCCCTCGTTGTTGCCGCTCGGAAGAACCG
GGAGCTGGTGCGGGAGAACGGTCTCGACGCCGGCATCGCCTTCCCGACCG
GGTGCTCTCTCAACCACGTCGCGGCGCACTACACCCCCAACAACGGCGAC
GACACGGTGCTCAAGGTGCGTGCGCGCGGGAAAGTTTGGAATGCGAGTGC
GGAAACAGAGGCAGAGCAGCAGAGATAGCAGCGGCAGCGGCAGCAGCAGC
AGCAGCAGCAGCAGAGATAGCAGCGGCAGCGGCAGCAGCAGCAGCAGAGA
TAGCAGCAGCAGCAACAGCAGAGGCAGCAGCAGCAGCAGTAGCAGTAGCA
GCAGCAGCAGCAGCTGGGCTAACGCCCGCGGTTCTCCATGACGTCGGTTT
TTTACTTTGTAGTCGGTTGGTTATGCCAACCAACCACCGCCAAAGTCGCC
TGCGACGCTGCGTGTTCTTTGGATCAAGACCGCTGCGTGTTTGTACCGTT
TAGCTGCCGACGCTGATGCTGTAAAGCGGTGTGGGCAGTGTTGTATTGTC
CCCGGCGCAGCAGCGCGGGCGGAGTCAGAGGTGGCAAGCGCGCGCTGAGG
ATGTCCAAGGACGGCGGTGCAACGGTAGTGATCCATTCGATTCGGGTGTT
GTTTTGACTCGGGTCGGGTCGATTGTATTGTCCGCTCCGATTGAACTAGC
ATGCGGACGCGTGTGGTGTAGTGGTAACATAAGCGCCTTCCAAGCTCTTG
CCCAGGGTTCGATTCCCTGTACGCGTACCATGGTACAGAAGATATTCGGT
CAGCAGTAGTGGGAAACGACAAAGCCATGGTGGCAGCACGAAGCAACAGA
TAGTAGCGCTTTCTTGGGTGCCGGGGGTGCTCTTGAACCCCCATTAGTAA
CCCTCGCTTGTGCAGATTCTGTCGGCGTTGGCGTTTTTTGGGTGACTTGT
TTTTGTCGGGTGCCTGGTCTGCCCCCCAACGCGATTGTTAACGTGAGTTC
GTCCACTCTTCCGAGCCAAACTCCATCAAAACCTGCTTTTTGAAGTTGTG
AAAGGTTTTTCGTCTTCTCCTCCTCCTTTTTTCCCCCCAATGTTTTTTAA
TACATCTTCTACATTCGTCAACCGTATACGTCCGTCCTGTGAATAAGTCG
TTCCAGGGGGACTGTTGTATAGTCTACACGTCCCAGCCAACAGCACAAAA
TCCGCAATCCGTTAGGTTTGTTGGTTGTTTAGCTTCTTAGTTTGCAAGGG
GGTATGTTATTCAGCGTATATTTTTTGTCGCGATCTCTCGGTCTTGGGGC
TTTCCGCTTTCCACTCAACCCGCTCTCCCTCTCTGTGTACTGTTGTATAT
TTTATCCCGTCCGTCTGTCATGTCACAGCACGGGGACGTGATGAAGGTTG
ACTTCGGCACCCAGGTAGAAGGCCGCATCATCGACTGCGCCTGGACGGTC
AGCTTCGACCCCCAGTTCGACCCGCTGCTAGAGGCCGCACGAGAGGCCAC
CAACACCGGCATCAAGACCGCCGGCATCGACGTCCCGCTCAACGAGGTGG
GT
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Coding sequence (CDS) from alignment at S-firma_M_contig9224:1155..4156-

>mRNA_S-firma_M_contig9224.20170.1 ID=mRNA_S-firma_M_contig9224.20170.1|Name=mRNA_S-firma_M_contig9224.20170.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1140bp|location=Sequence derived from alignment at S-firma_M_contig9224:1155..4156- (Sphaerotrichia firma Sfir_13m male)
AGGTACGGACAGACAGAACCCCCGACTATCCCTGTGGACGATCTGTTCGA
AGAGGGATCTTTCCCGGAGGGCGAGATCTTGGAGCATCCCCGGGATTTCA
ACACGTTTCGGAGGTACGGACAGACAGAACCCCCGACTATCCCTGTGGAC
GATCTGTTCGAAGAGGGATCTTTCCCGGAGGGCGAGATCTTGGAGCATCC
CCGGGATTTCAACACGTTTCGGATAACTAGCGAGGAGAAGCGGGCGGAGG
AGCGACTGCAATACGCCGGGCTCTACGACAAGGCTCGCAAGGCGGCAGAG
GTCCACAGGCAGGTCAGGCGCCACGCCCAGAGCTACATCAAGCCCGGGAT
CAAGCTCATCGACATGTGCACCATGCTGGAGGAGAAGATAACTAGCGAGG
AGAAGCGGGCGGAGGAGCGACTGCAATACGCCGGGCTCTACGACAAGGCT
CGCAAGGCGGCAGAGGTCCACAGGCAGGTCAGGCGCCACGCCCAGAGCTA
CATCAAGCCCGGGATCAAGCTCATCGACATGTGCACCATGCTGGAGGAGA
AGAACCGGGAGCTGGTGCGGGAGAACGGTCTCGACGCCGGCATCGCCTTC
CCGACCGGGTGCTCTCTCAACCACGTCGCGGCGCACTACACCCCCAACAA
CGGCGACGACACGGTGCTCAAGAACCGGGAGCTGGTGCGGGAGAACGGTC
TCGACGCCGGCATCGCCTTCCCGACCGGGTGCTCTCTCAACCACGTCGCG
GCGCACTACACCCCCAACAACGGCGACGACACGGTGCTCAAGCACGGGGA
CGTGATGAAGGTTGACTTCGGCACCCAGGTAGAAGGCCGCATCATCGACT
GCGCCTGGACGGTCAGCTTCGACCCCCAGTTCGACCCGCTGCTAGAGGCC
GCACGAGAGGCCACCAACACCGGCATCAAGACCGCCGGCATCGACGTCCC
GCTCAACGAGGTGGGTCACGGGGACGTGATGAAGGTTGACTTCGGCACCC
AGGTAGAAGGCCGCATCATCGACTGCGCCTGGACGGTCAGCTTCGACCCC
CAGTTCGACCCGCTGCTAGAGGCCGCACGAGAGGCCACCAACACCGGCAT
CAAGACCGCCGGCATCGACGTCCCGCTCAACGAGGTGGGT
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