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Homology
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: D7FIT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT7_ECTSI) HSP 1 Score: 406 bits (1043), Expect = 2.570e-136 Identity = 197/237 (83.12%), Postives = 214/237 (90.30%), Query Frame = 1
Query: 127 MITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFSGALPPREVEKFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEVFEPDPIPPHQTLRCVRVRRGVNKCTLRPKGEVHTRTDYLRMRRGHMHAHNKVPG 837
++ PPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREH+AQLVP+RAELYREEAVTVS QQVAQVL+IL DK+RLPALVHCPDGRVL GVVLWCLRRLQCWDDRASAAEFARFSG LP REVEKFV S+GEEVTVP +VPRWLWGGDRAHWHP IR+RHQPPLEVFEPDP+P QTLR RR + K + +GEV+TRTDYLR+RR +MHA NK+PG
Sbjct: 3 IVPPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHSAQLVPVRAELYREEAVTVSCQQVAQVLSILADKDRLPALVHCPDGRVLSGVVLWCLRRLQCWDDRASAAEFARFSGVLPSREVEKFVESYGEEVTVPANVPRWLWGGDRAHWHPCIRIRHQPPLEVFEPDPLPSQQTLRLGETRR-LRKPS---RGEVYTRTDYLRVRRDYMHAKNKIPG 235
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: A0A6H5JCL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL7_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 2.290e-130 Identity = 195/256 (76.17%), Postives = 212/256 (82.81%), Query Frame = 1
Query: 127 MITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFSGALPPREVEKFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEVFEPDPIPPHQTLRCVRVRRGVNKCTLRPKGEVHTRTDYLRMRRGHM--HAHNKVP---------GVIGADGLG 861
++ PPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREH+AQLVP+RAELYREEAVTVS QQVAQVL+IL DK+RLPALVHCPDGRVL G VLWCLRRLQCWDDRASAAEFARFSG LP REVEKFV S+GEEVT+P +VPRWLWGGDRAHWHP IR+RHQPPLEVFEPDP+P QTLR GEV+TRTDYLR+RR +M +A NK+P G +GA G G
Sbjct: 3 IVPPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHSAQLVPVRAELYREEAVTVSCQQVAQVLSILADKDRLPALVHCPDGRVLSGAVLWCLRRLQCWDDRASAAEFARFSGVLPSREVEKFVESYGEEVTIPANVPRWLWGGDRAHWHPCIRIRHQPPLEVFEPDPLPSQQTLR----------------GEVYTRTDYLRVRRDYMNMYAKNKIPEGAGGRRGGGSVGARGQG 242
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: A0A836CAP9_9STRA (Tyrosine phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP9_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.010e-54 Identity = 108/230 (46.96%), Postives = 140/230 (60.87%), Query Frame = 1
Query: 127 MITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFS-GALPPREVEKFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEVFEPDPIPPHQTLRCVRVRRGVNKCTLRPKGEVHTRTDYLRMRRGHM 813
++ PP +FG VE DVFRS PTLKN R+L+RLKL+T+V+I PE P++D FCRE +L+ + A+ Y+EE +TV+ QQVAQ+L+ LVD RLPALVHC DG + G V+ CLR+LQ W + E +++ G REV KFV F EEVTV +VP WLW G R HP IR+RH PPLE Q L + K + R+D +R RR HM
Sbjct: 13 LVIPPSKFGLVEQDVFRSGHPTLKNLRYLTRLKLKTMVAIVPEEPLKDLCDFCREQDIELLHVAADKYKEEGMTVTPQQVAQILSALVDPQRLPALVHCLDGGAVTGTVIMCLRKLQGWSWAGLSEESRKYTAGRGMHREVNKFVQDFTEEVTVGAAVPPWLWQGQRERLHPAIRLRHDPPLEEAREGGAKDGQALH-----EEIQKTLAQ------ARSDNIRWRRVHM 231
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: A0A024G700_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G700_9STRA) HSP 1 Score: 164 bits (415), Expect = 5.440e-43 Identity = 80/178 (44.94%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 130 ITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFSG--ALPPREVEKFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRH 657
+ PPFRF VE V+R + PTLKN+RFL RLKL+T+VSI PE P D FC+E AE Y + VTVS +Q++ IL+D+++ P +HC DG + G+V+ LR+LQ W A+ +EF RF+ ++ E E ++A+F EE+ VP +P WLWGG H HPT+ +RH
Sbjct: 7 LIPPFRFNIVELLVYRGSYPTLKNFRFLKRLKLKTIVSITPESPSSDVLEFCQEEGITHYQFLAEKYSSDNVTVSPAIASQIVHILIDQSKFPIYIHCLDGSNVTGIVIMILRKLQNWTKVATISEFCRFTRDHSIEKNESE-YLATFCEEIVVPSKIPGWLWGGHCIHKHPTLVIRH 183
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: A0A8K1FLW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLW5_PYTOL) HSP 1 Score: 159 bits (402), Expect = 3.780e-41 Identity = 76/183 (41.53%), Postives = 115/183 (62.84%), Query Frame = 1
Query: 130 ITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFSGALP-PREVEKFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEV 675
+ PPFRF +V+ ++R + PTLKN+RFL RL+L+T+VS+ PE P D FC++ AE + + VTVS VAQ+L +++ + LP +HC DG + G+++ LR+LQ W A+ +EF RF+ ++ ++++SF EE+ VP VPRWLW G R HPT+ + HQP LE+
Sbjct: 8 LIPPFRFSSVQHQLYRGSYPTLKNFRFLRRLQLKTIVSVIPEPPTADLVEFCQQEKITNYHFCAEKFTSDNVTVSPSMVAQILQLMIKQENLPLYIHCLDGANVAGIIIMVLRKLQNWTKVATVSEFCRFTRDHGIEKDESEYLSSFSEEIVVPADVPRWLWNGIRITKHPTMII-HQPDLEM 189
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: A0A2D4CE66_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CE66_PYTIN) HSP 1 Score: 157 bits (396), Expect = 2.850e-40 Identity = 75/183 (40.98%), Postives = 115/183 (62.84%), Query Frame = 1
Query: 130 ITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFSGALP-PREVEKFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEV 675
+ PPFRF +V+ ++R + PTLKN+RFL RL+L+T+VS+ PE P D FC++ AE + + VTVS VAQ+L +L+++ LP +HC DG + G+++ LR+LQ W A+ +EF RF+ ++ +++++F EE+ VP VP+WLW G R HPT+ + HQP LE
Sbjct: 8 LIPPFRFSSVQHQLYRGSXPTLKNFRFLRRLQLKTIVSVIPEAPTSDLVEFCQQEKIANHHFYAEKFTSDNVTVSPATVAQILXLLINQENLPLYIHCLDGANVTGIIIMILRKLQNWTKVATISEFCRFTRDHGIEKDESEYLSTFSEEIVVPTDVPKWLWNGIRILKHPTMII-HQPDLET 189
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: H3HBF1_PHYRM (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=H3HBF1_PHYRM) HSP 1 Score: 156 bits (394), Expect = 5.630e-40 Identity = 81/186 (43.55%), Postives = 111/186 (59.68%), Query Frame = 1
Query: 121 AVMITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFSGALP-PREVEKFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEV 675
A + PPFRF V+ ++R A PTLKN+RFL RL L+TVVS+ PE P D A FC L AE + + VTVS AQ++ ILV +LP +HC DG + G+V+ LR+LQ W A+ +EF RF+ ++ +++A+F EE+ V P+WLW G R HPT+ V HQP LE+
Sbjct: 5 APALIPPFRFSTVQQGLYRGAYPTLKNFRFLRRLGLKTVVSVIPEPPTSDLADFCASEKIALHHFYAEKFTSDNVTVSPATAAQIIEILVQNKKLPLYIHCLDGSNVTGIVVMILRKLQNWTKLATVSEFCRFTRDHGIEKDESEYLAAFSEEIVVTADAPQWLWNGVRVTKHPTMIV-HQPDLEL 189
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: A0A662X7W3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7W3_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.140e-39 Identity = 82/186 (44.09%), Postives = 111/186 (59.68%), Query Frame = 1
Query: 121 AVMITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFSGALPPREVE-KFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEV 675
A + PPFRF V+ ++R + PTLKN+RFL RL L+TVVS+ PE P D FC + L AE + + VTVS AQ+L I+V + LP VHC DG + G+V+ LR+LQ W A+ +EF RF+ + E +++A+F EE+ V PRWLW G R HPT+ V HQP LE+
Sbjct: 5 APALIPPFRFSTVQQGLYRGSYPTLKNFRFLRRLALKTVVSVIPEPPTTDLTGFCAQEKIALHHFYAEKFTSDNVTVSPATAAQILEIIVQQKNLPLYVHCLDGANVTGIVVMVLRKLQNWTKLATVSEFCRFTRDHGVEKDESEYLAAFSEEIVVTADAPRWLWNGVRITKHPTMIV-HQPDLEL 189
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: W2N4G1_PHYPR (Uncharacterized protein n=13 Tax=Peronosporaceae TaxID=4777 RepID=W2N4G1_PHYPR) HSP 1 Score: 155 bits (391), Expect = 1.500e-39 Identity = 80/186 (43.01%), Postives = 111/186 (59.68%), Query Frame = 1
Query: 121 AVMITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFSGALP-PREVEKFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEV 675
A + PPFRF V+ ++R A PTLKN+RFL RL L+T+VS+ PE P D A FC + AE + + VTVS AQ++ ILV K LP +HC DG + G+V+ LR+LQ W A+ +EF RF+ ++ +++A+F EE+ V P+WLW G R HPT+ V HQP LE+
Sbjct: 5 APALIPPFRFSTVQQGLYRGAYPTLKNFRFLRRLGLKTLVSVIPEPPTSDLADFCANEKITQLHFYAEKFTSDNVTVSPATAAQIVEILVQKKNLPLYIHCLDGSNVTGIVVMILRKLQNWTKLATVSEFCRFTRDHGIEKDESEYLAAFSEEIVVTADAPQWLWNGVRVTKHPTMIV-HQPDLEL 189
BLAST of mRNA_S-firma_M_contig922.20166.1 vs. uniprot
Match: A0A0P1AVY4_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVY4_PLAHL) HSP 1 Score: 154 bits (388), Expect = 3.990e-39 Identity = 80/184 (43.48%), Postives = 110/184 (59.78%), Query Frame = 1
Query: 130 ITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEAMFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCPDGRVLCGVVLWCLRRLQCWDDRASAAEFARFSG--ALPPREVEKFVASFGEEVTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEV 675
+ PPFRF ++ ++R A PTLKN+RFL RL L+T+VS+ PE P D FC L+ AE + + VTVS VAQ++ IL+ K LP +HC DG + G+V+ LR+LQ W A+ +EF RF+ A+ E E ++ +F EEV V P WLW G R HPT+ V HQP L++
Sbjct: 8 LIPPFRFSTMQHGLYRGAYPTLKNFRFLRRLGLKTMVSVIPEPPTSDLVAFCTSERITLLHFYAEKFTSDNVTVSPATVAQIIEILIQKKNLPLYIHCLDGANVTGIVVMILRKLQHWTKLATVSEFCRFTRDHAIEKNESE-YLTTFSEEVVVTADAPLWLWNGMRLTKHPTMIV-HQPDLDL 189
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 409.1 |
| Seed ortholog evalue | 2.3e-111 |
| Seed eggNOG ortholog | 2880.D7FIT7 |
| Preferred name | OCA6 |
| KEGG ko | ko:K18046 |
| GOs | GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 |
| EggNOG free text desc. | protein tyrosine phosphatase activity |
| EggNOG OGs | COG2365@1,KOG1572@2759 |
| EC | 3.1.3.48 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01009 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Protein-tyrosine phosphatase-like |
| Ec32 ortholog | Ec-20_002960.1 |
| Exons | 9 |
| Model size | 1732 |
| Cds size | 1152 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622828749.3526905-UTR-S-firma_M_contig922:9753..9879 | 1622828749.3526905-UTR-S-firma_M_contig922:9753..9879 | Sphaerotrichia firma Sfir_13m male | UTR | S-firma_M_contig922 9754..9879 + |
| 1697105139.159579-UTR-S-firma_M_contig922:9753..9879 | 1697105139.159579-UTR-S-firma_M_contig922:9753..9879 | Sphaerotrichia firma Sfir_13m male | UTR | S-firma_M_contig922 9754..9879 + |
| 1622828749.4861877-UTR-S-firma_M_contig922:15962..16416 | 1622828749.4861877-UTR-S-firma_M_contig922:15962..16416 | Sphaerotrichia firma Sfir_13m male | UTR | S-firma_M_contig922 15963..16416 + |
| 1697105139.2902231-UTR-S-firma_M_contig922:15962..16416 | 1697105139.2902231-UTR-S-firma_M_contig922:15962..16416 | Sphaerotrichia firma Sfir_13m male | UTR | S-firma_M_contig922 15963..16416 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622828749.3666704-CDS-S-firma_M_contig922:9879..9971 | 1622828749.3666704-CDS-S-firma_M_contig922:9879..9971 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 9880..9971 + |
| 1697105139.1800876-CDS-S-firma_M_contig922:9879..9971 | 1697105139.1800876-CDS-S-firma_M_contig922:9879..9971 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 9880..9971 + |
| 1622828749.3791704-CDS-S-firma_M_contig922:11212..11366 | 1622828749.3791704-CDS-S-firma_M_contig922:11212..11366 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 11213..11366 + |
| 1697105139.1925495-CDS-S-firma_M_contig922:11212..11366 | 1697105139.1925495-CDS-S-firma_M_contig922:11212..11366 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 11213..11366 + |
| 1622828749.3967743-CDS-S-firma_M_contig922:12339..12510 | 1622828749.3967743-CDS-S-firma_M_contig922:12339..12510 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 12340..12510 + |
| 1697105139.205369-CDS-S-firma_M_contig922:12339..12510 | 1697105139.205369-CDS-S-firma_M_contig922:12339..12510 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 12340..12510 + |
| 1622828749.4097245-CDS-S-firma_M_contig922:13075..13185 | 1622828749.4097245-CDS-S-firma_M_contig922:13075..13185 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 13076..13185 + |
| 1697105139.2178738-CDS-S-firma_M_contig922:13075..13185 | 1697105139.2178738-CDS-S-firma_M_contig922:13075..13185 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 13076..13185 + |
| 1622828749.4215884-CDS-S-firma_M_contig922:13675..13783 | 1622828749.4215884-CDS-S-firma_M_contig922:13675..13783 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 13676..13783 + |
| 1697105139.2271428-CDS-S-firma_M_contig922:13675..13783 | 1697105139.2271428-CDS-S-firma_M_contig922:13675..13783 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 13676..13783 + |
| 1622828749.4340181-CDS-S-firma_M_contig922:14137..14317 | 1622828749.4340181-CDS-S-firma_M_contig922:14137..14317 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 14138..14317 + |
| 1697105139.2382321-CDS-S-firma_M_contig922:14137..14317 | 1697105139.2382321-CDS-S-firma_M_contig922:14137..14317 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 14138..14317 + |
| 1622828749.4474611-CDS-S-firma_M_contig922:14643..14722 | 1622828749.4474611-CDS-S-firma_M_contig922:14643..14722 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 14644..14722 + |
| 1697105139.2516222-CDS-S-firma_M_contig922:14643..14722 | 1697105139.2516222-CDS-S-firma_M_contig922:14643..14722 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 14644..14722 + |
| 1622828749.4621792-CDS-S-firma_M_contig922:15386..15449 | 1622828749.4621792-CDS-S-firma_M_contig922:15386..15449 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 15387..15449 + |
| 1697105139.2650268-CDS-S-firma_M_contig922:15386..15449 | 1697105139.2650268-CDS-S-firma_M_contig922:15386..15449 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 15387..15449 + |
| 1622828749.4742885-CDS-S-firma_M_contig922:15767..15962 | 1622828749.4742885-CDS-S-firma_M_contig922:15767..15962 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 15768..15962 + |
| 1697105139.2766333-CDS-S-firma_M_contig922:15767..15962 | 1697105139.2766333-CDS-S-firma_M_contig922:15767..15962 | Sphaerotrichia firma Sfir_13m male | CDS | S-firma_M_contig922 15768..15962 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig922.20166.1 >prot_S-firma_M_contig922.20166.1 ID=prot_S-firma_M_contig922.20166.1|Name=mRNA_S-firma_M_contig922.20166.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=384bp
MITPPFRFGAVEADVFRSAQPTLKNYRFLSRLKLRTVVSIAPEGPMEDEA MFCREHAAQLVPIRAELYREEAVTVSSQQVAQVLAILVDKNRLPALVHCP DGRVLCGVVLWCLRRLQCWDDRASAAEFARFSGALPPREVEKFVASFGEE VTVPQSVPRWLWGGDRAHWHPTIRVRHQPPLEVFEPDPIPPHQTLRCVRV RRGVNKCTLRPKGEVHTRTDYLRMRRGHMHAHNKVPGVIGADGLGGGGGV GGRGQGASSAAGSSGAVSSSARRRPSAHHGQTASSALSGQDSFSQSIQDV SIGMLMEEEEGPKLSRAVQALSLEGLDGTSYDDEEDTVYEHHHHHHHHHH QPQHRHSSRVSASHNSRIRRGGGGIGSMGGSHS* back to topmRNA from alignment at S-firma_M_contig922:9754..16416+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-firma_M_contig922.20166.1 ID=mRNA_S-firma_M_contig922.20166.1|Name=mRNA_S-firma_M_contig922.20166.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=6663bp|location=Sequence derived from alignment at S-firma_M_contig922:9754..16416+ (Sphaerotrichia firma Sfir_13m male) CTTGGCAATATCGTTGGGGAGTAGGCGGACACAAGCGGGCAAAAAGGCCT
ACATCGTCAGGATTGCCTCAGCCTATACTAGCAGAGAGAGGAGAGAGGGC
GAAAGAGGGCGAAAAAGAAAGCGGTCATGATTACGCCGCCTTTTCGGTTC
GGAGCGGTCGAGGCAGATGTGTTCCGGTCCGCGCAGCCGACGCTCAAGAA
CTATCGCTTCCTCTCCAGGTGAGGAAGTACAATGTCTGCACCAGTCTCTG
TCGGTATGTTGTTGTTTGCGTCTCGTCTAGACGTCTAGACTACTGATTCC
CTATTCTGTATACAGAAAGTTTGAAGCCTGAGCTGGTTTCACAAATTTGA
ACTTTTGAATGGATCCACAGCGACGGCACATGATATCATGCGTCGGCGTC
GGTTCTGATCTGGTACAGGCTATGTGTAGTCTACGTGTACCTGCTGTTAG
AGTTGCATTTTTCATCTCGGCACGTTGGGTTCCCATTTGGTTCAGCCATT
AATCAAGGTAACGGGAAGATTTATCCGAACACCCCCCCTGATTTACGGGT
GGACTACAGCAGAGAAGAGGCTACCTTCGAGACTACCTGGTACTTGGGTA
CAGCAGACTTGCAACCGCCCTCTCTCATTTTGCATATTTTGGAGAATGCA
CGTTCCCTCATCTGCAAAACAGCAACACAGAGCTCCGAGTGGTCTCTTTC
CTGCGCACAGACTGAGCTAGAGAGGATGCAAGACAGATATTAAATGGCTC
CTCGAAGCTACAGCAGTAGTAGGGGCAGGACAACAGCATCAAGTTCGGAG
AGGCAGGCGGAGGTTGCGGTCCAAAAACGATTTGGGGTCATGCGAATGGA
ATTGACGATCCCGAGCACCTTTGCCGTTGACCATCTCTTACGCCTCAAGC
TCGACAAGCGCTGCGTGAAAGATGTGCTGGAACAACCACGAAGTCGTCAG
TTCGTGTCAGCGTGACAGACAAGGCGTGGTTTTTTTAAGGTTCATGGACA
CACAGCAGCAGGCCGTTTTTCTTCTCCATATTTACAAAGGTTGGGACTGC
TGTTGCAAACCACCGATTGCTACCAAGCGGTCAGACAATGTTTGACTCCG
AATCCCGTTTGCCACCGCCGTTCCATCCCATTCGCTGACACCGGCTGTGC
ATACATGCGACGCTCGTCGATCCAACCCTACCCCTTCTCCATGCCTCTCG
GGCGCGATTTCCACCACCGCAAAGGAGCACAAAAATTCGAAAAACGACTC
CGCCGCCACCGCGTAGTATGTCTAAACCCTCTTGCGGATCGATGTTGGAT
AGAATATTCTGTAGAATGAAGAAGCTGCCTTGTTTAGCTGAGTCACAAGC
GAACGAACTACCGTGGAGTTAGTCTACAACTACGGCAATATTTTCATGGC
GAATTCTCTCTGCGCAGGAAACACGCCCATGCACAATTGCGCACTTTCCT
TGCCCGCAGGTTAAAGCTTCGCACGGTGGTGTCCATTGCCCCGGAAGGGC
CGATGGAGGACGAGGCGATGTTCTGCAGGGAGCACGCGGCACAACTCGTG
CCGATTCGCGCGGAGCTGTACCGTGAGGAGGCGGTGACGGTTTCGTCCCA
GCAGGTGGCGCAGGTGCAATCTGAATGGGGAGGGATTGTTGTGAGTGGGT
TCGCCGGCTACCTTTTTGGGCTCCTTAGGATGGTGTTTTCTTGTGTCTTT
GTTTGCTTGGCGGCAGGCACCGCATGCGCGGTAGGTGGGGGTTTGGTGAT
GTGTTGTGTTGTTGTATCCCACGCTTTCTGCCGCCCCCCTGTGAGAATAC
ATTGCGCCCCCCGACTGCTGCTGCTGCTGCTGCTGCTGCGGCTGCTGCCG
TCGCCGCCGCCGCCGTTCGCATTTAGGAAAGCGAATGACGTCAGGATGTA
TATATTTTTAGCAGTGTAGTCCGCCTCACCATCTTCGACACGAACACGTC
GAACGTCAAATCTGCGGCACAAAGTACTTTCACATTTTCATGTTGGTGGC
GACCCAAATGCATCTGACGCGCGCGCCCACACGAATGAGAACGAGAACGA
GAATACAGCGATCGATCGATTCGACCAACGGTTTCGTTTCGTTCCGCTTC
GTTTCGTTTCGTGGGTCGTGCAGCGCGGTGCTATCGTACCTGCTGTTGTC
CTTCGCTTAAGCTGTGGTTGTTGCCGCTCAAGCGGCAGAGTCAGAATGCG
CAGAATGTGTTTTAGCCCGTATTGTACTGGTCCGCAGCAGCAGCAGCAGC
GACAGCGGCAACGGCGACAACGACAACGAATGATGTGTTGTCGTATTTGT
ATCGTGCCCCAACAGCAGCACTTGCACCGCTGAGGAAAACGTGGCTTCTT
CCTCCATCCATCCAAGGACAGCAGAGCTTGCCCCCGTAAATATTCAAAAC
ACTTCTCATGTATGTACCCGCCCGCGCTTCCCGTCTACCACGTCGTTCGA
CCCCTTTTTTTGTGACCCGTGACTGGCTGGCTGTCGCTAAAAAAAAACGG
TCTTCTCTCTTTTTTTTCTCCTCTTCTCTCTTCGCGTGTTTCTCTCGGCA
AACCGTATCTATACCCCCCGGGGGTGGGCGAGAAAGGTGCTGGCTATCCT
CGTGGACAAGAATCGCCTGCCCGCGCTCGTCCACTGTCCCGACGGCCGGG
TGCTGTGCGGGGTCGTGCTCTGGTGCCTCAGGCGGCTGCAGTGCTGGGAC
GACCGGGCGTCGGCGGCGGAGTTTGCAAGGTTTTCCGGCGCTCTGCCTCC
GCGAGAGGTACGTAGGTGGTGGTGAAATGTTTGTACATCGATGCCCTGTA
TGTTTGCGTTGCACTAGACTAAAAAGTACATTGGGGAAGGGTGTTCTTGT
ATGATGGTGGCGTTTGATTGGGGGTAATGCGGCGACAGAACTTGTTCTCT
GTTTTTGGTGAGATTGGTTGTGAGACATTGACCCTCGTTTTTGAGGGGTT
TTTTTGGCGTTGCTTGAGGTGCGCATGCGTGCATGCGCGATGAAAAGTTG
CTGCCAATTTCGCGTTTTGTCTTCTGATCGGCCGTTTTTGGCAGAGATGC
GGCTCGTTCGCTGCAAGTTTAGCCATAATACAGTGGATCCTAATTATTGA
GAAAATAACATTTTAGCTTGAGAAAATAAAGTGTACACCACCGTCGCACA
AAACACCGAATGATTTATTTCGCGGCGAACTAGAATCGACCCGTTGCTGT
CACTGCTATGCTCCACATCATCACTGAGAGTGATCAGCAGGTAGTTGGCA
TCAGCAGGTATTATGCCAGAATGCAAGCTGAACCCGCGCGCTGTCTTTCC
CGTATTTTTTTGGCTTGCTCAGGTTGAAAAGTTCGTGGCGAGTTTTGGGG
AAGAGGTCACCGTCCCACAGAGCGTGCCACGATGGCTGTGGGGGGGAGAC
AGAGCACACTGGCATCCCACCATCCGAGTCCGGTGCGATGAAAACTAGAC
AGCTGTTGCGTACTGCTGTCGGCGCACGGAGCACACAACGTGCACACATC
GTTTTCCTGCGTCGATCAGGTGGCTTTCCCTCCGCCGCTCTTCTCTCTTC
TTTTTTGTTGTATTTCTTTGTAGTATCATCGACGTGAGCAGTCTACGTCC
AACCTTTGACAAAATAACAGTGTATTTTCCGACCGGGACTGTTGTAGACA
TGTAACCCTCCCTCACCGTCCCCCGGCTAAATACAACGGCAAAGTTGTTC
AATTTTTTTCTACAAAACGTCAGTGGTATTCGCCCGACCTGTGAACAACT
CGTTCCAGGGGGACTAATGTTGTACACCAATACACAACCGCCCCAGACAA
CAAGCACGAAAGAGGCAATCCGTACAATTGAGTTAAAGAGTTTTGGGGGT
CTTGTGGGCGCTTTTTTCGTTTGTTTGCGGCGACTGATTTTTTCCTCGCC
GTCCGTCTCTCGCCTCGACCAGGCATCAGCCACCGCTTGAGGTGTTCGAG
CCGGACCCAATCCCTCCCCACCAAACTCTCAGGTGCGTTCGTGTGCGGCG
TGGTGTGAATAAATGCACTCTGCGTCCGAAGTTATACAGTACATATGCGA
CTTCGTTGCTCTTTTGAACTTGAAGTTTGTTTTGCCTGGCCTCAGGTAAT
TTAGCTGCTTGCTTTTGGTTCATTCTGTCGCGGAATCCAGTCGCTGCTGC
TGCTGCTGCTGCTGCTGCTGTAGTCGCGGCCGTGGGGGTCTCGCTCCCTC
TTCTTCTTGTGTTTTGCCCTTTGCCAAGATGCCGGCGCAGAAGCGGGGCC
TGCCACCCCACCCGCATCTCACGAGGACACCGATGCCGGTTTCTTTCAAT
TTTCTTCTTGTTCTTGGGCTGGCTCAAAACATTTTCCTTCCATCGCGGTG
TATGTATGTGTGTGTCACTTCTCACGAAAAAAAGGGGCGAAGTCCACACA
AGAACAGACTACCTTAGGATGCGCAGGGGCCACATGCACGCCCACAACAA
GGTCCCCGGGGTGATCGGCGCGGACGGGCTGGGTGGAGGCGGAGGCGTCG
GCGGCCGGGGACAGGGGGCTTCTTCGGCCGCGGGCAGCTCCGGGGCCGTC
TCCTCCTCGGCGAGGTGAGTGTGTATGATCGCTAATTATTTCTGCGATTT
AAGTCTTCGCCGTTTTCTTTGGCTCGGCATTGGGGGACGAGTCAACAAGC
GTGTCATGACCTTCTTTTTCCTGGCGACGGATGAAGGGTTTCGTCCAGCG
TATTTTGTTTCGGCCAAGCCAAGGGTTTCCGTTGGCTGAGCCAATGTCTC
GCCCCAAAGATCCGTTGGTTCTCTCTCCCTCACACACACACACTCTCCCG
GTTCGGTCTAACTTTTTTCGTTTTTGTGTTTCCTTGCTTCCGGCTCGCTC
GCGGGGGGACCGCAACGCGGGGCGGGCGGGGGGGGTACAGAAGAAGACCT
TCGGCTCATCACGGCCAGACAGCCTCAAGCGCATTGTCTGGTCAGGACAG
CTTCAGCCAAAGCATTCAGGCGAGCACAGCACAGCACGTGCCTCGGCTTG
GCTTGTTTTGGTTTGATTTGGACCAATGTGTAGGTGTATTTAAATTCTTT
GTCGTGGCGCGACTGGCCTATCGCTTGTGGAACACGCACACGAATTTCTC
GAGCAAAGGTGGAAGATGGAAAATGAGGCAAGGAAGCCTGGGCTTTTTGT
TCCGTGGAATATTGAGGAAATACCATTTTGCGACCTAACCGTTTGTAAAT
ATGCCTAACTTTTCCCTTGAACTATCCCCTGAGGTGCGACAGGCATGGAT
CACACGCTTTCCCTCTCTGTATGATACTACTACTGCTGCGATCAGCTTTT
CCCTACCCACCAAGGCGAAAGCGAAAGCCCGGGGGGATACGGGGATACTT
TAGTCCAAGTTGAGGCACAGCAGTATTAACATTATTGATCACGCAACGAA
TCGAACGGCACGATTTTGGACACAGCACATTCGGGCACGGGTGGGCAACC
GTGCTGGATTTCGGTGTTTTTTTTTTTACAACGTTGAGGATCCTGATGAC
ACCATCGCTTTGAAATGGTTGGTACTCTCCGTGCGGCGAGTGTTCGATGG
CCGAAGTCCGCTTCCTTTGACAGCGAGTACATGTGCGTTTTCCGTTCTTT
CTCTTTCGACACTTGACACCAAATGCGGCGCAGGACGTGAGTATCGGCAT
GCTCATGGAGGAGGAGGAGGGGCCCAAGCTGTCCAGAGCGGTGCAGGTAA
GGGGCGGGCTCTCACGAGATGCGTAACCTTCCAGCCATGACGTGTGTATC
GACGGCGAGAACAGCGACCGTCGTACGTGTAGACGCGAACAACAAAGCAC
GCAGCCGTTCGCCCTCCTTCGAGTTCCTCACCTCCCTCATGCAGCGAGCG
GCAGATGCCTGTAGTCTACGTACCGGGTGGTTTCTCCGCCGACACCGTTT
TTCGCTTTTCGTGTCGTTTCCGGGACTCACCTTTTCGTGGCTTGTGTTTT
CGTATTTGTCGTCACCCCACAAATGCAACAACGACAACAACGACGACCAC
AACAACAACAACAGGCGTTGTCCCTCGAAGGTCTAGACGGGACTTCCTAC
GACGACGAAGAAGACACGGTCTACGAGCACCACCATCATCACCACCACCA
CCACCACCAGCCGCAGCACCGACACTCGTCTAGGGTCAGCGCCAGCCACA
ACAGCCGAATCCGCAGGGGGGGGGGCGGGATTGGCAGCATGGGGGGAAGC
CATTCGTGAAGGCTAAATTAGCCTGTGATCGCAATGGAGTCATGAAGGGT
TGGGCCACCCAAGGACTGTGATGTAATTTATCACACACCCTCTGTTTGGT
CTTTGCTGGGGTTTCGTCAAAGTAAAGCAAGCACGGAGGTGAATCGAGGA
CCAATTTTAGGCACCAGTTGCCCTGAAATAAAATGCACTTAAGCACGTTT
TTATTCTCCTTTTCCGTCGAGTTTTAGACAACGGGGTCGGCAATGCAATT
TGACATCGTAACTCGGACGGAAACGGTGGTGTCGTTGATTTGCACGATGT
AAAGTGAAGCGGGCGCGTGACTCCGCCGCTATTTACAGTAGCTGTTCCGG
GCAGTATTTGGCAGGATGCTCATAGGATTGATTCCATTCGATTGCTCAAC
ACGAGGCACTCGTGAAACAAGTTTTGCCTGAAAAAGAGCGGGCCGTCGGC
AACAAGAAGCAGT back to topCoding sequence (CDS) from alignment at S-firma_M_contig922:9754..16416+ >mRNA_S-firma_M_contig922.20166.1 ID=mRNA_S-firma_M_contig922.20166.1|Name=mRNA_S-firma_M_contig922.20166.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=2304bp|location=Sequence derived from alignment at S-firma_M_contig922:9754..16416+ (Sphaerotrichia firma Sfir_13m male) ATGATTACGCCGCCTTTTCGGTTCGGAGCGGTCGAGGCAGATGTGTTCCG GTCCGCGCAGCCGACGCTCAAGAACTATCGCTTCCTCTCCAGATGATTAC GCCGCCTTTTCGGTTCGGAGCGGTCGAGGCAGATGTGTTCCGGTCCGCGC AGCCGACGCTCAAGAACTATCGCTTCCTCTCCAGGTTAAAGCTTCGCACG GTGGTGTCCATTGCCCCGGAAGGGCCGATGGAGGACGAGGCGATGTTCTG CAGGGAGCACGCGGCACAACTCGTGCCGATTCGCGCGGAGCTGTACCGTG AGGAGGCGGTGACGGTTTCGTCCCAGCAGGTGGCGCAGGTTAAAGCTTCG CACGGTGGTGTCCATTGCCCCGGAAGGGCCGATGGAGGACGAGGCGATGT TCTGCAGGGAGCACGCGGCACAACTCGTGCCGATTCGCGCGGAGCTGTAC CGTGAGGAGGCGGTGACGGTTTCGTCCCAGCAGGTGGCGCAGGTGCTGGC TATCCTCGTGGACAAGAATCGCCTGCCCGCGCTCGTCCACTGTCCCGACG GCCGGGTGCTGTGCGGGGTCGTGCTCTGGTGCCTCAGGCGGCTGCAGTGC TGGGACGACCGGGCGTCGGCGGCGGAGTTTGCAAGGTTTTCCGGCGCTCT GCCTCCGCGAGAGGTGCTGGCTATCCTCGTGGACAAGAATCGCCTGCCCG CGCTCGTCCACTGTCCCGACGGCCGGGTGCTGTGCGGGGTCGTGCTCTGG TGCCTCAGGCGGCTGCAGTGCTGGGACGACCGGGCGTCGGCGGCGGAGTT TGCAAGGTTTTCCGGCGCTCTGCCTCCGCGAGAGGTTGAAAAGTTCGTGG CGAGTTTTGGGGAAGAGGTCACCGTCCCACAGAGCGTGCCACGATGGCTG TGGGGGGGAGACAGAGCACACTGGCATCCCACCATCCGAGTCCGGTTGAA AAGTTCGTGGCGAGTTTTGGGGAAGAGGTCACCGTCCCACAGAGCGTGCC ACGATGGCTGTGGGGGGGAGACAGAGCACACTGGCATCCCACCATCCGAG TCCGGCATCAGCCACCGCTTGAGGTGTTCGAGCCGGACCCAATCCCTCCC CACCAAACTCTCAGGTGCGTTCGTGTGCGGCGTGGTGTGAATAAATGCAC TCTGCGTCCGAAGCATCAGCCACCGCTTGAGGTGTTCGAGCCGGACCCAA TCCCTCCCCACCAAACTCTCAGGTGCGTTCGTGTGCGGCGTGGTGTGAAT AAATGCACTCTGCGTCCGAAGGGCGAAGTCCACACAAGAACAGACTACCT TAGGATGCGCAGGGGCCACATGCACGCCCACAACAAGGTCCCCGGGGTGA TCGGCGCGGACGGGCTGGGTGGAGGCGGAGGCGTCGGCGGCCGGGGACAG GGGGCTTCTTCGGCCGCGGGCAGCTCCGGGGCCGTCTCCTCCTCGGCGAG GGGCGAAGTCCACACAAGAACAGACTACCTTAGGATGCGCAGGGGCCACA TGCACGCCCACAACAAGGTCCCCGGGGTGATCGGCGCGGACGGGCTGGGT GGAGGCGGAGGCGTCGGCGGCCGGGGACAGGGGGCTTCTTCGGCCGCGGG CAGCTCCGGGGCCGTCTCCTCCTCGGCGAGAAGAAGACCTTCGGCTCATC ACGGCCAGACAGCCTCAAGCGCATTGTCTGGTCAGGACAGCTTCAGCCAA AGCATTCAGAAGAAGACCTTCGGCTCATCACGGCCAGACAGCCTCAAGCG CATTGTCTGGTCAGGACAGCTTCAGCCAAAGCATTCAGGACGTGAGTATC GGCATGCTCATGGAGGAGGAGGAGGGGCCCAAGCTGTCCAGAGCGGTGCA GGACGTGAGTATCGGCATGCTCATGGAGGAGGAGGAGGGGCCCAAGCTGT CCAGAGCGGTGCAGGCGTTGTCCCTCGAAGGTCTAGACGGGACTTCCTAC GACGACGAAGAAGACACGGTCTACGAGCACCACCATCATCACCACCACCA CCACCACCAGCCGCAGCACCGACACTCGTCTAGGGTCAGCGCCAGCCACA ACAGCCGAATCCGCAGGGGGGGGGGCGGGATTGGCAGCATGGGGGGAAGC CATTCGTGAGCGTTGTCCCTCGAAGGTCTAGACGGGACTTCCTACGACGA CGAAGAAGACACGGTCTACGAGCACCACCATCATCACCACCACCACCACC ACCAGCCGCAGCACCGACACTCGTCTAGGGTCAGCGCCAGCCACAACAGC CGAATCCGCAGGGGGGGGGGCGGGATTGGCAGCATGGGGGGAAGCCATTC GTGA back to top
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