mRNA_S-firma_M_contig92.20146.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: D7FZC1_ECTSI (Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC1_ECTSI) HSP 1 Score: 775 bits (2001), Expect = 2.350e-270 Identity = 441/738 (59.76%), Postives = 491/738 (66.53%), Query Frame = 2
Query: 110 MDLISQEHSVVSWTVMTLGVVLAAVVGKTGLGVLRAYYILRVRAGLPVVLWFPKFWRIDGRRQTGSSLSRVLKRMELLKGSRGMYGTVFGTQAVLHVADPEAAALVLSQHTKRPGYDHFGGFFGRGVFTADGDEWRRKRATVAHALFRGGS--ASXXXXXXXXXXXXXXXXXXXXXXXXXXKGLAVLANEEADSLLREVEALRKEDGELEVDVVRLLQRHTLNLIHRFLCGGEDVCASPEKQRLLPRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--MGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESHRAYPNAMLDETVTLLFAGQDTSAATLSWTMHLLSLPENRPYLAEVRREVLEAVG-PDGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPMVDACIRESQRLYPVAPFVVRHLTSDLRLNDGTLLPAGALACVWIYGLHRHPALWESPNAFLPERWLEGTKQPAGAFIPYASGPRGCVGRPFAGVALRILLARVCASLDFSPAATPAAVARDLQETGGGVDARTATTVEGGTEARDGFRAREEALSGSVRGDVTAGGGASREGWRGVVRGXXXXXXXXXXXXXKEMQAGFTVLPGGGVHLRLRKWK 2308
M L E + SWT++ L + AA +GK GLG+LRAYYILRVRAGLPVVLW+PKFWR+DGRRQ GSSLSRVLKRME+L+G GMYGTVFGTQAV+HVADPEAA LVLSQHTKRPGYDHFG FFGRGVFTADG+EWR+KRATVAHALFRGG+ AS K LAVLANEEADSLLREVEALR++ GELEV+VVRLLQ HTLNL+HRFLCGGE+VCASPE++ LL RYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPF+A+ET+NM+PIREFAELV+ETAV G P G T GN SRD A +G G R+G+ + XXXX P TALFNMAARESHRAYP +M+DET+TLLFAGQDTSAATLSWTMHLLSLPENRP+L EV REVL AVG PDGYVDC GG LPMVDACIRESQRLYPVAPFVVRHL++DLRL DGTLLPAGALACVWIYGLHRHPALW+SP+ F+P RWL G +QPAG+FIPYASGPRGCVGRPFAGVALRILLAR+C +LDFSPA+ A+ +E+ + RG V AG K+MQAGFTVLPGGGVHLRLRKW+
Sbjct: 1 MGLPDLEFPLASWTLVALVALSAATLGKVGLGMLRAYYILRVRAGLPVVLWYPKFWRMDGRRQKGSSLSRVLKRMEVLEGPHGMYGTVFGTQAVVHVADPEAATLVLSQHTKRPGYDHFGSFFGRGVFTADGEEWRKKRATVAHALFRGGAVTASGGGVADTRGVVSGEVGGGRGAAVGSGKALAVLANEEADSLLREVEALREKGGELEVEVVRLLQCHTLNLVHRFLCGGENVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFHARETKNMLPIREFAELVIETAVADGGKNQPEHGVRCTG--GN----SRDTAGGSSAGDTTVTNSSTSRKTNRVEGAMAREAVSTLIGEGG----RSGKRSAVGGGSREXXXXXXXXXRSGENAPKTALFNMAARESHRAYPGSMVDETITLLFAGQDTSAATLSWTMHLLSLPENRPHLLEVHREVLAAVGSPDGYVDCAGGGDGGFTAPATRNHNEEARQQRRPL------------LPMVDACIRESQRLYPVAPFVVRHLSTDLRLKDGTLLPAGALACVWIYGLHRHPALWKSPDKFMPGRWLNGARQPAGSFIPYASGPRGCVGRPFAGVALRILLARICLALDFSPASNDDAI--------------------------------DESEAAGSRGAVDAG-------------------------LTKDMQAGFTVLPGGGVHLRLRKWE 659
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: A0A835YLF9_9STRA (Cytochrome P450 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF9_9STRA) HSP 1 Score: 318 bits (815), Expect = 6.460e-94 Identity = 280/782 (35.81%), Postives = 332/782 (42.46%), Query Frame = 2
Query: 161 LGVVLAAVVGKTGLG-VLRAYYILRVRAGLPVVLWFPKFWRIDGRRQTGSSLSRVLKRMELLKGSRGMYGTVFGTQAVLHVADPEAAALVLSQHTKRPGYDHFGGFFGRGVFTADGDEWRRKRATVAHALFRGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXKGLAVLANEEADSLLREVEALRKEDGE----------------------------LEVDVVRLLQRHTLNLIHRFLCGGEDVCASPEKQRLLPRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESH--RAYPNAMLDETVTLLFAGQDTSAATLSWTMHLLSLPENRPYLAEVRREVLEAVGP-DGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLP-MVDACIRESQRLYPVAPFVVRHLTSDLRLNDGTLLPAGALACVWIYGLHRHPALWESPNAFLPERWL----------------------------------EGTKQPAGAFIPYASGPRGCVGRPFAGVALRILLARVCASLDFSPAATPAAVARDLQETGGGVDARTATTVEGGTEARDGFRAREEALSGSVRGDVTAGGGASREGWRGVVRGXXXXXXXXXXXXXKEMQAGFTVLPGGGVHLRLRKW 2305
L VVL+AV L VLRAYYILR RAG+P V W+PKFWRID RQ G SL RVL RM L G MYGTVFG QAVLHV DPEAAALVLSQ +K P YDHF GF GRGVFTADG EWR KR +V HALF+G L L NE AD+L ++ G EV++V +LQ+HTL +IH FL G + E+ L PRYL AV ++RMVILAR+RS+WM A W YR FS Y +E M PIR F+ + L A G A G + G R XXXXX S L +A RESH + YP +MLDE +TLLFAGQDTSAATLSW ++LLS P++R Y +R EV GP + XXXXXXXXXXXXXXX R P +V C + A F V T+ + GT A W LH HP LWE P F PERWL GAF+P+A+GPRGCVG+PFA ++LR+LLAR+ + D TT+ G + K+MQAGFTVLP GG+ LRL +W
Sbjct: 19 LCVVLSAVAAFRMLAMVLRAYYILRFRAGVPTVFWWPKFWRIDENRQKGGSLRRVLPRMRALGGKHDMYGTVFGGQAVLHVVDPEAAALVLSQSSKAPAYDHFRGFCGRGVFTADGPEWRAKRQSVNHALFKGARLDR---------------------------LDALVNEHADALCAQLSRAAGCSGTGAQXXXXXXXXXXXXXXXXXXXXXXXXXAEVEMVGVLQQHTLAIIHAFLTGSS-YTENKEQAALTPRYLAAVVEIRMVILARARSLWMLASSWAYRLFSDLYKREAAAMGPIRAFSRMALAAAEAGVASGGSAQGVKE---------GRRXXXXXXXX------------------------------------------------------------------SAPLAELALRESHSEQRYPGSMLDEAITLLFAGQDTSAATLSWALYLLSQPQHRRYREALREEVGGVCGPAESGAPVAAACLGRLRLVDAVVKEIVXXXXXXXXXXXXXXXKGGERRPSIVGYCNLKFHAQETGAAFHVPE-TATRQCAWGTC----ACRTQWSRSLHHHPDLWERPEEFRPERWLGADLSKPFEHCWKQHQXXXXXXXXXXXXXXXXXRAAAPHAPGAFMPFAAGPRGCVGQPFAHISLRVLLARLARAFD--------------------------TTLAGPAD--------------------------------------------------KDMQAGFTVLPLGGLRLRLSRW 616
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: A0A1Z5JE35_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JE35_FISSO) HSP 1 Score: 242 bits (617), Expect = 1.600e-67 Identity = 187/592 (31.59%), Postives = 258/592 (43.58%), Query Frame = 2
Query: 332 MELLKGSRGMYGTVFG-TQAVLHVADPEAAALVLSQH---------------TKRPGYDHFGGFFGRGVFTADGDEWRRKRATVAHALFRGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXKGLAVLANEEADSLLREVEALRKEDGELEVDVVRLLQRHTLNLIHRFLCGGEDVCASPEKQ-RLLPRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESHR-AYPNAMLDETVTLLFAGQDTSAATLSWTMHLLSL-PENRPYLAEVRREVLEAVGPDGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPMVDACIRESQRLYPVAPFVVRHLTSDLRLND-----GTLLPAGALACVWIYGLHRHPALWESPNAFLPERWLE-GTKQPAGAFIPYASGPRGCVGRPFAGVALRILLARVCASLDFSPAATPAAVARDLQ 2032
M+ L+G MYGTV+G + AV+HVA P AA +LS K P Y+HF F G+GVFTADG +W+ KRA V HALFR S + L N A L++ ++ + E ++V +LQ T++LI+R++ E P+KQ L+ YL++V +R++ILA+SRS+W W+YR S + +E M+PIR+FA A Q GS P AL M + +R A+ ++ E +TLLFAGQDTSAATLSWT+HLLSL PE + +A + VL+ D +P +DA ++ES RLYPVAPF+VR +T L + LPAGALACVWIYGLHR+ A WE+PN F PERWL+ G + G+++P+A GPR CVG+P A + LRI LA + + DF + +D+Q
Sbjct: 1 MKALQGPYDMYGTVYGLSTAVVHVAHPTAALAILSPAKQPKTSSPWLESTGIVKAPAYNHFQNFCGQGVFTADGQDWKNKRAAVIHALFRTTSGNWETH------------------------LEQQVNRAAQKLVQTLQQTQPEPR----NIVPILQTSTISLIYRYITHTE----LPQKQSNLVSSYLESVIRIRLIILAQSRSLWFLLPRWIYRTCSALFRQEEETMIPIRDFATQACRVA--------------------------------------------------------------------------QPGS----------------------PLDALRQMPIYQDNRSAFSENLIYEAITLLFAGQDTSAATLSWTLHLLSLHPEIQQTVAAEVQAVLKESKDVSRADVSN-------------------------------------MPWLDAVLKESMRLYPVAPFIVRKITRPTELPELDGRPSVTLPAGALACVWIYGLHRNDAFWENPNEFKPERWLKKGHEVVPGSYMPFAHGPRNCVGQPLAHIMLRIFLAHLLNAFDFQIPSGEPGETKDMQ 427
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: K0RG15_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RG15_THAOC) HSP 1 Score: 228 bits (580), Expect = 5.640e-60 Identity = 205/700 (29.29%), Postives = 272/700 (38.86%), Query Frame = 2
Query: 284 DGRRQTGSS-LSRVLKRMELLKGSRGMYGTVFGTQA-VLHVADP---------------------------------------------------------EAAALVLSQHTKRPGYDHFGGFFGRGVFTADGDEWRRKRATVAHALFRGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXKGLAVLANEEADSLLREVEALRKEDGELE-----------VDVVRLLQRHTLNLIHRFLCGGE-----DVCAS--------------PEKQR----------------------------------LLPRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESHRAYPNAMLDETVTLLFAGQDTSAATLSWTMHLLSL-PENRPYLAEVRREVLEAVGPDGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPMVDACIRESQRLYPVAPFVVRHLTSDLRL-NDGT-----LLPAGALACVWIYGLHRHPALWESPNAFLPERWLEGT-------KQPAGAFIPYASGPRGCVGRPFAGVALRILLARV 1972
DGR+ GSS ++ +L RME L G GMY TV+G + V+HVA P +AA L+ TK P YDHF F G GVFTADG +W+ KRA+V H L R + + L AN AD REV+A LE +DVV +LQR T+ LI+R + E ++C S P R LLP YLD+VT +RM+ILA+SRS W W+YR SP Y +E + M PIR FA L+T + A G+P RA +GS A ++ +++ +LDE +TLLFAGQDTSAATLSWT+HLLSL PE + LA+ + L+ ++P +DA I+ES RLYPVAPF+VR LTSD+ + ND + LPA AC+WIY + R+P LW P FLPERW++ + + G++IP+A GPR C+G+P A V LR+LLAR+
Sbjct: 114 DGRKAMGSSSITNILPRMERLDGPYGMYATVYGVRTKVVHVAHPVPTRAILTGAGTIDVADVGECSYSRQRHSGRRTSLRGIISGSAKDAQVDGGTQPRRRSSAARFLTGSTKSPAYDHFKNFSGDGVFTADGADWKAKRASVLHCLIRNSNIE--------------------------ETLEAQANRSADCFEREVKAATLLGQNLEKAKSGRPSLRVIDVVPMLQRSTVGLIYRLITHHEIDFSPNLCESMTRLDTYASSRRGDPPSPRSSATSLERLVNSETSESGRCCQVSPTENDLDVKSLLPTYLDSVTKIRMIILAQSRSFWYLVPRWMYRLLSPMYREEEKTMKPIRNFA---LQTC-KNAKEGSPLD--------------------------------------------------------LMRKRASHSGSN------------------------AKPDLVSKD--------LLDEAITLLFAGQDTSAATLSWTLHLLSLHPEKQQKLADEIKAALDL-----------------------------------SDTRRVSKNIISQMPYLDAVIKESMRLYPVAPFIVRKLTSDITIPNDSSGKERITLPAATFACIWIYAIQRNPRLWHQPEDFLPERWIDSSLRRMDLGQSEYGSYIPFAIGPRNCLGQPLAHVVLRVLLARI 660
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: A0A7S1ZMQ3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMQ3_TRICV) HSP 1 Score: 215 bits (547), Expect = 5.970e-56 Identity = 193/692 (27.89%), Postives = 264/692 (38.15%), Query Frame = 2
Query: 305 SSLSRVLKRMELLKGSRGMYGTVFGTQA-VLHVADPEAAALVLSQH------------------------------------------------------------TKRPGYDHFGGFFGRGVFTADGDEWRRKRATVAHALFRGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXKGLAVLANEEADSLLREVE-ALRKEDGEL---EVDVVRLLQRHTLNLIHRFL---------CGGE--------------------------------------DVCASPEKQRLLPRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESHRAYPNAMLDETVTLLFAGQDTSAATLSWTMHLLSL-PENRPYLAEVRREVLEAVGPDGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPMVDACIRESQRLYPVAPFVVRHLTSDL-------------RLNDGTLLPAGALACVWIYGLHRHPALWESPNAFLPERWLEGTKQP----------AGAFIPYASGPRGCVGRPFAGVALRILLARV 1972
S+++ +L RME L G GMYGTV+G V+H+A P A L+LS +K P Y+HF F G GVFTADGD+W+ KR ++ H L +G ++ K L AN ADS + ++E A + G+ +V+VV +LQR T+ LI+RF+ C E ++ AS LL YL++VT +RM+ILA+SRS+W W YRAFS Y +E M PIR+FA + + A G+P A R AG++ ++DE +TLLFAGQDTSAATLSWT+HLL+L P+ + LAE VL + ++P++DA I+ES RLYPVAPFVVR L +D+ R T++P G +ACVWIY LHR+P W PN F+PERW++ + AF+P+A GPR C+G+P A V LRILLAR+
Sbjct: 4 SAITNILPRMERLCGPYGMYGTVYGLSTRVVHIAHPVPARLILSGDGGAGGGPRGPSGKLAFADTGKSWRESLRNVLNPGVVSSSPSRGLSRSRSSLGMLASSSGASKAPAYNHFKDFSGDGVFTADGDDWKAKRNSLMHCLLKGCTSDKSKGI---------------------KRLEREANRAADSFIEQIEHAGTNKTGKGRSGKVNVVPMLQRATIGLIYRFITHHNVDIFKCDDEKGTSERDYDRKSQEGDLPYLTSWRSSESSTCSECPNDHEIPASRPPSALLSSYLESVTQIRMIILAQSRSLWFLTPRWFYRAFSAMYCQEDSTMGPIRDFARMTCQNARE----GSPLA--------------------------------------------------------MLRARDSHAGAK-------------GNPQXXXXXXXXXXXXXVGNDGEGVTKDLMDEAITLLFAGQDTSAATLSWTLHLLALYPDIQRKLAEEVHNVLNEEPEE------------------------ERCTDESAHKSFFTKRLVTKMPLMDAVIKESMRLYPVAPFVVRRLPNDVTIPPENKAEGKGTREGKPTVIPEGTVACVWIYSLHRNPKFWHRPNDFVPERWMDPAVRALDEQKSRGLNTSAFMPFAYGPRNCLGQPLAHVILRILLARI 577
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: B8BWN1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN1_THAPS) HSP 1 Score: 191 bits (485), Expect = 1.300e-49 Identity = 134/408 (32.84%), Postives = 177/408 (43.38%), Query Frame = 2
Query: 803 DVCASPEKQRLLPRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESHRAYPNAMLDETVTLLFAGQDTSAATLSWTMHLLSL-PENRPYLAEVRREVLEAVGPDGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPMVDACIRESQRLYPVAPFVVRHLTSDLRL--------NDGTL--LPAGALACVWIYGLHRHPALWESPNAFLPERWLEGT-------KQPAGAFIPYASGPRGCVGRPFAGVALRILLARV 1972
DV + + LLP YLDAVT +RM++LA+SRS+W W YR FSP Y E R MVPIR+FA L E AV G+P R+ A E E+ A +LDE +TLLFAGQDTSAATLSWT+HLLSL P+ + + E R VL ++ V +LP +DA I+ES RLYPVAPF+VR LT+D+ + +D T +P AC+WIY L R+P LW P+ F+PERW++ +Q G+++P+A GPR C+G+P A V LR+LLAR+
Sbjct: 82 DVKKDSQMKLLLPIYLDAVTKIRMIVLAQSRSIWYLLPRWAYRTFSPMYRDEERTMVPIRQFARLACENAVE----GSPLE--------------------------------------------------------LLSQRSSHASKE-------------------------------GEATSAVSKDLLDEAITLLFAGQDTSAATLSWTLHLLSLHPQEQQKVVEEVRSVLSSLDEGEMVS----------------------------------KNTISQLPYLDAVIKESMRLYPVAPFIVRKLTTDVTIPIESQSVEDDATTTTIPESTFACIWIYALQRNPKLWTKPDEFIPERWIDPDLRSNDLGQQEVGSYMPFALGPRNCLGQPIAQVILRVLLARI 364
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: A0A448ZT73_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZT73_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.080e-48 Identity = 178/615 (28.94%), Postives = 253/615 (41.14%), Query Frame = 2
Query: 284 DGRRQTGSSLSRVLKRMELLKGSRGMYGTVFG-TQAVLHVADPEAAALVL---------------------SQHT---KRPGYDHFGGFFGRGVFTADGDEWRRKRATVAHALFRGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXKGLAVLANEEADSLLREVEAL--------RKEDGELEVDVVRLLQRHTLNLIHRFLCGGEDVCASPEKQRLLPRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESHRAYPNAMLDETVTLLFAGQDTSAATLSWTMHLLSL-PENRPYLAEVRREVLEAVGPDGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPMVDACIRESQRLYPVAPFVVRHLTSDLRL----NDGTL-LPAGALACVWIYGLHRHPALWESPNAFLPERWLEGT-KQPA---GAFIPYASGPRGCVGRPFAGVALRILLARVCASLDFSPA 1999
+ ++ + SS++R+L +M G GM+GTV+G T V+HVA P A +L SQ T K P YDHF F G GVFT DG++W+ KR+ + H L +G ++S + L + AN A + R+V+AL + E G + +++ LLQR T+ I+R+L + P + D M + + SV A S ET + V + L ++ A K N SR + P GSE P ++ + + N ++ E TLLFAGQDT AATLSW +HLLSL P + LA+ +EVL+A X +LP +DA ++ES RLYPVAPFVVRHL D+ + +GT+ LPAGA A +WIYGLHR+P W P+ F+PERW + + K P GA++P+ASGPR C+GRP A + LR +LA+V F+ A
Sbjct: 10 NDKKLSSSSVTRILPKMRKHGGPYGMFGTVYGITTPVIHVAHPIPAKAILNGRVNMNSKGVARRPSVSLPVSQSTPTSKAPSYDHFKDFMGMGVFTTDGEDWKAKRSAIIHHLIKGTASSTSELS---------------------QRLEIEANRAATTFCRQVQALQHDQSSSIKSEXGVVTTNIIPLLQRSTIGFIYRYLTSADPKWLLPVNMMCYSEH----DDGXMTTASENSSV----------ASS---LDETASSVTGTDDDTCSLSSSSSMLNNYLSATMKIRMIILAN----SRSLWYLLPRCCYRLFSSLYRDEKMTLRVIHKFAEKACEDAQXHSPLGRLRGSEGP------------------------YSSENSDCKSSSENNLMYEATTLLFAGQDTGAATLSWALHLLSLYPHTQERLAKELQEVLDA-----------------------------DEIFXKHEDRIITKKMLLKLPYLDAVVKESMRLYPVAPFVVRHLQEDICIPKESENGTVTLPAGANALIWIYGLHRNPEFWACPDDFVPERWTDNSIKDPGQXNGAYMPFASGPRNCLGRPLAHINLRTILAKVIYEFKFTDA 529
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: A0A7S3V4R1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4R1_9STRA) HSP 1 Score: 187 bits (475), Expect = 4.710e-46 Identity = 192/751 (25.57%), Postives = 259/751 (34.49%), Query Frame = 2
Query: 245 LPVVLWFPKFWR----IDG----------------------RRQTGSSLSRVLKRMELLKGSRGMYGTVFGTQA-VLHVADPEAAALVL--------------------SQHTKR------------PGYDHFGGFFGRGVFTADGDEWRRKRATVAHALFRGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXKGLAVLANEEADSLLREVEALRK-EDGELEVDVVRLLQRHTLNLIHRFLC-------------------------------------------------------------GGEDVCASPEKQRLLP--------------------------RYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESHR-----------AYPNAMLDETVTLLFAGQDTSAATLSWTMHLLSLPENRPYLAEVRREVLEAVGPDGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPMVDACIRESQRLYPVAPFVVRHLTSDLRL---------NDGTLLPAGALACVWIYGLHRHPALWESPNAFLPERWLEGTKQPA--------GAFIPYASGPRGCVGRPFAGVALRILLARV 1972
LP + W PKF ID ++ S+++ +L RME L G G+Y TV+G V+H+A P A +L S+ KR P Y+HF F G GVFTADG W+ KR +V H L +G + L AN AD+ L +L K DG +V++V LLQR T+ LI+RF+ V R +P YL+A+T++RM+ILA+SRS+W YRAFS Y +E + M IR FA + + A G+P L + +R+SH A +LDE +TLLFAGQDTSAATLSWT+HLLSL N V +EV E++ +G ++ +DA IRES RL+PVAPFVVR + ++ + + P AC+WIY LHR+ LW PN F+PERWL+ Q G FIP+A+GPR CVG+P A LRI+LAR+
Sbjct: 54 LPTITWMPKFVNYMPEIDDHSSLNHDTILDDVKLKSGETKKKKMPSSNITNILPRMERLNGPYGIYATVYGVSTKVIHIAHPIPAKAILMGKSSDVPILSRQSNKTVKKSERKKRSSVADNLGAIKNPAYNHFKNFSGDGVFTADGITWKAKRTSVLHCLLKGCTKDESEESLR---------------------LEREANIAADNFLSN--SLSKGNDGNSKVNIVPLLQRATIGLIYRFISHHDVDTHYQSQEKVQEVSSCRNTADGIVNFGESNDKIQNKIGYAFKGLNDSRNCDASTSNSSNSSVTDDSSTDRSIPIQNLSEEREIMNKGKGDDCNPFEFLSTYLEAITNIRMIILAQSRSIWFLLPQCFYRAFSSMYKEEEKQMKTIRRFARIACQNATI----GSP-----------------------------------------------------------------------------------------------LHMLRSRQSHNPEMKDDIKNGDAINKELLDEAITLLFAGQDTSAATLSWTLHLLSL--NPSIQQRVTKEVKESLSNEGL---------------------------NPASTNRITKKMVSKMSYLDAVIRESMRLFPVAPFVVRKIPEEVTIPGDPEISGKGETITFPKDTFACIWIYSLHRNQKLWHRPNDFVPERWLDPNLQKMDAAQTSHKGTFIPFAAGPRNCVGQPLAHNILRIMLARI 653
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: A0A7S2UL92_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL92_9STRA) HSP 1 Score: 183 bits (465), Expect = 8.150e-45 Identity = 178/655 (27.18%), Postives = 261/655 (39.85%), Query Frame = 2
Query: 245 LPVVLWFPKFWRI----DGRRQTG------------SSLSRVLKRMELLKGSRGMYGTVFGTQA-VLHVADPEAAALVL----------------------SQHTKRPGYDHFGGFFGRGVFTADGDEWRRKRATVAHALFRGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXKGLAVLANEEADSLLREVEALRKEDGELEVD-------------VVRLLQRHTLNLIHRFLCGGEDVCASPEKQRLLPRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESH--------RAYPN-----AMLDETVTLLFAGQDTSAATLSWTMHLLSL-PENRPYLAEVRREVLEAVGPDGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPMVDACIRESQRLYPVAPFVVRHLTSDLRL-------NDGTLLPAGALACVWIYGLHRHPALWESPNAFLPERWLE------GTKQPAGAFIPYASGPRGCVGRPFAGVALRILLARV 1972
LP V+W P+F D ++ G S+++ +L +ME L G GM+GTV+G V+H+A P VL + TK P Y+HF F G GVFT+DGDEW+ KRA+V H L +G + S + L N AD +R+VE ++ + + + VV ++QR T+ LI+RF+ E S + + T+ + + + + ++ + V+ G + + TT + + MG F RA +P + L + + SH + +P AMLDE +TLLFAGQDTSAATLSWT+HLLSL P+ + L E R V++ D D ++P +DA ++ES RLYPVAPF+VR L L + T+LPAG+LAC+WIYGLHR+ LW+ P+ F+P+RW++ Q GAF+P+A+GPR CVG+P A V LRI+LAR+
Sbjct: 76 LPTVIWIPRFLNYTPLEDENQKEGTKSLPKKLKLGSSAITGILPKMERLGGPYGMFGTVYGLNTMVVHMAHPTPVRQVLMGIGGKPSSPSSGRRSSSVTTSAGATKSPAYNHFKNFSGDGVFTSDGDEWKAKRASVIHCLLKGINGSNSDAS---------------------RRLEREVNRSADRFVRDVEKIQSQANIMPTEQDLSDNGNCAGFNVVPVMQRTTVELIYRFITHDEK---SLDDDSFEEDNMSCQTNGCLDGTDQDDETXXXXXXXXXXXXXXXXXXTSSE----KNLSQHLCSAKVQ---GDLNESSQHKTTLIQSYLQSVTKIRMIILAQSRSFWFLLPRWVYRTFSSMFQEEEETMGPIRKFAMRA----------------------YLRAKPGSPLAMLQKQPSHSDSKMVKEKGFPESIVSKAMLDEAITLLFAGQDTSAATLSWTLHLLSLHPDIQQRLIEEIRMVMKTTECDWKKD------------------------------GSMSKKSISKMPFLDAVLKESMRLYPVAPFIVRKLPEPLEIPAEKDPIKSPTILPAGSLACIWIYGLHRNKQLWDRPDEFIPDRWIDPQLRERDKGQNNGAFMPFAAGPRNCVGQPLAHVILRIMLARI 647
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Match: A0A7S4ERB2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ERB2_9STRA) HSP 1 Score: 182 bits (463), Expect = 9.350e-45 Identity = 194/748 (25.94%), Postives = 284/748 (37.97%), Query Frame = 2
Query: 236 RAGLPVVLWFPKFWR------IDGRRQTGSSLSRVLKRMELLKGSRGMYGTVFG-TQAVLHVADPEAAALVLSQH----------------------TKRPGYDHFGGFFGRGVFTADGDEWRRKRATVAHALFRGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXKGLAVLANEEADSLLREVEALRKED--------GELEVDVVRLLQRHTLNLIHRFLCGGEDVCASPEKQRLLPRYLDAVTDMRM--VILARSRSVWMFAWGWV----YRAFSPFYAKETRNMVPIREFAELVLETAVRRAGGGNPAAGKSDTTDDGNGSDGSRDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGRGAFFPPRAGQAGSEPPACTPAAGVGXXXXXXAAPEPSTALFNMAARESHRAYPNAMLDETVTLLFAGQDTSAATLSWTMHLLSLPEN-RPYLAEVRREVLEA----VGPDGYVDCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPMVDACIRESQRLYPVAPFVVRHLTSDLRL-----NDGTLLPAGALACVWIYGLHRHPALWESPNAFLPERWLEGT-KQPA---GAFIPYASGPRGCVGRPFAGVALRILLARVCASLDFSPAATPAAVARDLQETGGGVDARTATTVEGGTEARDGFRAREEALSGSVRGDVTAGGGASREGWRGVVRGXXXXXXXXXXXXXKEMQAGFTVLPGGGVHLRLRKWK 2308
R+GLP V W P+F I+ ++ SS++R+L +M G GM+GTV+G T V+HVA P A +LS +K P YDHF F G+GVFT DGD+W+ KR + H L +G ++S + L AN A + +V+AL+ + G + DV LLQR T+ I+R+L + P + D + + LA S + + + + SP + + + + ++L SR + A A + +P A + + S+A S +++ ++ E TLLFAGQDT AATLSWT+HLLSL + + LA+ REVL+ VG + + +LP +DA I+ES RLYPVAPFVVR L ++ + + LPAG+ A +WIY LHR+P W P+ F+PERW++ K P G+++P+A GPR C+GRP A + LR +LA+V F+ D R TV+ + R EM+AGFTVLP GGVHL + K
Sbjct: 77 RSGLPTVYWRPRFMNYEYQPSINDQKLAPSSVTRILPKMRKHGGPFGMFGTVYGVTTPVIHVAHPIPAKAILSGRISANSKGVSRRPSVSIAHSTATSKAPSYDHFKDFMGKGVFTTDGDDWKAKRTAIMHHLIKGTASSTSELS---------------------QRLETEANRAATTFCGQVQALQLDQTGTTYNKRGVVTADVTPLLQRSTIGFIYRYLTNADPEWLLPVNMVCETKCGDDIMGISSENCSLASSTDETVASVSGIDDDIFSLSSPSSSMLNKYLSATVKIRMIILAN--------------------------SRSLWYLLPRWCYRFFSSLYRDEKRTLDVIHEF--------------AKMACEDAQPQSPLARLRESGGPYNSDNSSSA--------SRKSFNKNLMYEATTLLFAGQDTGAATLSWTLHLLSLYSHAQERLAKELREVLDVDENFVGSEERI---------------------------------ITKKMILKLPYLDAVIKESMRLYPVAPFVVRRLQEEIYIPMEKKGETMSLPAGSDALIWIYSLHRNPEFWGRPDDFIPERWIDSNLKDPGQSNGSYMPFAVGPRNCLGRPLAHINLRTILAKVIYEYKFT-------------------DIRL-RTVDNANDLRI------------------------------------------------EMEAGFTVLPTGGVHLEIENRK 654 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig92.20146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig92.20146.1 >prot_S-firma_M_contig92.20146.1 ID=prot_S-firma_M_contig92.20146.1|Name=mRNA_S-firma_M_contig92.20146.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=734bp MDLISQEHSVVSWTVMTLGVVLAAVVGKTGLGVLRAYYILRVRAGLPVVLback to top mRNA from alignment at S-firma_M_contig92:32995..40415- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig92.20146.1 ID=mRNA_S-firma_M_contig92.20146.1|Name=mRNA_S-firma_M_contig92.20146.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=7421bp|location=Sequence derived from alignment at S-firma_M_contig92:32995..40415- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig92:32995..40415- >mRNA_S-firma_M_contig92.20146.1 ID=mRNA_S-firma_M_contig92.20146.1|Name=mRNA_S-firma_M_contig92.20146.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=4404bp|location=Sequence derived from alignment at S-firma_M_contig92:32995..40415- (Sphaerotrichia firma Sfir_13m male)back to top |