mRNA_S-firma_M_contig918.20122.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: D7G7A7_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A7_ECTSI) HSP 1 Score: 359 bits (922), Expect = 5.650e-112 Identity = 182/283 (64.31%), Postives = 216/283 (76.33%), Query Frame = 1
Query: 1990 MAHHPALRWVSNEHMIGVPGEEAHVIDEMGAAGFNEMLAQGTAGKYGRVAPVASETDRVIDY---TPHFSIKAEVPYRILDIYEDAARNGSTKYIVTLRDPVARAISSWQSKFDLKVLTEDYDAEEEAKHISETRFLAEAVRQGEEGVIAHERCLERELQLAGGSWNPELKREVDLERCRLRDFLGATHLLYWAHVAKGIYTMQLERWFSLVGRENIKVLFLEETALDPVGALSEILEFIGLDLVDEEGGKGLPSRQHWEDVVSVIHNETDEARKRVLGWQVT 2829
MAHHPAL+WVSN HMIG EEAHV+DE+G F +ML QG GKYG+ AP A E+D+VID TPH SIKAEVPYRILDIY DAAR+GS KY++ LRDPVARAISSW SKFDL L E + E +TR LAEA++QGE G+ A C +E +LA SW+PE ++ ++LERC +R+FLG + LYWAHVAKG+Y QLERWF+LVGRENIKV FLEETA DPVGAL+ I EFIGLDL+DEEG KGLP+R+ WE VV+ +HNETDE RK +L QVT
Sbjct: 1 MAHHPALQWVSNLHMIGRVAEEAHVLDELGKEDFQQMLGQGPTGKYGQTAPFAEESDKVIDCAADTPHCSIKAEVPYRILDIYGDAARDGSNKYLIQLRDPVARAISSWTSKFDLLSLEEGFV---EGDSAGDTRSLAEAIQQGEHGMAALNDCEGKERRLAAPSWDPERQKVMELERCPMRNFLGHSQGLYWAHVAKGMYARQLERWFALVGRENIKVTFLEETAADPVGALASIFEFIGLDLLDEEGEKGLPNREAWESVVATVHNETDEKRKTILDQQVT 280
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: A0A6H5JZE4_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE4_9PHAE) HSP 1 Score: 268 bits (685), Expect = 3.370e-76 Identity = 150/317 (47.32%), Postives = 204/317 (64.35%), Query Frame = 1
Query: 1894 RCW-LDESGLQRCQANVFLFGVSKCGTSSLAAWMAHHPALRWVSNE-HMIGVPGEEAHVIDEMGAAGFNEMLAQGTAGKYGRVAPVASETDRVIDYTPHFSIKAEVPYRILDIYEDAARNGSTKYIVTLRDPVARAISSWQSKFDLKVLTEDYDAEEEAKHISETRFLAEAVRQGEEGVIAHERCL-ERELQLAGGSWNP-ELKREVDLERCRLRDFLGATHLLYWAHVAKGIYTMQLERWFSLVGRENIKVLFLEETALDPVGALSEILEFIGLDLVDE-EGGKGLPSRQHWEDVVSVIHNETDEARKRVLGWQVT 2829
RC+ L+ RC ANV+ FGVSKCGT+SLA WMA HPAL+WVSN H G EAHV+ EM +E Y AP+ ++TD+VIDYTPH+SI AEVPYRI D+Y + +G+ KYI LR+PVAR ISSW+ K+DL+ + + E SE R L EA +G E ++ +CL ++E L P LK +DL+ C FL H ++++HV K IY++QLERW L GREN+KV+FLEE A+DP+G ++ + +F+G+DL+DE EG KGL SR WE++V HN T++ +K++L QVT
Sbjct: 110 RCFVLEGEDSSRCHANVYFFGVSKCGTTSLAHWMARHPALQWVSNTCHTQHKQGGEAHVM-EMSTIKNSEST-------YALTAPMTAQTDKVIDYTPHYSILAEVPYRIKDMYGKTSYDGTVKYIAVLREPVARTISSWEFKYDLRGIEKG----EAVNPSSERRSLEEAFSEGREHALSLVKCLSDKENDLRNEIRYPGALKLNIDLQMCNPHAFLE--HNMFFSHVGKSIYSLQLERWLDLFGRENVKVVFLEEMAVDPMGTIASVFDFLGVDLLDEKEGVKGLRSRTEWEEIVRTKHNLTNQRKKKILDEQVT 412
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: D7G7B1_ECTSI (Sulfotransferase, C-terminal Sulfotransferase, N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B1_ECTSI) HSP 1 Score: 243 bits (621), Expect = 1.290e-68 Identity = 139/283 (49.12%), Postives = 180/283 (63.60%), Query Frame = 1
Query: 1894 RCW-LDESGLQRCQANVFLFGVSKCGTSSLAAWMAHHPALRWVSNE-HMIGVPGEEAHVIDEMGAAGFNEMLAQGTAGKYGRVAPVASETDRVIDYTPHFSIKAEVPYRILDIYEDAARNGSTKYIVTLRDPVARAISSWQSKFDLKVLTEDYDAEEEAKHISETRFLAEAVRQGEEGVIAHERCL-ERELQLAGGSWNP-ELKREVDLERCRLRDFLGATHLLYWAHVAKGIYTMQLERWFSLVGRENIKVLFLEETALDPVGALSEILEFIGLDLVDEEGG 2730
RC+ L+ RC ANV+ FGVSKCGT+SLA WMA HPAL WVSN H G EAHV+ EM NE Y AP+A++TD VIDYTPH+SI AEVPYRI D+Y + +G+ KYI LR+PVAR ISSWQ K+DL E + E A SE R L EA +G E ++ +CL ++E +P LK +DL+ C FL H +Y++HV K IY++QLERW L GREN+KVLFLEE A+DP+G ++ + +F+G+DL+DE+ G
Sbjct: 70 RCFVLEGEDSSRCHANVYFFGVSKCGTTSLAHWMARHPALSWVSNVWHTRHKQGGEAHVM-EMSTIKDNEST-------YALTAPMAAQTDTVIDYTPHYSILAEVPYRIRDMYGKTSYDGTVKYIAVLREPVARTISSWQFKYDL----EGIEKGEAANPSSERRSLEEAFSEGREHALSLVKCLSDKENDQRNQIRHPGALKLYIDLQMCNPHAFLE--HNMYFSHVGKSIYSLQLERWLDLFGRENVKVLFLEEMAVDPMGTITSVFDFLGVDLLDEKEG 338
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: D8LLL8_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLL8_ECTSI) HSP 1 Score: 218 bits (556), Expect = 4.060e-58 Identity = 130/319 (40.75%), Postives = 175/319 (54.86%), Query Frame = 1
Query: 1891 DRCWLDESGLQRCQANVFLFGVSKCGTSSLAAWMAHHPALRWVSNE---HMIGVPG-EEAHVIDE--MGAAGFNEMLAQGTAGKYGRVAPVASETDRVIDYTPHFSIKAEVPYRILDIYEDAARNGSTKYIVTLRDPVARAISSWQSKFDLKVLTEDYDAEEEAKHISETRFLAEAVRQGEEGVIAHERCLERELQLAGGSWNPELKREVDLERCRLRDFLGATHLLYWAHVAKGIYTMQLERWFSLVGRENIKVLFLEETALDPVGALSEILEFIGLDLVDEEGGKGLPSRQHWEDVVSVIHNETDEARKRVLGWQVT 2829
+RC++ G RC VF FG SKCGT+SLA W+ HHPA WV+N H I G +EAHV D+ G F E + K P + D VIDYTPH+ AE P+RI DIY R K+IVTLR+P RAISSW+ K +Y+ ++ + E+R LA+ + G + CL A R+ DL+ C R FL LY +HV K +Y +QLERWF L GREN KV+F ++ A+DPVG L ++L F+GL+L E+ KGLP + W+ + + +N+T +K LG QVT
Sbjct: 157 NRCFVGAEGDHRCYPTVFFFGTSKCGTTSLARWLDHHPATHWVANPRRPHQIEETGVKEAHVFDDPPKGDPAFEEGMHH---EKLFITTPKSGAEDVVIDYTPHYIAVAETPHRIADIY--GGRESGLKFIVTLREPAGRAISSWEFK-------NEYNPKKGRRE--ESRSLAKTIEDGGRRAMKLHACLALAKSKAVSP------RDRDLKLCNPRKFLEVP--LYVSHVGKSMYALQLERWFDLFGRENFKVVFTDDMAVDPVGVLEDVLHFLGLELTSEDESKGLPDMKGWKKITGMAYNKTKSKKKDELGDQVT 453
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: D7FHD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD4_ECTSI) HSP 1 Score: 186 bits (473), Expect = 6.560e-46 Identity = 127/369 (34.42%), Postives = 174/369 (47.15%), Query Frame = 1
Query: 1894 RCWLDESGLQRCQANVFLFGVSKCGTSSLAAWMAHHPALRWVSNEHMIGVPGEEAHVIDEMGAAGFNEMLAQGTA--GKYGRVAPVASETDRVIDYTPHFSIKAEVPYRILDIYEDAARN---GSTKYIVTLRDPVARAISSWQ-------------------------SKFDLKVLTEDYDAEEEAKH-------ISETRFLAEAVRQGEEGVIAHERCLERELQLAGGSWNP--------------------ELKREVDLERCRLRDFLGATHLLYWAHVAKGIYTMQLERWFSLVGRENIKVLFLEETALDPVGALSEILEFIGLDLVDEEGGKGLPSRQHWEDVVSVIHNETDEARKRVLGWQVT 2829
RCW DE+G RC VF FGVSKCGT+SL+ W++ HP + VP EAH E G + GK ++P+AS D VID+TP+++I E P RI D Y A + +++V LR+PVAR ISSW+ S++ ++ D A E+ + + E R L+ A R+G V C+ P EL C R +LG +LY AHV K +Y MQL RWF+ GREN KV+F ++ +P+ L E+L+FIGLD+VD +G KGL S + W D+V N D A+K+VL QVT
Sbjct: 246 RCWTDEAGNGRCLPTVFFFGVSKCGTTSLSNWLSSHP--------RAVFVPPPEAHDYREAHVFDNTPKYWHGVSDRGKRESLSPMASWRDTVIDFTPNYAIVGEAPLRIYDYYHQAGGGRLRSNLRFLVVLREPVARTISSWEYKSEPLGPHGNGTGNSSYSSGGGAISEWPQRIGGVDIGASEDMRDRRRLDFVMEEQRPLSVAFREGAATVERLAACVRNATDSGLFGREPTVTYCRATKGRKQCNGRPPCELCNTHTEPWCNPRVYLG--EVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTDDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADGAKKKVLDSQVT 604
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: A0A6H5L1A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A9_9PHAE) HSP 1 Score: 113 bits (282), Expect = 9.060e-23 Identity = 63/146 (43.15%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 1894 RCWLDESGLQRCQANVFLFGVSKCGTSSLAAWMAHHPALRWVSNEHMIGVPGEEAHVIDEMGAAGFNEMLAQGTA--GKYGRVAPVASETDRVIDYTPHFSIKAEVPYRILDIYEDAARN---GSTKYIVTLRDPVARAISSWQSK 2316
RCW DE+G RC VF FGVSKCGT+SL+ W++ HP + VP EAH E G + GK ++PVAS D VID+TP+++I E P RI D Y A + +++V LR+PVAR ISSWQ K
Sbjct: 244 RCWTDEAGNGRCLPTVFFFGVSKCGTTSLSNWLSSHP--------RAVFVPPPEAHDYREAHVFDNTPRYWHGVSDRGKRESLSPVASSRDTVIDFTPNYAIVGEAPLRIYDYYHQAGGGRLRSNLRFLVVLREPVARTISSWQYK 381
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: A0A6H5L245_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L245_9PHAE) HSP 1 Score: 103 bits (258), Expect = 4.520e-21 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 2515 CRLRDFLGATHLLYWAHVAKGIYTMQLERWFSLVGRENIKVLFLEETALDPVGALSEILEFIGLDLVDEEGGKGLPSRQHWEDVVSVIHNETDEARKRVLGWQVT 2829
C R +LG +LY AHV K +Y MQL RWF+ G EN KV+F E+ +P+ L E+L+FIGLD+VD +G KGL + + W ++V N D A+K+VL QVT
Sbjct: 105 CNPRVYLG--EILYNAHVGKSVYAMQLRRWFNAFGSENFKVVFTEDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRNLEMWSEIVGARFNTADGAKKKVLDSQVT 207
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: A0A835YNP6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP6_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.850e-18 Identity = 70/213 (32.86%), Postives = 103/213 (48.36%), Query Frame = 1
Query: 1912 SGLQRCQANVFLFGVSKCGTSSLAAWMAHHPALRWVSNEHMIGVPGEEAHVIDEMGAAGFNEMLAQGTAGKYGRVAPVASE-TDRVIDYTPHFSIKAEVPYRILDIYEDAARNGSTKYIVTLRDPVARAISSWQSK--FDLKVLTEDYDA--------EEEAKHISETRFLAEAVRQGEEGVIAHERCLERELQLAGGSWNPELKREVDLERC 2517
+G RC NV FGVSK GT+SLA W++ HP ++++ G P E + A E R+AP A +D V+DYTPH+++ EVPYRI + + + STK+IV LR+P RAISSW+ K + LK E Y + + A H L +++ +G C+E E+ A + +DL+ C
Sbjct: 1 AGQTRCLPNVVFFGVSKAGTTSLAHWLSQHPQVKFMG-----GRPSESRAYLKGRTLADIRERSK--------RLAPSADPVSDVVVDYTPHYAMVPEVPYRICHLLDCS----STKFIVLLREPAERAISSWRFKERYKLKRDPEAYISALNAMRAGQPTASHHHAPELLTKSMERGMAKAAEWLACVEVEVAAAAAAGRNVTADAIDLQLC 196
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: A0A8J2SXJ9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXJ9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 3.800e-15 Identity = 80/270 (29.63%), Postives = 116/270 (42.96%), Query Frame = 1
Query: 1942 FLFGVSKCGTSSLAAWMAHHPALRWVSNEHMIGVPGEEAHVIDEMGAAGFNEMLA-----QGTAGKYGRVAPVASETDRVIDYTPHFSIKAE-VPYRILDIYE--DAARNGSTKYIVTLRDPVARAISSWQSKFDLKVLTEDYDAEEEAKHISETRFLAEAVRQGEEGVIAHERCLERELQLAGGSWNPELKREVDLERCRLRDFLGATHLLYWAHVAKGIYTMQLERWFSLVGRENIKVLFLEETALDPVGALSEILEFIGLDLVDEEG 2727
F G SKC TSS+AA +A HPA+ + + G EAHV D A A Q K + +AS ++YTP + +A VP + + AAR + +++VTLR+PVARA+SSWQ K ETR V +G CL A G + R ++R G + +HV KG+Y QL WF+ V RE V+ +E+ + L+ +L F+G+ + G
Sbjct: 25 FFIGSSKCATSSIAAALARHPAITSHAGQGGQG----EAHVFDGDHRAHVKNAKALLRRLQAKLRKNPKPGALAS-----MEYTPEYLFEANHVPACLCGALQLTAAARCANRRFLVTLREPVARAVSSWQFK--------------SRAGGGETRSFRRVVEEGAALARGMRACLR-----AHGGGDRAAVRACPIDRYLTPPPHGHHQQISLSHVGKGLYVYQLRAWFARVPRERFLVVPIEQFYANATDGLARVLAFVGVPALGARG 266
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Match: L1J6M3_GUITC (Sulfotransfer_1 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6M3_GUITC) HSP 1 Score: 80.9 bits (198), Expect = 1.060e-12 Identity = 75/268 (27.99%), Postives = 113/268 (42.16%), Query Frame = 1
Query: 1921 QRCQANVFLFGVSKCGTSSLAAWMAHHPALRWVSNEHMIGVPGEEAHVIDEMGAAGFNEMLAQGTAGKYGRVAPVASETDRVIDYTPHFSIKAEVPYRILDIYEDAARNGSTKYIVTLRDPVARAISSWQSKFDLKVLTEDYDAEEEAKHISETRFLAEAVRQGEEGVIAHERCLERELQLAGGSWNPELKREVDLERCRLRDFLGATH--LLYWAHVAKGIYTMQLERWFSLVGRENIKVLFLEETALDPVGALSEILEFIGLDLVD 2718
++ + + L G SKCGTSS+ ++ P + S MI E I ++ L +G +A YTPH+ PY + ++ + +++V LR+PVARA+SS+ KV TE E+R LAEA+ AG ++ ++ ++ L D H L+ HV KG+Y QL RW + +E V LEE + DPVG LSE+L IG+ D
Sbjct: 33 RKFRPDFMLLGSSKCGTSSVIRYLLAVPEVSLASRVGMIETQEEIQDCI------AYSSRLQEGQGASASMLA----------HYTPHYIYHPMTPYNLERLF---GSEHNIRFLVMLREPVARAVSSYY----FKVKTE-----------RESRTLAEAIS-------------------AGIQYHTNMRHKIIYIDKTLPD-CPPLHDPNLFNDHVGKGVYHEQLRRWMHIFPKERFYVCTLEEFSQDPVGKLSEMLSHIGMSEED 246 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig918.20122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig918.20122.1 >prot_S-firma_M_contig918.20122.1 ID=prot_S-firma_M_contig918.20122.1|Name=mRNA_S-firma_M_contig918.20122.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=628bp MAGDPTTIASRRVLAIVTLVVACGGGSCGGVRGSYTVSAQQPTIYSAGMLback to top mRNA from alignment at S-firma_M_contig918:20234..25852- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig918.20122.1 ID=mRNA_S-firma_M_contig918.20122.1|Name=mRNA_S-firma_M_contig918.20122.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=5619bp|location=Sequence derived from alignment at S-firma_M_contig918:20234..25852- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig918:20234..25852- >mRNA_S-firma_M_contig918.20122.1 ID=mRNA_S-firma_M_contig918.20122.1|Name=mRNA_S-firma_M_contig918.20122.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=3768bp|location=Sequence derived from alignment at S-firma_M_contig918:20234..25852- (Sphaerotrichia firma Sfir_13m male)back to top |