mRNA_S-firma_M_contig9164.20105.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: D8LBW2_ECTSI (Signal peptide peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW2_ECTSI) HSP 1 Score: 318 bits (814), Expect = 1.420e-99 Identity = 171/223 (76.68%), Postives = 194/223 (87.00%), Query Frame = 1
Query: 1 RVLVSDKRRATLIRRAKKNADKIMKKLDMGVGSPRLFIGAPKYLKRVRRNRVEGVPGSTGDTTIAVLNAQGAIVDSAGPGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEILSTRSFTEEEDAYFGRGAMA 669
R + S+KR+ L+ RA+++ K KL +GV SP++ + AP YLK+VR+N+VEGVPG GD TIAVLNAQGAIV+SA P PGG +LVISNFR+MAS II +KSI GVVVR+SSPGGDA+ASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSA+LKIGELL+KIGITSE ISKGKYAE+ S RSFT EEDAYFGRGAMA
Sbjct: 405 REMASNKRK--LMSRARRDV-KNGGKLKLGVQSPKMIVDAPLYLKKVRKNKVEGVPGVKGDRTIAVLNAQGAIVNSAAPSPGGAINLVISNFRDMASTIIADKSIDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKIGITSELISKGKYAELFSARSFTAEEDAYFGRGAMA 624
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: A0A5J4Z7N2_PORPP (Serine protease SPPA, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7N2_PORPP) HSP 1 Score: 151 bits (381), Expect = 1.150e-38 Identity = 87/194 (44.85%), Postives = 124/194 (63.92%), Query Frame = 1
Query: 91 VGSPRLFIGAPKYLKRVRRNRVEGVPGSTG-DTTIAVLNAQGAIVDS-AGPGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEI-LSTRSFTEEEDAYFGRGA 663
V +P + KYL+ +R+ G+ +G +A++ A GAI +G P G+S+ E+ + +K +K V++R+ SPGG A ASD+MWRE+R+LRE K V+AS+ DVAASGGYY++M C+ IV +E ++TGSIGVV+A L + EL KIG E +S+GKYAE+ + RSFT EE YF GA
Sbjct: 351 VQAPLRSVALRKYLRT--SSRLLGLVRRSGRKNVVALIRANGAINSGRSGSSPLQGDSVGSETLIELLRQARNDKRVKAVILRVDSPGGSALASDVMWRELRKLREK-KPVIASMGDVAASGGYYLSMACDEIVAEERTLTGSIGVVTAKLSLEELFKKIGFVRENLSRGKYAELFVDNRSFTREEAEYFRAGA 541
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: A0A8D9MCA7_BRACM ((field mustard) hypothetical protein n=2 Tax=Brassica TaxID=3705 RepID=A0A8D9MCA7_BRACM) HSP 1 Score: 149 bits (377), Expect = 7.970e-38 Identity = 90/195 (46.15%), Postives = 115/195 (58.97%), Query Frame = 1
Query: 103 RLFIGAPKYLKRVRRNRVEGVPGST-----GDTTIAVLNAQGAIVDSAGPGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEILST--RSFTEEEDAYFGRGAM 666
RL + K L V + GV ST G IA++ A G+I GP G S+V E + +NK K V+RI SPGGDA ASDLMWRE++ L E+ K VVAS++DVAASGGYY+AM IV + L++TGSIGVV+A + +L +KIG E IS+GKYAE+L R F EE FG+ A
Sbjct: 1252 RLGVEKDKKLPTVDYKKYSGVKKSTIGLSGGRDQIAIIRAGGSISRVKGPLSTPGSSIVAEQLIEKIRSVRENKKYKAAVIRIDSPGGDALASDLMWREIKLLAEA-KPVVASMSDVAASGGYYMAMAANTIVAENLTLTGSIGVVTARFTLAKLYEKIGFNKETISRGKYAELLGAEERPFKPEEAELFGKSAQ 1445
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: A0A5J4XEF2_9CHLO (Protease 4-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XEF2_9CHLO) HSP 1 Score: 148 bits (373), Expect = 1.060e-37 Identity = 83/166 (50.00%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 169 GSTGDTTIAVLNAQGAIVDSAGPGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEIL-STRSFTEEEDAYFGRGA 663
G TG TIA++ + GAIV G G G + F + + ++KS++ VV+R+ SPGGDA ASDLMWRE+R+L K VVAS+ DVAASGGYY+AMG +IV + L+ITGSIGVV+ + EL ++ + ISKGKYAE+ +TRSFT EE+ F R A
Sbjct: 310 GLTGRKTIAIVRSSGAIVGGEGGIGGTGSVITAGAFIKQLRSLAKDKSVQAVVLRVDSPGGDALASDLMWREIRQLAAK-KPVVASMGDVAASGGYYMAMGASKIVAEPLTITGSIGVVTGKFNLEELYRRVQYSKVVISKGKYAELNGNTRSFTPEEEDLFDRSA 474
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: A0A7S1TAP7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAP7_9RHOD) HSP 1 Score: 147 bits (372), Expect = 2.040e-37 Identity = 84/183 (45.90%), Postives = 112/183 (61.20%), Query Frame = 1
Query: 133 KRVRRNRVEGVPGST----GDTTIAVLNAQGAIVDSAGPGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEI-LSTRSFTEEEDAYFGRGAM 666
+ VR N+ V ST G +A++ A GAI G SL E + + K +K +++RI SPGG A ASDLMW E+R +RE K ++AS+ DVAASGGYYIAM C RIVC+ +ITGS+GVV+A L +GEL ++G+ E ISKG YAE+ R+ E+E YF RGA+
Sbjct: 363 RAVRTNQYCRVKDSTLGIAGKPVVAIIRANGAI----NTGKSTSSSLGCDTLIEQVRQAGKRKDVKAIILRIDSPGGSALASDLMWGELRAVREK-KPIIASMVDVAASGGYYIAMACNRIVCERSTITGSVGVVTAKLSLGELYQRVGLQREDISKGAYAELDTEYRALNEDEGRYFERGAL 540
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: A0A1Y1I4A6_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4A6_KLENI) HSP 1 Score: 147 bits (371), Expect = 3.290e-37 Identity = 95/208 (45.67%), Postives = 125/208 (60.10%), Query Frame = 1
Query: 52 KNADKIMKKLDMGVGSPRLFIGAPKYLKRVRRNRVEGVPGSTGDTTIAVLNAQGAIVDSAG--PGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEI-LSTRSFTEEEDAYFGRGAM 666
K AD+I + L G + A Y +R R + E G TG IAV+ A G I G G G G +I R + NK IK V++RI SPGGDA ASDLMWRE++ + + K V+AS+ DVAASGGYY+AMG + IV ++L+ITGSIGVV+ + EL + G + E IS+GK+AE+ RSFTEEE+ YF + AM
Sbjct: 374 KYADEIEEDLKKRTGGKEDKVLAVDY-RRYSRVK-EKTLGLTGRDRIAVIRAAGGISRGKGGRTGSGIGSDALIQQLRRVRD----NKRIKAVILRIDSPGGDALASDLMWRELQMVAKE-KPVIASMVDVAASGGYYMAMGTDTIVAEDLTITGSIGVVTGKFSLAELYKRAGFSKEIISRGKFAELNADNRSFTEEEEDYFAKSAM 574
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: E1Z8K6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z8K6_CHLVA) HSP 1 Score: 147 bits (370), Expect = 4.090e-37 Identity = 88/185 (47.57%), Postives = 115/185 (62.16%), Query Frame = 1
Query: 112 IGAPKYLKRVRRNRVEGVPGSTGDTTIAVLNAQGAIVDSAGPGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEILS-TRSFTEEEDAYFGRGA 663
+G KY K VR + G TG +AV+ A GAI G G G + + +NK++ VV+RI SPGG+A ASDLMWREVR L ++ K VVAS+ADVAASGGYY+AM C +IV + L+ITGSIGVV+ + L +K+G E ISKGKYA++L+ + FT EE+A F A
Sbjct: 344 VGYRKY-KSVRPSTF----GFTGKKAVAVIRASGAIT---GTSNGTGGRITSGEVIAQLRSVKKNKNVAAVVLRIDSPGGEALASDLMWREVRELAKT-KPVVASMADVAASGGYYMAMACSKIVAEPLTITGSIGVVTGKFNLKSLYEKLGYAKENISKGKYAQLLAENKKFTPEEEALFDASA 519
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: A0A0R0JK38_SOYBN (Peptidase_S49 domain-containing protein (Fragment) n=1 Tax=Glycine max TaxID=3847 RepID=A0A0R0JK38_SOYBN) HSP 1 Score: 140 bits (353), Expect = 7.430e-37 Identity = 82/183 (44.81%), Postives = 113/183 (61.75%), Query Frame = 1
Query: 124 KYLKRVRRNRVEGVPGSTGDTTIAVLNAQGAIVDSAGPGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEILST--RSFTEEEDAYFGRGAM 666
KY RVR+ V G+PG G IA++ A G+I ++ F E + ++K K ++RI SPGGDA ASDLMWRE+R L S K V+AS++DVAASGGYY+AMG + IV + L++TGSIGVV+ +G+L +KIG E +S+GKYAE+L+ R F +E F + A
Sbjct: 1 KY-SRVRKWTV-GIPG--GKELIAIIRASGSISRVESQLSVSSSGIIAEKFIEKIRTVRESKEFKAAIIRIDSPGGDALASDLMWREIRLLAAS-KPVIASMSDVAASGGYYMAMGADVIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEILSRGKYAELLAAEQRPFRPDEAELFAKSAQ 178
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: A0A5B8MID5_9CHLO (Serine protease n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MID5_9CHLO) HSP 1 Score: 145 bits (365), Expect = 1.270e-36 Identity = 80/160 (50.00%), Postives = 108/160 (67.50%), Query Frame = 1
Query: 190 IAVLNAQGAIVDSAGPGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEI-LSTRSFTEEEDAYFGRGAM 666
IAV+ + GAI AG G + + F + + +NK +K VV+RI SPGGDA ASDLMW E+R L + K VVAS+ DVAASGGYY++M C++IV + L++TGSIGVV+ + EL +K+G SER+SKGKYAE+ S+R+F + E YF GA
Sbjct: 337 IAVVRSSGAISRDAGAT---GSGISSNAFIKSIKGLKKNKMVKAVVLRIDSPGGDALASDLMWNEIRELAKV-KPVVASMVDVAASGGYYMSMACDKIVAESLTLTGSIGVVTGKFNLEELNEKVGFNSERVSKGKYAELNTSSRAFKDFEHEYFKAGAQ 492
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Match: A0A7S3CDR2_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CDR2_9CHLO) HSP 1 Score: 144 bits (364), Expect = 2.040e-36 Identity = 78/160 (48.75%), Postives = 108/160 (67.50%), Query Frame = 1
Query: 190 IAVLNAQGAIVDSAGPGPGGGESLVISNFREMASEIIQNKSIKGVVVRISSPGGDAAASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSAMLKIGELLDKIGITSERISKGKYAEI-LSTRSFTEEEDAYFGRGAM 666
IAV+ + GAI S P + S F + +NK++K VV+RI SPGGDA ASDLMW E+R L ++ K VVAS+ DVAASGGYY++M C++IV + L++TGSIGVV+ + EL +K+G +ER+S+GKYAE+ S+R+F + E YF GA
Sbjct: 360 IAVVRSSGAI--SRDPSGVSSNGISSSAFIRAIKNLKKNKAVKAVVLRIDSPGGDALASDLMWNEIRELAKT-KPVVASMVDVAASGGYYMSMACDKIVAEPLTLTGSIGVVTGKFNLEELNEKVGFNTERVSRGKYAELNTSSRAFEDHEYEYFAAGAQ 516 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9164.20105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9164.20105.1 >prot_S-firma_M_contig9164.20105.1 ID=prot_S-firma_M_contig9164.20105.1|Name=mRNA_S-firma_M_contig9164.20105.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=223bp RVLVSDKRRATLIRRAKKNADKIMKKLDMGVGSPRLFIGAPKYLKRVRRNback to top mRNA from alignment at S-firma_M_contig9164:425..3215+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9164.20105.1 ID=mRNA_S-firma_M_contig9164.20105.1|Name=mRNA_S-firma_M_contig9164.20105.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2791bp|location=Sequence derived from alignment at S-firma_M_contig9164:425..3215+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9164:425..3215+ >mRNA_S-firma_M_contig9164.20105.1 ID=mRNA_S-firma_M_contig9164.20105.1|Name=mRNA_S-firma_M_contig9164.20105.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1338bp|location=Sequence derived from alignment at S-firma_M_contig9164:425..3215+ (Sphaerotrichia firma Sfir_13m male)back to top |