mRNA_S-firma_M_contig9155.20096.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: A0A6H5KPF3_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPF3_9PHAE) HSP 1 Score: 423 bits (1088), Expect = 1.350e-143 Identity = 188/228 (82.46%), Postives = 207/228 (90.79%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETMAGTKPGMPFMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIYYGNNSTLNKWFYGTHLKHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTLVS 684
Q+W+KFCFTGGIVEIRA LPGR D+GGLWPAMWLMGNLARATYTASSDFTWPWSYN+CNRTT+EQA WQ+QQE+SACD SVHYGFHPN GRGAPEID+LETMAGT PG+PFMSTS QV+PGTSIE RPTEG VP PGTWYE+GI YG NSTLNKWFYG L+H LP KSY+ADAVSSNHVLS+THFED+HT+RLDWQPGGG++ +KGYLRWYLDDE LYGI DTL S
Sbjct: 170 QSWDKFCFTGGIVEIRAILPGRPDIGGLWPAMWLMGNLARATYTASSDFTWPWSYNKCNRTTDEQADWQRQQEVSACDASVHYGFHPNTGRGAPEIDLLETMAGTGPGLPFMSTSFQVAPGTSIEERPTEGTVPHPGTWYEEGILYGKNSTLNKWFYGVLLEHDLPGKSYYADAVSSNHVLSETHFEDLHTYRLDWQPGGGDNSSKGYLRWYLDDELLYGITSDTLGS 397
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: A0A835YPV8_9STRA (Beta-1,6-glucan active enzyme, family GH16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV8_9STRA) HSP 1 Score: 285 bits (729), Expect = 1.250e-90 Identity = 133/232 (57.33%), Postives = 163/232 (70.26%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETMAGTKP------GMPFMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIYYGNNSTLNKWFYGTHLKHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTL 678
Q WNKFCFTGGIVE+ A LPG + +GGLWPA+WL+GNLARATYT+SSD+TWPWSY+RC+R+ E A Q QQEISACD H+ P GRGAPEID+LE M G P G P++STS QVSPGT RP G+ P PG WYE GI YG N++ N +FYG+ L H P ++Y+ADA+S+NH LS THF H +RL+WQ G A+GYLRWY+D +YG+ T
Sbjct: 116 QGWNKFCFTGGIVEVSAALPGEAYIGGLWPAIWLLGNLARATYTSSSDYTWPWSYDRCDRSDAEHAAHQIQQEISACDALKHFDMKPFTGRGAPEIDVLEAMPGRDPYSEFVVGKPYISTSFQVSPGTE-RKRPVLGKFPQPGMWYEDGIEYGKNTSQNLYFYGSKLIHDPPSRTYWADAISANHALSPTHFNKQHIYRLEWQGG-----AEGYLRWYIDGAFVYGMTQGTF 341
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: A0A7S3K4P5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4P5_9STRA) HSP 1 Score: 261 bits (668), Expect = 6.590e-82 Identity = 124/231 (53.68%), Postives = 164/231 (71.00%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETMAGTKP---GM--PFMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIYYGNNSTLNKWFYGTHLKHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTL 678
QTWNKFCFTGGIVEIRA LPG++ VGGLWPAMWL+G L+RATY S+D+ WPWSYN+C+R QKQQEI+AC+ + HYG + GRGAPEID+LE M G + G+ P+ S S QV+PG + +RP EG++P G WY KG+ +G N+TLN +FYGT LKH ++Y ADA+S+N L +THF+D HT+RL+W G+ +RWYLD+E ++ + +TL
Sbjct: 54 QTWNKFCFTGGIVEIRARLPGKAKVGGLWPAMWLLGALSRATYVGSTDWIWPWSYNKCDRAL------QKQQEINACEPNPHYGLGSSTGRGAPEIDLLEAMPGDETLNYGLQKPYFSASYQVAPG-KLHDRPVEGKLPYRGQWYSKGLKFGANTTLNAFFYGTTLKHPKKGQTYIADAISANRHLHETHFDDFHTWRLEWSTKEGQQS----IRWYLDNEFIFQVLPETL 273
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: A0A7S2W6G7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6G7_9STRA) HSP 1 Score: 254 bits (648), Expect = 8.770e-80 Identity = 122/232 (52.59%), Postives = 158/232 (68.10%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETMAGTKP------GMPFMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIYYGNNSTLNKWFYGTHLKHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTL 678
Q WNKFCFTGGI+E++A LPG + VGGLWPA+WLMGNLARATY SS++ WPWS+++C+R QKQQ +SAC+ HYG PN GRGAPEIDILE M G+ G P+ STSLQ++PG + NRP G P PG WYE G+ YG NS++N +FYGT D +Y +DA+S N + K +E HT+RL+W+ + +GY+RWY+DDE +YGI +TL
Sbjct: 131 QGWNKFCFTGGILEVKALLPGEAYVGGLWPAIWLMGNLARATYVGSSNWMWPWSFDKCSRDL------QKQQLVSACNPHPHYGMLPNSGRGAPEIDILEAMPGSGALPLSTVGKPYFSTSLQIAPGIEV-NRPQGGVWPGPGMWYE-GMEYGANSSMNIFFYGTRNVKKNQDYTYQSDALSGNTQMDKKKWEQWHTYRLEWETKESDPLREGYIRWYMDDELIYGIRGETL 354
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: A0A7S3XMP4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMP4_HETAK) HSP 1 Score: 254 bits (649), Expect = 3.960e-79 Identity = 124/236 (52.54%), Postives = 154/236 (65.25%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETMAG------TKPGMPFMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIY-YGNNSTLNKWFYGTHL-KHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTLVS 684
Q WNKFCF GGIVEI A LPG+SD+GGLWPAMW+MGNLARAT+T +SD WPWS+++C+ T Q+QQ+ SAC+ HYGF PN GRGAPEIDILE + G T P++S+S QVSPG RP P PG WY G + YGN+S +N +FYG L +Y ADA+S+N L THF+ H +RL+W PG G GYLRWYLD + +YGI D L++
Sbjct: 129 QGWNKFCFVGGIVEISAELPGQSDIGGLWPAMWIMGNLARATFTGTSDNVWPWSFDKCDPTV------QQQQKFSACNNVNHYGFKPNKGRGAPEIDILEVLPGSGGLPDTTTKKPYLSSSFQVSPGLDSMYRPQVDHYPIPGNWYGPGGFLYGNDSAMNIFFYGEKLISREAASLNYLADALSANTNLRPTHFDRQHLYRLEWIPGDG-----GYLRWYLDGQMIYGISQDALIN 353
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: A0A7S2W5Y4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5Y4_9STRA) HSP 1 Score: 254 bits (648), Expect = 1.570e-77 Identity = 122/232 (52.59%), Postives = 158/232 (68.10%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETMAGTKP------GMPFMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIYYGNNSTLNKWFYGTHLKHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTL 678
Q WNKFCFTGGI+E++A LPG + VGGLWPA+WLMGNLARATY SS++ WPWS+++C+R QKQQ +SAC+ HYG PN GRGAPEIDILE M G+ G P+ STSLQ++PG + NRP G P PG WYE G+ YG NS++N +FYGT D +Y +DA+S N + K +E HT+RL+W+ + +GY+RWY+DDE +YGI +TL
Sbjct: 131 QGWNKFCFTGGILEVKALLPGEAYVGGLWPAIWLMGNLARATYVGSSNWMWPWSFDKCSRDL------QKQQLVSACNPHPHYGMLPNSGRGAPEIDILEAMPGSGALPLSTVGKPYFSTSLQIAPGIEV-NRPQGGVWPGPGMWYE-GMEYGANSSMNIFFYGTRNVKKNQDYTYQSDALSGNTQMDKKKWEQWHTYRLEWETKESDPLREGYIRWYMDDELIYGIRGETL 354
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: A0A6U4E3V7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4E3V7_9STRA) HSP 1 Score: 245 bits (626), Expect = 5.830e-75 Identity = 118/232 (50.86%), Postives = 158/232 (68.10%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETMAG------TKPGMPFMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIYYGNNSTLNKWFYGTHLKHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTL 678
Q WNKFCF+GG VE+ A LPG +D GLWPA+WL+GNLARATY +SSD+ WPWSY+ C T E A QQE+S C + HYG H + GRGAPEIDILE M G T P++S+SLQVSPG E RP G P G+WYE G++Y NS++N +FYG L+H + SY ADA+S+N +++T F MHT+R++W+P D KG++ W++D ++++GID + L
Sbjct: 98 QGWNKFCFSGGAVEVSAQLPGNADTSGLWPALWLLGNLARATYVSSSDYMWPWSYDSCPHKTPEVA---VQQELSHCRATPHYGLHAHQGRGAPEIDILEAMPGNEALLRTPINKPYLSSSLQVSPGLP-EPRPVLGHPPQNGSWYE-GMHYAENSSVNIFFYGVKLEHKPTEYSYQADAISANTNINETLFNAMHTYRVEWEPPTSHD--KGHIHWFIDGKKIFGIDGENL 322
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: A0A7S1FMP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMP1_9STRA) HSP 1 Score: 238 bits (606), Expect = 2.620e-74 Identity = 122/235 (51.91%), Postives = 153/235 (65.11%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETMAGTKPGMP-------FMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIYYGNNST--LNKWFYGTHLKHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTL 678
Q WNKFC TGGIVEI A LPG GLWPAMWL+GNLARATY SS+F WP+SY+ C+ + + QEISAC++ HY HP GRGAPEIDI+E MAGT +P + STSLQV+PG NRP G P GTWY G+ YG N T LN +FYG +L H +Y +DA+S+N LS+THFE H +R++W+P +G GY+RW++D +YGI+D TL
Sbjct: 84 QGWNKFCITGGIVEISAKLPGHVFSAGLWPAMWLLGNLARATYVGSSNFVWPFSYDTCDESN------RISQEISACNKINHYDLHPLQGRGAPEIDIIEVMAGTVEKLPHTMITKPYASTSLQVAPGKKY-NRPRLGTRPVNGTWYN-GLQYGKNLTTDLNPFFYGVNLVHEPAKYTYQSDAISANTQLSQTHFERQHVYRVEWEPSD-VNGRGGYVRWFIDGHFVYGIEDYTL 309
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: F0Y0X7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0X7_AURAN) HSP 1 Score: 244 bits (623), Expect = 2.450e-72 Identity = 124/233 (53.22%), Postives = 155/233 (66.52%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETMAGT---KPGM--PFMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIYYGNNSTLNKWFYGTHLKHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTLVS 684
Q WNKFCFTGGI+EIRA LPGR DVGGLWP MW+MGNLARATY ASS+ WP+SY C R Q++QEI+ C H+G +P+ GRGAPEID+LE M G G+ P+ STSLQ++P I RP G PAPGTWYE + YG N++ N +FYG L H ++SY+ADAVS N + + FED HT+RL+W+P KG + WY D + LYGIDD ++ S
Sbjct: 398 QGWNKFCFTGGILEIRAKLPGRYDVGGLWPGMWMMGNLARATYVASSNHMWPFSYEACARKD------QRRQEINGCMPRPHFGLNPDQGRGAPEIDLLEVMPGEGWLPWGLKKPYYSTSLQLAPAAPI--RPFNGAKPAPGTWYEH-LRYGPNTSQNVFFYGMRLDHGSDEESYWADAVSGNTPIGASEFEDFHTYRLEWKP-------KGSIDWYKDGKFLYGIDDASISS 614
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Match: A0A1Z5KJ45_FISSO (GH16 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJ45_FISSO) HSP 1 Score: 236 bits (603), Expect = 1.270e-71 Identity = 119/237 (50.21%), Postives = 156/237 (65.82%), Query Frame = 1
Query: 1 QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTWPWSYNRCNRTTEEQAGWQKQQEISACDESVHYGFHPNMGRGAPEIDILETM---AGTKPGM----PFMSTSLQVSPGTSIENRPTEGQVPAPGTWYEKGIYYGNNST----LNKWFYGTHLKHSLPDKSYFADAVSSNHVLSKTHFEDMHTFRLDWQPGGGEDGAKGYLRWYLDDEQLYGIDDDTL 678
Q+WNKFCF GGI+E RA LPG +GGLWPA+W++GNLARATY SSD+ WP+SYNRC+ T + QEI AC + HYG GRGAPEIDI+E M AG P P+ STSLQ++PG I+ RP G+ P G WYE + YGN++ LN +FYG L H +Y ADA+S+N L+ TH+ MH +R++W+P EDG+ GYLRWY D++ ++GI+ D+L
Sbjct: 137 QSWNKFCFVGGIIEFRAKLPGDPKIGGLWPALWMLGNLARATYVGSSDYMWPYSYNRCDSRT------RISQEIDACAKVNHYGMQAYTGRGAPEIDIIEAMQGEAGKLPSTYIQRPYQSTSLQIAPGVEID-RPILGKRPHEGHWYED-LDYGNSTNVTVDLNPFFYGVTLVHKPKQYTYQADAISANLQLNDTHYNSMHLYRVEWEPPA-EDGSGGYLRWYTDEKFVFGINGDSL 364 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9155.20096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9155.20096.1 >prot_S-firma_M_contig9155.20096.1 ID=prot_S-firma_M_contig9155.20096.1|Name=mRNA_S-firma_M_contig9155.20096.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=229bp QTWNKFCFTGGIVEIRATLPGRSDVGGLWPAMWLMGNLARATYTASSDFTback to top mRNA from alignment at S-firma_M_contig9155:150..4192+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9155.20096.1 ID=mRNA_S-firma_M_contig9155.20096.1|Name=mRNA_S-firma_M_contig9155.20096.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=4043bp|location=Sequence derived from alignment at S-firma_M_contig9155:150..4192+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9155:150..4192+ >mRNA_S-firma_M_contig9155.20096.1 ID=mRNA_S-firma_M_contig9155.20096.1|Name=mRNA_S-firma_M_contig9155.20096.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1374bp|location=Sequence derived from alignment at S-firma_M_contig9155:150..4192+ (Sphaerotrichia firma Sfir_13m male)back to top |