mRNA_S-firma_M_contig914.20085.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: A0A6H5JZI5_9PHAE (ATP synthase subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZI5_9PHAE) HSP 1 Score: 438 bits (1127), Expect = 2.560e-150 Identity = 226/233 (97.00%), Postives = 232/233 (99.57%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFTTSFTN 699
QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDA+GNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDV+KVTAYEKAWL HIKASHSSDILEGIKKDNYELTDDMQ+KL++VCDEFTTSFT+
Sbjct: 319 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDASGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVNKVTAYEKAWLAHIKASHSSDILEGIKKDNYELTDDMQQKLASVCDEFTTSFTS 551
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: A0A836CH44_9STRA (ATP synthase subunit alpha n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH44_9STRA) HSP 1 Score: 395 bits (1016), Expect = 1.680e-133 Identity = 199/231 (86.15%), Postives = 218/231 (94.37%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFTTSF 693
QMSLLLRRPPGREAYPGDVFYLHSRLLER+AK+G A GNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDA+TQQQLNRGVRLYELLKQ+QY P+EVE+QVVILFAGVKGF+D++ V++V AYEKAWLEHIK +H ++LEGIKKD YELT M ++LS +CD+FTT+F
Sbjct: 316 QMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMGAAMGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDAATQQQLNRGVRLYELLKQNQYQPMEVEDQVVILFAGVKGFVDKIAVNQVQAYEKAWLEHIKTAHKDEVLEGIKKDKYELTKPMMERLSKICDDFTTAF 546
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: A0A6V2WS15_HETAK (ATP synthase subunit alpha n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2WS15_HETAK) HSP 1 Score: 370 bits (949), Expect = 1.990e-123 Identity = 191/232 (82.33%), Postives = 207/232 (89.22%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFTTSFT 696
QMSLLLRRPPGREAYPGDVFYLHSRLLERAAK+ D G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQ K MKQVAGTMKLELAQYREVAAFAKFGSDLDA+TQQQLNRGVRLYELLKQ QY PLEVEEQVV+LFAGV+GFIDRVDV VT +EKAWL H K +H L IKK+ Y ++D+M KK + +C+EFT+SF+
Sbjct: 316 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDTFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYREVAAFAKFGSDLDAATQQQLNRGVRLYELLKQPQYQPLEVEEQVVVLFAGVRGFIDRVDVAAVTDFEKAWLAHCKNNHYDATLGAIKKNKYAISDEMDKKFTELCEEFTSSFS 547
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: A0A6U4D8B6_9STRA (ATP synthase subunit alpha n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D8B6_9STRA) HSP 1 Score: 368 bits (944), Expect = 8.370e-123 Identity = 193/233 (82.83%), Postives = 210/233 (90.13%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFTTSFTN 699
QMSLLLRRPPGREAYPGDVFYLHSRLLERAAK+GDA G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQ K MKQVAGTMKLELAQYREVAAFAKFGSDLD +TQQQLNRGVRLYELLKQ Q+ PLE EEQ+V+LFAGVKG++DRVDV VTA+E AWL H+K+SHS DI++ IK Y + D ++ KL VCDEFTTSFT+
Sbjct: 308 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMGDAFGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYREVAAFAKFGSDLDPATQQQLNRGVRLYELLKQPQFEPLETEEQIVVLFAGVKGYLDRVDVASVTAFETAWLNHVKSSHS-DIIDMIKS-KYVMDDAIEGKLHKVCDEFTTSFTS 538
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: A0A7S3I9N8_9CILI (Hypothetical protein (Fragment) n=1 Tax=Fabrea salina TaxID=342563 RepID=A0A7S3I9N8_9CILI) HSP 1 Score: 358 bits (918), Expect = 5.820e-122 Identity = 184/228 (80.70%), Postives = 209/228 (91.67%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFT 684
QMSLLLRRPPGREAYPGDVFYLHSRLLERAAK+ DA+G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQ K MKQV+GTMKL+LAQYREVAAFAKFGSDLDA+TQQQLNRGVRLYEL+KQDQY P+EVEEQVV+LFAGV+G+IDR+DV +VT +EKAWL+ +KA+HS IL IK E++ ++ KL+++CDEF+
Sbjct: 92 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDASGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQVKAMKQVSGTMKLDLAQYREVAAFAKFGSDLDAATQQQLNRGVRLYELIKQDQYQPMEVEEQVVVLFAGVRGYIDRIDVAQVTTFEKAWLDFVKANHSG-ILSEIKTKK-EISKELDAKLASICDEFS 317
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: A0A7S2W4M6_9STRA (ATP synthase subunit alpha n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4M6_9STRA) HSP 1 Score: 360 bits (923), Expect = 1.360e-119 Identity = 185/232 (79.74%), Postives = 211/232 (90.95%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFTTSFT 696
QMSLLLRRPPGREAYPGDVFYLHSRLLERAAK+ D G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQ K MKQV+GTMKL+LAQY+EVAAFAKFGSDLDA+TQQQLNRGVRLYEL+KQDQY P+EVEEQV++LFAGV+G+IDR+DV +VT++EKAWLE +K +HS IL IK E++ D+ KLSA+CDEF++S++
Sbjct: 311 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVNGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQIKAMKQVSGTMKLDLAQYQEVAAFAKFGSDLDAATQQQLNRGVRLYELIKQDQYQPMEVEEQVLVLFAGVRGYIDRIDVAQVTSFEKAWLEFVKTNHSG-ILSEIKTKK-EISKDLDAKLSAICDEFSSSYS 540
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: A0A7S2BTT7_9STRA (ATP synthase subunit alpha n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BTT7_9STRA) HSP 1 Score: 358 bits (919), Expect = 9.570e-119 Identity = 187/233 (80.26%), Postives = 211/233 (90.56%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFTTSFTN 699
QMSLLLRRPPGREAYPGDVFYLHSRLLERAAK+ DA G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQ K MKQV+GTMKL+LAQ+ EVAAFAKFGSDLDA+TQQQLNRGVRL ELLKQDQYVP E EEQVVILFAGV+G+IDRVDV +V A+EKAWL+ IK SH D+L IK+ E+T ++ +KLSA+CD+F+++F++
Sbjct: 330 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDALGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQIKAMKQVSGTMKLDLAQFTEVAAFAKFGSDLDAATQQQLNRGVRLQELLKQDQYVPYEAEEQVVILFAGVRGYIDRVDVSQVQAFEKAWLDFIKLSHP-DVLSTIKEQK-EITKELDEKLSALCDDFSSNFSS 560
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: A0A8J2SM38_9STRA (ATP synthase subunit alpha n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM38_9STRA) HSP 1 Score: 357 bits (916), Expect = 1.260e-118 Identity = 183/232 (78.88%), Postives = 204/232 (87.93%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFTTSFT 696
QMSLLLRRPPGREAYPGDVFY+HSRLLERAAK+G AG GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLE+ELFYQGQRPAISVGLSVSRVGSAAQ K MKQV+GTMKL+LAQYREVAAFAKFGSDLD +TQQQLNRGVRLYELLKQ QYVPLE EEQVVILFAGV+G+ID VDV + YEKAWLEH+K+SH +++ I D Y ++D ++KL A C+ FT F+
Sbjct: 303 QMSLLLRRPPGREAYPGDVFYIHSRLLERAAKMGKMAGEGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLENELFYQGQRPAISVGLSVSRVGSAAQVKAMKQVSGTMKLDLAQYREVAAFAKFGSDLDPATQQQLNRGVRLYELLKQAQYVPLECEEQVVILFAGVRGYIDAVDVSAIQDYEKAWLEHVKSSHGG-LIKAIVDDGYVISDATEEKLGAACEAFTAQFS 533
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: F0YIV3_AURAN (ATP synthase subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIV3_AURAN) HSP 1 Score: 353 bits (907), Expect = 9.690e-118 Identity = 182/232 (78.45%), Postives = 205/232 (88.36%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFTTSFT 696
QMSLLLRRPPGREAYPGDVFY+HSRLLERAAK+G AAG GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLE+ELFYQGQRPAISVGLSVSRVGSAAQ K MKQVAGTMKL+LAQYREVAAFAKFGSDLD +TQQQLNRGVRLYELLKQ QY PLE EEQV+ILFAGV+G+ID VDV + YEKAWL+H+K SH DI++ I + + ++D + KL VC++FT +F+
Sbjct: 267 QMSLLLRRPPGREAYPGDVFYIHSRLLERAAKMGKAAGLGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLENELFYQGQRPAISVGLSVSRVGSAAQVKAMKQVAGTMKLDLAQYREVAAFAKFGSDLDPATQQQLNRGVRLYELLKQGQYQPLECEEQVIILFAGVRGYIDAVDVSAIQDYEKAWLDHVKTSHP-DIMKTIVGEGFVISDATEAKLGKVCEDFTAAFS 497
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Match: A0A482SHI5_9ARCH (H(+)-transporting two-sector ATPase n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482SHI5_9ARCH) HSP 1 Score: 348 bits (892), Expect = 9.720e-116 Identity = 179/232 (77.16%), Postives = 201/232 (86.64%), Query Frame = 1
Query: 1 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQRKCMKQVAGTMKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGVKGFIDRVDVDKVTAYEKAWLEHIKASHSSDILEGIKKDNYELTDDMQKKLSAVCDEFTTSFT 696
QMSLLLRRPPGREAYPGDVFYLHSRLLERAAK+GDA G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQ K MKQVAGTMKLELAQYREVAAFAKFGSDLD STQ+QLNRGVRLYELLKQ QY P+E+E+ VV LF GVKGF DRVDV KV+ + KAWL IK +H +++ + K+ + +T D++ + + +EFT S+T
Sbjct: 246 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMGDALGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYREVAAFAKFGSDLDPSTQKQLNRGVRLYELLKQGQYQPMEMEDIVVTLFIGVKGFADRVDVAKVSDFAKAWLSFIKTNHKEKVIDAMIKEKFTITKDIEATMIKLAEEFTASYT 477 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig914.20085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig914.20085.1 >prot_S-firma_M_contig914.20085.1 ID=prot_S-firma_M_contig914.20085.1|Name=mRNA_S-firma_M_contig914.20085.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=233bp MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGDAAGNGSLTALPIIETQback to top mRNA from alignment at S-firma_M_contig914:24374..26688- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig914.20085.1 ID=mRNA_S-firma_M_contig914.20085.1|Name=mRNA_S-firma_M_contig914.20085.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2315bp|location=Sequence derived from alignment at S-firma_M_contig914:24374..26688- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig914:24374..26688- >mRNA_S-firma_M_contig914.20085.1 ID=mRNA_S-firma_M_contig914.20085.1|Name=mRNA_S-firma_M_contig914.20085.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1398bp|location=Sequence derived from alignment at S-firma_M_contig914:24374..26688- (Sphaerotrichia firma Sfir_13m male)back to top |