mRNA_S-firma_M_contig911.20055.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: A0A6H5JUF1_9PHAE (Thioesterase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF1_9PHAE) HSP 1 Score: 400 bits (1029), Expect = 2.520e-133 Identity = 193/259 (74.52%), Postives = 220/259 (84.94%), Query Frame = 1
Query: 79 MSSAALEKWVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHLVNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQGQGEPAVLEALSDVL 855
MSS+ALEKWVVCRR + DAS+RLFCAAWAGGSA+SFNKW +++PEAVELHAL+ PGRM RSKE+ LTS+ IVE A+AL+ GLLDKPFA+FGHSFGSLVMFEL RKL E AGK P+ L+VSGC PPDMCVG G SP +SQLPRDALVDHL+ LGGMP ELRDQTELVDYFLPPIRADYTA+E YRY PRP DD P I+CP++CLGGEED AP+SDLE W+S T G+FRL+MF GGHFFLQG+GE AVL L +VL
Sbjct: 1 MSSSALEKWVVCRRVKADASIRLFCAAWAGGSASSFNKWTSKMPEAVELHALEFPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLLDKPFALFGHSFGSLVMFELARKLKEDAGKIPVYLVVSGCCPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAYEGYRYEPRPGDDSRP-ITCPIICLGGEEDGGAPRSDLELWSSLTAGEFRLQMFGGGHFFLQGEGEQAVLTFLGNVL 258
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: A0A2V8RTA5_9BACT (Putative thioesterase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8RTA5_9BACT) HSP 1 Score: 187 bits (474), Expect = 4.150e-51 Identity = 106/267 (39.70%), Postives = 147/267 (55.06%), Query Frame = 1
Query: 79 MSSAALEKWVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHLVNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQGQGEPAVLEALSDVLAPLY*TET 879
M ++ W+V R P A +RLFC +AGG A +++ WP LP VE+ A+QLPGR SRS+E L ++VE A A++ LD+P+A FGHS G+L+ FEL R+L A +P L VSG R P + P +P + LP V L L G P E+ EL++ LP +RAD+ A +Y Y P P ++CP+ GG +D ++ LE W + TTG F L+M G HF+LQ G +L +L L L T T
Sbjct: 1 MRGSSATPWLVINRPNPQARLRLFCFPYAGGGAATYHAWPGELPTEVEVCAVQLPGRASRSRESPYDRLKQLVEALAPAVLP--YLDRPYAFFGHSMGALIAFELTRRLRREADTSPAHLFVSGRRAPQL---PRTNPPIHDLPEAEFVQALRRLNGTPDEVLAHPELMELMLPLLRADFAAVGTYEYTPEPA------LACPITAYGGLQDHEVSRAQLEAWRTQTTGGFTLRMLPGDHFYLQ-TGRALLLRSLFRELHELLLTTT 255
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: A0A326U590_9CHLR (Surfactin synthase thioesterase subunit n=2 Tax=Thermosporothrix TaxID=768650 RepID=A0A326U590_9CHLR) HSP 1 Score: 185 bits (469), Expect = 1.980e-50 Identity = 96/236 (40.68%), Postives = 139/236 (58.90%), Query Frame = 1
Query: 103 WVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHLVNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQ 810
W++C + A +RL C +AGG A+++ W +LP+ +EL A+QLPG +R KE+ T LP +VE AEAL+ +LD+PFA+FGHS G+L+ FEL R L + A ++P L +SGCR + P P V L + L+D+L G P E+ E++ LP RAD+T +E+Y+Y + E+ P+SCP+ GG +DS+ L+ W T G F M G HFFLQ
Sbjct: 10 WLICPQTAQQARLRLLCLPYAGGGASAYRSWQQQLPDTIELCAVQLPGHETRLKEQAYTHLPSLVEAMAEALLP--VLDRPFAIFGHSMGALLSFELTRYLRKHAQRSPEHLFLSGCRAAHL---PRTEPDVHTLSDEGLIDYLRRFNGTPEEILQNEEMMQLLLPIFRADFTLYETYQY--QHEE----PLSCPITVFGGHQDSSVSYQQLQAWRDHTRGAFAAHMLPGNHFFLQ 234
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: A0A6J4NG05_9BACT (Thioesterase in siderophore biosynthesis gene cluster n=1 Tax=uncultured Gemmatimonadetes bacterium TaxID=203437 RepID=A0A6J4NG05_9BACT) HSP 1 Score: 184 bits (466), Expect = 5.990e-50 Identity = 102/260 (39.23%), Postives = 139/260 (53.46%), Query Frame = 1
Query: 85 SAALEKWVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHLVNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQGQGEPAVLEALSDVLAPL 864
+ +L +W + R P A VRLFC +AGG A+ FN WP LP VE+ +Q PGR +R E + +L E+ + L LLD+PF +FGHS G L+ FE+ R+L G P L+ SG P + P P + LP D +D L G P E+ E+++ P IRAD++ E+YRY P P P+ P+ GGE D P+ +E W TTGDFR++MF G HFFL + VL AL L P+
Sbjct: 4 AGSLNRWTLIPRPNPAARVRLFCFPYAGGGASIFNTWPRALPAEVEVVGVQPPGREARIGEAPIGNLHELADAIHRELTP--LLDRPFVLFGHSNGGLMAFEVARRLRRAGGPMPRLLVASGRPAPQV---PDEDPPIHALPYDEFIDALRRYNGTPEEILANAEIMELLEPVIRADFSLGETYRYDPEP------PLDVPITAFGGERDDEVPRDQVEAWREQTTGDFRMQMFPGDHFFLNSDRDE-VLAALLRELRPI 251
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: A0A6P1A9W5_9CYAN (Thioesterase n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1A9W5_9CYAN) HSP 1 Score: 179 bits (453), Expect = 3.730e-48 Identity = 97/254 (38.19%), Postives = 143/254 (56.30%), Query Frame = 1
Query: 82 SSAALEKWVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHLVNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQGQGEPAVLEAL 843
+++ WV C + P A +RLFC +AGGSA SF W RLP +E+ ++LPGR R E T L +++ +A++ L+KPFA FGHS G+++ FEL + LA+ +P+ L VSG RPP + P P + LP + L G P E+ + EL++ FLP +RAD+ E+Y Y P+P ++CP+ GG +D A SDL+ W T DF L+MF G HFF+ E ++L++L
Sbjct: 3 TTSTFNNWVTCPKPNPQAKLRLFCFHYAGGSALSFRTWADRLPNYIEVCPVELPGRGIRLMEPPFTRLQPLLQALEKAILPS--LNKPFAFFGHSMGAVLSFELAQLLAKNHHLSPVQLFVSGRRPPQI---PDPDPPLHNLPEATFLKELRRYNGTPEEVLNNAELMELFLPTLRADFAVLETYVYTPKPR------LNCPISAFGGWDDWKASASDLQAWEELTNADFSLEMFPGDHFFIYFS-ESSLLQSL 244
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: A0A2V7UAP5_9BACT (Putative thioesterase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7UAP5_9BACT) HSP 1 Score: 177 bits (448), Expect = 2.370e-47 Identity = 102/252 (40.48%), Postives = 141/252 (55.95%), Query Frame = 1
Query: 103 WVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHL-VNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQGQGEPAVLEALSDVL 855
W++ R RP A +RL C +AGG+A+++ W LP +++ +QLPGR SR +E ++V+ AAEAL + LD PFA+FGHS G++V FEL R+L + +P+ L VSG P P P ++QLP V+ L GG+P E+ + EL+ LP +RAD ESY Y P P+ C L C GG++D DLE W T G F L+ F GGHFF++ E VL ALS+ L
Sbjct: 7 WILRSRPRPGARLRLLCFPYAGGAASAYRSWTEALPAEIDVCPIQLPGRGSRFREAPFRRASDLVQAAAEAL--RPYLDLPFALFGHSMGAVVAFELARELRRRSWPSPILLAVSGREAPHR---PDPDPPLAQLPDAEFVEQLRARYGGIPDEVLAEKELLQMLLPVLRADVFLLESYVYAEEP------PLDCTLSCFGGQQDRHLRHEDLEAWREQTRGSFTLRTFPGGHFFIESARE-VVLRALSEDL 246
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: UPI001574BDD2 (alpha/beta fold hydrolase n=1 Tax=Rhizobium skierniewicense TaxID=984260 RepID=UPI001574BDD2) HSP 1 Score: 176 bits (447), Expect = 3.480e-47 Identity = 95/240 (39.58%), Postives = 135/240 (56.25%), Query Frame = 1
Query: 103 WVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHLVNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQGQGE 822
W+ + A VRLFC +AGG+A + WP L V++ L LPGR R +E+ L + +I ++AAEAL+ LD+P+A+FGHS G+ V FE+ R+L P CL VSG P + P + LP DA +D ++ L G P E+ +L+D LP +RAD+ A E+Y P P P++CP+V LGG ED P + +E W +TG FR + F G HFF++ Q E
Sbjct: 14 WITPMPSADRALVRLFCLPYAGGNAALYRDWPKWLGPKVDVCPLHLPGRGRRFREKPLYRVSDIADQAAEALLQH--LDRPYALFGHSMGASVAFEIARRLRRHGAPEPGCLFVSGRSAPHL---PKEGDNIHALPDDAFIDAVMRLNGSPPEVLKHPDLIDLILPTLRADFEAVETYHLTPEP------PLTCPIVALGGREDPDLPATSIEAWRVHSTGTFRHESFPGDHFFIRAQDE 242
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: A0A367RSR1_9NOSO (Gramicidin dehydrogenase n=1 Tax=Nostoc minutum NIES-26 TaxID=1844469 RepID=A0A367RSR1_9NOSO) HSP 1 Score: 176 bits (445), Expect = 5.470e-47 Identity = 98/255 (38.43%), Postives = 135/255 (52.94%), Query Frame = 1
Query: 91 ALEKWVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHLVNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQGQGEPAVLEALSDVL 855
+ WV C + P AS+RLFC +AGGS+ F W A LP VE+ ++LPGR S+ + T L +V A L+ DKPFA FGHS G+LV FE+ R L + P+ L V+G R P + P P V LP A D L L G P + + EL++ +P +RAD+ E+Y Y P+ P+ CP+ GG EDS +++ W T F L+MFDG HFFL + +L++LS L
Sbjct: 6 SFNSWVTCLQPNPQASLRLFCFPYAGGSSLIFRTWSANLPATVEVCPIELPGRGSQMRSAAFTRLEPLVAAIAPTLVPYS--DKPFAFFGHSMGALVSFEVTRLLRQEYNLHPVHLFVAGRRAPQI---PDPKPPVHNLPEPAFKDELRRLNGTPTVVLENPELMELLIPTLRADFAVHETYIYTPQA------PLDCPIAAFGGLEDSEVSYDEIQGWQEQTNAAFSLQMFDGDHFFLHS-AQSLLLKSLSQKL 248
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: A0A1Z4J274_9CYAN (Thioesterase n=3 Tax=Nostocales TaxID=1161 RepID=A0A1Z4J274_9CYAN) HSP 1 Score: 175 bits (444), Expect = 7.380e-47 Identity = 101/259 (39.00%), Postives = 136/259 (52.51%), Query Frame = 1
Query: 79 MSSAALEKWVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHLVNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQGQGEPAVLEALSDVL 855
M+SA + WV C + P AS+RLFC +AGGS+ F W LP VE+ ++LPGR ++ K T L +V+ A L+ LDKPFA FGHS G LV FELVR L + P L VSG R P + P P + LP + L L G P + EL+ +P +RAD+ E+Y Y P P++CP+ GG ED A +L+ W + T F L+MF G HFFL + +L++LS L
Sbjct: 1 MTSARIHSWVTCPQPNPQASLRLFCFPYAGGSSVIFRTWSRSLPTTVEVCPIELPGRGTQMKLPAFTQLQPLVQAIAPVLLPH--LDKPFAFFGHSMGGLVSFELVRLLRKEYNIIPDHLFVSGRRAPQI---PDPKPPIHALPEPEFKEELRRLNGTPEAVLQNAELMQLLVPILRADFAVLETYVYTTEP------PLNCPISAYGGSEDEEASYDELQAWQNQTNAAFSLQMFTGDHFFLHS-AQSVLLQSLSQEL 247
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Match: A0A7V4U0V4_9BACT (Thioesterase n=1 Tax=Caldithrix abyssi TaxID=187145 RepID=A0A7V4U0V4_9BACT) HSP 1 Score: 174 bits (442), Expect = 1.600e-46 Identity = 94/254 (37.01%), Postives = 139/254 (54.72%), Query Frame = 1
Query: 97 EKWVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHALQLPGRMSRSKEECLTSLPEIVERAAEALIAKGLLDKPFAMFGHSFGSLVMFELVRKLAEIAGKTPLCLIVSGCRPPDMCVGPGFSPAVSQLPRDALVDHLVNLGGMPAELRDQTELVDYFLPPIRADYTAFESYRYGPRPEDDDCPPISCPLVCLGGEEDSAAPQSDLEHWASFTTGDFRLKMFDGGHFFLQGQGEPAVLEALSDVLA 858
+ WV + + +A +RLFC +AGG++T+F WP LPE +E+ A+++PG SR E+ + L +V+ AE + LD+PFA FGHS GSL+ FEL L G P+ L SG P + P + LP+ V H+ N G P E+ + EL+D +P +RAD+ E+Y+Y P+P P +CP+ GG +D + + DL+ W T+G F L+MF G HF+L V D+LA
Sbjct: 8 DSWVTIPKPQANARLRLFCLPFAGGNSTAFRNWPDYLPETMEVAAVEIPGHGSRLAEDTIRRLIPLVKAIAEGI--DPYLDRPFAFFGHSMGSLLSFELAHYLRLKKGVEPVHLFFSGRGAPHL---PAREEPIHGLPQAEFVQHIRNYNGTPKEVLEHQELMDILIPILRADFEVCETYQYFPKP------PFNCPITAFGGLQDPSTTKDDLQGWKKHTSGAFNLRMFPGDHFYLLEAQTTLVHTIARDILA 250 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig911.20055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig911.20055.1 >prot_S-firma_M_contig911.20055.1 ID=prot_S-firma_M_contig911.20055.1|Name=mRNA_S-firma_M_contig911.20055.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=264bp MSSAALEKWVVCRRARPDASVRLFCAAWAGGSATSFNKWPARLPEAVELHback to top mRNA from alignment at S-firma_M_contig911:22722..26714- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig911.20055.1 ID=mRNA_S-firma_M_contig911.20055.1|Name=mRNA_S-firma_M_contig911.20055.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3993bp|location=Sequence derived from alignment at S-firma_M_contig911:22722..26714- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig911:22722..26714- >mRNA_S-firma_M_contig911.20055.1 ID=mRNA_S-firma_M_contig911.20055.1|Name=mRNA_S-firma_M_contig911.20055.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1584bp|location=Sequence derived from alignment at S-firma_M_contig911:22722..26714- (Sphaerotrichia firma Sfir_13m male)back to top |