mRNA_S-firma_M_contig9048.19983.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9048.19983.1
Unique NamemRNA_S-firma_M_contig9048.19983.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: D7G4L0_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4L0_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 1.010e-184
Identity = 277/286 (96.85%), Postives = 283/286 (98.95%), Query Frame = 1
Query:    1 QAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDVDSDLDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGXXXXXXXSDVGDR 858
            +AGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLA GIDLK+VAR+THGFVGADIAQLCMEAALACIAEKSHE DVDS+LDAE+LSSLE+TNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGG XXXXXXSDVGDR
Sbjct:  432 KAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLASGIDLKKVARDTHGFVGADIAQLCMEAALACIAEKSHEFDVDSELDAEMLSSLEITNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDR 717          
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: D8LF27_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF27_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 1.240e-143
Identity = 214/274 (78.10%), Postives = 243/274 (88.69%), Query Frame = 1
Query:    1 QAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDVDSD-LDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGG 819
            +AGGE EKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVI+PALRRFGRFDRELDIGIPDE+GRLEVL IKTR MKL   +DL Q+A++THGFVGAD++QLCMEAAL CI E+ H +DVD+D +  EVL  L +TNDHF  AL+  NPS+LRET+VEVP+V+W D+GGLEDVKRELQE +QYPVE+   + KFGMS SKG LFYGPPGCGKTLLAKA+AN+C ANFISVKGPELLSMWFGESEAN+RELF+KARAA+PCILFFDEMDSIA+ RGG
Sbjct:  468 KAGGEVEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIEPALRRFGRFDRELDIGIPDEEGRLEVLRIKTRTMKLDDDVDLIQIAKDTHGFVGADLSQLCMEAALRCIREQMHTIDVDADKIPVEVLDGLAITNDHFKYALQHCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQYPVEHADKFKKFGMSASKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAKARGG 741          
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: A0A7S2V5J3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5J3_9STRA)

HSP 1 Score: 432 bits (1112), Expect = 6.130e-143
Identity = 220/287 (76.66%), Postives = 256/287 (89.20%), Query Frame = 1
Query:    1 QAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDVDSD-LDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGXXXXXXXSDVGDR 858
            +AGGE EKRIVS LLTLMD IKPTSHVVVIAATNRPN+IDPALRRFGRFDRELDIG+PD+ GRLEVL IKTR+MK+   +DL+ +A+ETHGFVGAD++QLCMEAAL C+ EKS E+D+D++ ++AEVL SL +TNDHF  AL   NPS+LRE  VEVPDVTW DIGGLE+VKRELQE++QYPVE+   + KFGMS SKGVLFYGPPGCGKTLLAKA+AN+CN+NFISVKGPELL+MWFGESEAN+R+LF+KARAA+PCILFFDEMDSIA+ RG XXXXXXXS+ GDR
Sbjct:  411 KAGGEVEKRIVSSLLTLMDSIKPTSHVVVIAATNRPNIIDPALRRFGRFDRELDIGVPDDDGRLEVLRIKTRNMKIDQSLDLEAIAKETHGFVGADLSQLCMEAALQCVREKSEEIDIDAESIEAEVLDSLCITNDHFRHALTVCNPSALRENYVEVPDVTWDDIGGLEEVKRELQELVQYPVEHADQFEKFGMSASKGVLFYGPPGCGKTLLAKAIANECNSNFISVKGPELLTMWFGESEANVRDLFDKARAAAPCILFFDEMDSIAKQRG-XXXXXXXSEAGDR 696          
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: A0A835YZ06_9STRA (Valosin-containing protein, isoform CRA_a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ06_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 4.540e-142
Identity = 208/273 (76.19%), Postives = 241/273 (88.28%), Query Frame = 1
Query:    1 QAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDVDSD-LDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRG 816
            +AGGE EKR+VSQLLTLMDGIKPTSHVVVI ATNRPN+IDPALRRFGRFDREL I  PDE+GRLE+L IKTR MKLA  +DL+Q+AR+THGFVGAD+AQLCMEAAL CI +K   +DVD+D +  E+L +L V+NDHF  +L+T NPS+LRET+VEVP+V+W D+GGLEDVKRELQE +QYPVE+   + KFGM PSKG LFYGPPGCGKTLLAKA+AN+C ANFISVKGPELLSMWFGESEAN+RELF+KARAA+PCILFFDEMDSIA+ RG
Sbjct:  421 KAGGELEKRVVSQLLTLMDGIKPTSHVVVIGATNRPNIIDPALRRFGRFDRELSIMQPDEEGRLEILRIKTRTMKLAEDVDLEQLARDTHGFVGADLAQLCMEAALYCIRQKMDVIDVDADTIPVEILDNLAVSNDHFRHSLQTCNPSALRETLVEVPNVSWKDVGGLEDVKRELQETVQYPVEHADKFKKFGMEPSKGTLFYGPPGCGKTLLAKAIANECGANFISVKGPELLSMWFGESEANVRELFDKARAAAPCILFFDEMDSIAKARG 693          
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: A0A7S3LYG9_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYG9_9STRA)

HSP 1 Score: 419 bits (1076), Expect = 9.800e-140
Identity = 209/287 (72.82%), Postives = 249/287 (86.76%), Query Frame = 1
Query:    1 QAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDVDSD-LDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGXXXXXXXSDVGDR 858
            +AGGE EKR+VSQLLTLMDGIKPTS+VVVIAATNRPN +DPALRRFGRFDRELDIG+PD  GRLEV+ IKTR+MKL   +DLK +A++THG+VGAD++QLCMEAA  CI E  H +D+D++ +DA VL SL+++  HF  AL  +NPS+LRE +VEVP+VTW D+GGLEDVKREL E +QYPVE+   + KFGM PSKGVLF+GPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESEANIR+LF+KARAA+PCILFFDEMDSIA+ RGGXXXXX  S+ GDR
Sbjct:  162 KAGGEVEKRLVSQLLTLMDGIKPTSNVVVIAATNRPNTLDPALRRFGRFDRELDIGVPDTDGRLEVMRIKTRNMKLDPDVDLKLIAKDTHGYVGADLSQLCMEAAFQCIRESMHNIDIDAESIDATVLDSLKISASHFKHALSVTNPSALRENIVEVPNVTWDDVGGLEDVKRELYETVQYPVEHADKFAKFGMQPSKGVLFFGPPGCGKTLLAKAIANECGANFISIKGPELLTMWFGESEANIRDLFDKARAAAPCILFFDEMDSIAKARGGXXXXX--SEAGDR 446          
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: A0A6N2KL55_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KL55_SALVM)

HSP 1 Score: 404 bits (1038), Expect = 2.580e-138
Identity = 194/266 (72.93%), Postives = 235/266 (88.35%), Query Frame = 1
Query:   10 GETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDVDSD-LDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIA 804
            GE E+RIVSQLLTLMDG+K  +HV+V+ ATNRPN IDPALRRFGRFDRE+DIG+PDE GR+EVL I T++MKLA  +DL++VA++THG+VGAD+A LC EAAL CI EK   +D+D D +DAEVL+S+ VTN+HF  AL TSNPS+LRET+VEVP+V+W DIGGLE+VKRELQE +QYPVE+   + KFGMSPSKGVLFYGPPGCGKTLLAKA+AN+C ANFISVKGPELL+MWFGESEAN+RE+F+KAR ++PC+LFFDE+DSIA
Sbjct:  106 GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRMEVLRIHTKNMKLAEEVDLEKVAKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDDTIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 371          
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: A0A7S3VU74_9SPIT (Hypothetical protein n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3VU74_9SPIT)

HSP 1 Score: 406 bits (1044), Expect = 6.170e-137
Identity = 196/270 (72.59%), Postives = 235/270 (87.04%), Query Frame = 1
Query:   10 GETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDVDSD-LDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRG 816
            GE E+RIVSQLLTLMDG+K  +HVVVI ATNRPN ID ALRRFGRFDRE+DIG+PDE GRLEVL I T++MKL+  +DL+Q+++ETHG+VGAD+A LC EAA+ CI EK   +D+D D +DAEVL S+ V+ +HF  AL TSNPS+LRET++EVP+VTW DIGGLE VKRELQE++QYPVE+   + KFGMSPSKGVLFYGPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESEAN+RELF+KAR A+PC+LFFDE+DSIAR RG
Sbjct:   55 GEVERRIVSQLLTLMDGLKARAHVVVIGATNRPNSIDAALRRFGRFDREVDIGVPDENGRLEVLRIHTKNMKLSDDVDLEQLSKETHGYVGADLAALCTEAAMQCIREKMDVIDLDDDEIDAEVLDSMAVSQEHFRLALGTSNPSALRETVIEVPNVTWDDIGGLEGVKRELQEVVQYPVEFPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARGAAPCVLFFDELDSIARARG 324          
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: W7TW67_9STRA (Transitional endoplasmic reticulum atpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW67_9STRA)

HSP 1 Score: 418 bits (1075), Expect = 8.240e-137
Identity = 206/287 (71.78%), Postives = 244/287 (85.02%), Query Frame = 1
Query:    1 QAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDVDSD-LDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGXXXXXXXSDVGDR 858
            +AGGE E+RIVSQ+LTL+DGIKP+S+VVV+AATNRPN IDPALRRFGRFDRELDIG+PD+ GRLEVL IKTR+MKL+  IDL  VA++THGFVGADI+QLCMEAAL CI EK  ++D+D + +DA++L SL + N+HF  A+   NPS+LRET VEVPDVTW D+GGLEDVKREL E IQYPVEY   + KFGM  ++GVLFYGPPGCGKTLLAKAVAN+C ANFIS+KGPELL+MWFGESEAN+R+LF+KARAA+PCILFFDEMDSIA+ RG        S+ GDR
Sbjct:  468 KAGGEVERRIVSQMLTLLDGIKPSSNVVVMAATNRPNQIDPALRRFGRFDRELDIGVPDDDGRLEVLKIKTRNMKLSPDIDLALVAKDTHGFVGADISQLCMEAALQCIREKMGDIDIDEEEIDAKILDSLMIDNEHFRHAMSVCNPSALRETQVEVPDVTWEDVGGLEDVKRELAETIQYPVEYAAKYEKFGMPAARGVLFYGPPGCGKTLLAKAVANECGANFISIKGPELLTMWFGESEANVRDLFDKARAAAPCILFFDEMDSIAKARGSGAGG---SEAGDR 751          
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: A0A446SCR3_TRITD (AAA domain-containing protein n=4 Tax=Triticeae TaxID=147389 RepID=A0A446SCR3_TRITD)

HSP 1 Score: 404 bits (1038), Expect = 2.340e-136
Identity = 193/273 (70.70%), Postives = 236/273 (86.45%), Query Frame = 1
Query:    1 QAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDV-DSDLDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRG 816
            +  GE E+RIVSQLLTLMDG+K  +HV+V+ ATNRPN IDPALRRFGRFDRE+DIG+PDE GRLEVL I T++MKLA  ++L+ ++R+THG+VGAD+A LC EAAL CI EK   +D+ D  +DAE+L+S+ VTNDHF  AL TSNPS+LRET+VEVP+V+W DIGGLE+VKRELQE +QYPVE+   + KFGMSPSKGVLFYGPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESEAN+RE+F+KAR ++PC+LFFDE+DSIA  RG
Sbjct:   30 KTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVELEHISRDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRG 302          
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Match: A0A7S0IYK9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IYK9_9EUKA)

HSP 1 Score: 405 bits (1041), Expect = 7.020e-136
Identity = 196/270 (72.59%), Postives = 235/270 (87.04%), Query Frame = 1
Query:   10 GETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFDRELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQLCMEAALACIAEKSHEVDVDSD-LDAEVLSSLEVTNDHFVKALETSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRG 816
            GE E+RIVSQLLTLMDGIK  +HVVVI ATNRPN ID ALRRFGRFDRE+DIG+PDE GRLEVL I T++MKL+  +DL+ +A+ETHG+VGADIAQLC EAA+ CI EK   +D+D D +DAE+L ++ V+ +HF  AL TSNPS+LRET+VEVP+V+W DIGGLE VKRELQE++QYPV +   + KFGMSPSKGVLFYGPPGCGKTLLAKA+AN+C+ANFIS+KGPELL+MWFGESEAN+RELF+KAR A+PC+LFFDE+DSIAR RG
Sbjct:  272 GEVERRIVSQLLTLMDGIKARAHVVVIGATNRPNSIDGALRRFGRFDREIDIGVPDENGRLEVLRIHTKNMKLSEDVDLEALAKETHGYVGADIAQLCTEAAMQCIREKMDVIDLDDDEIDAEILDAMAVSQEHFRTALGTSNPSALRETVVEVPNVSWEDIGGLEGVKRELQEVVQYPVNFPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECSANFISIKGPELLTMWFGESEANVRELFDKARGAAPCVLFFDELDSIARARG 541          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9048.19983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4L0_ECTSI1.010e-18496.85Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
D8LF27_ECTSI1.240e-14378.10Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2V5J3_9STRA6.130e-14376.66Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YZ06_9STRA4.540e-14276.19Valosin-containing protein, isoform CRA_a n=1 Tax=... [more]
A0A7S3LYG9_9STRA9.800e-14072.82Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A6N2KL55_SALVM2.580e-13872.93Uncharacterized protein n=1 Tax=Salix viminalis Ta... [more]
A0A7S3VU74_9SPIT6.170e-13772.59Hypothetical protein n=2 Tax=Choreotrichia TaxID=1... [more]
W7TW67_9STRA8.240e-13771.78Transitional endoplasmic reticulum atpase n=2 Tax=... [more]
A0A446SCR3_TRITD2.340e-13670.70AAA domain-containing protein n=4 Tax=Triticeae Ta... [more]
A0A7S0IYK9_9EUKA7.020e-13672.59Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9048contigS-firma_M_contig9048:79..4170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score545.8
Seed ortholog evalue1.2e-152
Seed eggNOG ortholog2880.D7G4L0
KEGG koko:K13525
KEGG TC3.A.16.1
KEGG Pathwayko04141,ko05134,map04141,map05134
KEGG ModuleM00400,M00403
EggNOG free text desc.ATP binding
EggNOG OGsCOG0464@1,KOG0730@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons7
Model size861
Cds size861
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828728.2812202-CDS-S-firma_M_contig9048:78..2541622828728.2812202-CDS-S-firma_M_contig9048:78..254Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 79..254 -
1697105126.2899005-CDS-S-firma_M_contig9048:78..2541697105126.2899005-CDS-S-firma_M_contig9048:78..254Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 79..254 -
1622828728.3039184-CDS-S-firma_M_contig9048:677..8341622828728.3039184-CDS-S-firma_M_contig9048:677..834Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 678..834 -
1697105126.3026545-CDS-S-firma_M_contig9048:677..8341697105126.3026545-CDS-S-firma_M_contig9048:677..834Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 678..834 -
1622828728.3246818-CDS-S-firma_M_contig9048:1893..19951622828728.3246818-CDS-S-firma_M_contig9048:1893..1995Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 1894..1995 -
1697105126.312151-CDS-S-firma_M_contig9048:1893..19951697105126.312151-CDS-S-firma_M_contig9048:1893..1995Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 1894..1995 -
1622828728.3442667-CDS-S-firma_M_contig9048:2498..25881622828728.3442667-CDS-S-firma_M_contig9048:2498..2588Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 2499..2588 -
1697105126.3288856-CDS-S-firma_M_contig9048:2498..25881697105126.3288856-CDS-S-firma_M_contig9048:2498..2588Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 2499..2588 -
1622828728.3583288-CDS-S-firma_M_contig9048:3022..31061622828728.3583288-CDS-S-firma_M_contig9048:3022..3106Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 3023..3106 -
1697105126.3398628-CDS-S-firma_M_contig9048:3022..31061697105126.3398628-CDS-S-firma_M_contig9048:3022..3106Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 3023..3106 -
1622828728.372169-CDS-S-firma_M_contig9048:3296..33531622828728.372169-CDS-S-firma_M_contig9048:3296..3353Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 3297..3353 -
1697105126.3530915-CDS-S-firma_M_contig9048:3296..33531697105126.3530915-CDS-S-firma_M_contig9048:3296..3353Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 3297..3353 -
1622828728.385852-CDS-S-firma_M_contig9048:3975..41701622828728.385852-CDS-S-firma_M_contig9048:3975..4170Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 3976..4170 -
1697105126.3610227-CDS-S-firma_M_contig9048:3975..41701697105126.3610227-CDS-S-firma_M_contig9048:3975..4170Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9048 3976..4170 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9048.19983.1prot_S-firma_M_contig9048.19983.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9048 79..4170 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9048.19983.1

>prot_S-firma_M_contig9048.19983.1 ID=prot_S-firma_M_contig9048.19983.1|Name=mRNA_S-firma_M_contig9048.19983.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=287bp
QAGGETEKRIVSQLLTLMDGIKPTSHVVVIAATNRPNVIDPALRRFGRFD
RELDIGIPDEQGRLEVLGIKTRDMKLAGGIDLKQVARETHGFVGADIAQL
CMEAALACIAEKSHEVDVDSDLDAEVLSSLEVTNDHFVKALETSNPSSLR
ETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVL
FYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNK
ARAASPCILFFDEMDSIARGRGGAGGGGGGSDVGDR*
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mRNA from alignment at S-firma_M_contig9048:79..4170-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9048.19983.1 ID=mRNA_S-firma_M_contig9048.19983.1|Name=mRNA_S-firma_M_contig9048.19983.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=4092bp|location=Sequence derived from alignment at S-firma_M_contig9048:79..4170- (Sphaerotrichia firma Sfir_13m male)
CAGGCCGGAGGAGAGACAGAGAAGCGCATCGTGTCCCAGCTGCTCACCCT GATGGACGGCATCAAGCCGACGTCGCACGTGGTGGTCATCGCGGCCACCA ACCGCCCGAACGTGATCGACCCGGCGCTCAGGCGCTTCGGCCGCTTCGAC CGAGAGCTGGACATCGGGATCCCCGATGAGCAAGGAAGGCTAGAGGTGAA GCATGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTTTTGCTGGAAACTCTT CAGCCTGACGTCGGCGGCAACCGGTTCCGTCCCGTGAAAACGTCGCTCCA GGGGGTTAAAGAAAAGGAACCGACTGCTGCTGTTGTTGTAGACGCCCTGC TGACCCTTCCCGCACCGTCGCAGACATACAGGCGTGAAAATAAATCGCAA CCCGTGGAGTTCGTTCGTTCGTTCGTTGGCCGTTCTTTGCTATGCGTGTG TTAGCTTGGGTAGGCGGTGGTGTGGGGGTCCCGCCGATGTGGGCTGATAT CAGAGAGTCGGGCGCCTGGAGTCGTAGGATAATATTGAGCGTTTGAAGTC TTCTGGCACCGCACCCGGAGAGCGTGCGTGGCCGCCGCTTTCAGATGCCT CTTGGGAAAAGGAGGAAGGAAGCATGTTGTGGTGCCCTGTCGATGCTGTC CGTGCCGCTGTTTCGCGTGGTGCGTGCGTCGGACAGCACCCCACTCGTGG GCATGATGTGGGCGCCACCCGTTCGTTTTGGCAGTTACTTGCTCTTGGCC ATGTCAAGCTCCCTCACCCCCTGCGTCGTCGCGTGGCTATGTAACATGCA ACGCTTTTCGAATGTAGGTGCTTGGCATCAAGACTCGGGACATGAAGCTG GCTGGAGGCATCGACCTTAAGCAGGTGATTGTGTGGGCGCAGTTTGGGCA GCCAGTCCCAAAACAAATAGTTGTCTTTACCATGGCATGAAGGGTGTGAC TCTGTCTCCACATGGGCGGGGACCGTTGCTGACCTTTTTTTCCTTTTTTT TTTGACGAGTTTGCGCTGCCGCCCTGCTGCCGCCGCCGCCGCCGCTGCTG CTGGACCGTGATAGGTGGCGCGAGAAACCCACGGCTTTGTCGGGGCAGAC ATTGCTCAGCTGTGCATGGAAGCCGCCTTGGCTTGTATCGCGGAGAAGGT GAGTTGAGCTCGAGCGAACTGTAGCGAGTTGAATCTTCGGGGGTATGCTT GCCTGTGATCTGGTGTCGCGGTCGACTTGAACGGGGTCAGCGAAAGACCG TCTCATCTGAAGCTAGTGATGCTCGTAACTTCTGCATCAATGGAACAACG GGCACACACCGGGCACGCATACGCCTGTCCGCCTAAAATAGACTGCACGT GCGCGATACGGCGCCGCCTCCTCCACACGCCTCTCGCTCACCCTGGCAAA TGGTGTACCGGAAACATTCCACATGTTTCGGAGACACGGATTCTTCCCGC GTGCAATCGTCTACCGGTTTGTTATGAAGCCGGCGTACGGTATCACGCCT GTTCACAACGTGCTTTCCGTCTCTCTGCCACCCCACCAACAAAACAACCG GCGAATTCGTACACCAAACGTGGCCGCAAAAGTCCCACGAGGTGGACGTG GACTCCGATCTGGACGCGGAGGTGCTCTCGAGCCTCGAGGTCACCAACGA CCACTTCGTCAAGGCTCTAGAGGTGGGTGGGTGCGCGAGCGCGTGGGTGG GTGTCTTGTGGGCTTTCTTGGCTTGCATCGCCCGCGCTAACCGGTTGACC AATAAAAAGACTTCAGACGTAGCGGAGGAGGGGCGCTAAATGGAAACGCT TTCTTAAGTGTTGGGACTCCTTGCTAAGGGTCCCGCAAAAGAATCCCGAC AGAACTCCAGAGGTTCGTCGTTGCCTAAAGGCGCAGGTTGCGCGGTGCGT GTTTGTGTGTGCTTGTCTGACTCCGCAAGTACCAGCTTTTTTGGTGGCGC GTGTGCTTACTCAGCAGTAGTCGCTTCTCTTTCCTCTTTTCTCGCTTGTT GCGGTGGGCTTTGCTGTCTTGACCCTCGGCTTGTTTGTTGCAGTGAACGA ACCGTGGTGTTTTTTCTGTCTCTCTTCCTCTGTTACTCCGCTTTTGTTTC CCCTCTCGACTGTCACTGCTGTCTTGCGTTTTTTCGTGGTATGGACTCTC CGTGGCCCCGTCCTTGGCATGGCAGACCAGCAACCCATCCTCCCTGCGAG AGACGATGGTGGAGGTACCGGACGTCACGTGGGCGGACATCGGCGGACTC GAAGACGTGAAGCGGGAGTTGCAGGAGGTGAGGCGTGAGGTAAAAGGCAC ATACAGTAAATGCTGGCGAGTAGTCTACGCTGAGGCGCGTTGTTCGTCGG CTGGCAAAAGGCTATGATACTACTGTGGCGTGGAGTTGTATGGTGTGCTT TCTCGTGCTTCGGACGTTGCCGATGGCTCGTTCAGCTGGAGTTGGCGACG GTGGGCGGGAAGAGATACGGACGAATTCGCACGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTATGTTTTCGTCCCGTTTGTTCGGGCGTCTG TACGCCTCTTCGGTGTTGTACACCTTTCAGCGCAGTTCACTATACACACT TTTTTCAGTGCATGTTGTCGGTACAACCAGACGTATCCTGGGAGGGGGGG CAAACACGAAACCTTCTTTCTTGTTTTTGTTCTTCTATTTTTGCCCCACC TTTCCTCCTGCGGTGCTTGCCTCAATTTGTTTCGCCAGAAGGGCTCAGCC GTCCCTTTCCCTCGTCAACGGTGCTGTTGTCCAAGTTTGGTACTCGCAAG CTTTCAGCTCTTTTTTCGCTTTCGTCCGCAAAATTTTGCAAGTGTTTTGC CCCATGGGGATTACAACTCACGACTCTGTCGCTAGCTGGTTTCGAGGTTA CCACTAGACCACCTTGGCGACCGTAGCGACGGTTTATGCAACTAGCGTGC CGACCGTGCACGGATTTTCCCGCTGTTTTCGTGGTTAGCCTACAACAACG ACATGAAGCGGGAGCTGTGAAAAGGTTGGCTGACTTTCATCTACCCGAGA TAGGCCTGCGTGTGTTCGGCTCTTCCAGCGCCTGTTTTTCTCTTTCGCCC CCGTCTGTTGTATTGACCGTTTCCCGATTGAGTCAGAACCGGCGTCCTTC AGTGCGCCGAAACTGGAAGCATAAAAGAGCTTGCTCTACGAGTTTTTCCC ACAAGGGTGGTCGAGGCTTTCGTGTACAATCCAAAATCTTGGTCCTAGTC TGCTCCAGTGCTGCTTTGGACGTTTTGTTTTTCCTTCTTGTTTCTTTTCG GGTTGCGTGCGGACTCGATTTATTTGTCGATCGCAGATGATACAGTACCC CGTGGAGTACGGCCCGCTTTGGCACAAGTTCGGCATGTCCCCTTCGAAGG GGGTTCTGTTTTACGGCCCCCCTGGCTGCGGAAAGACGCTGCTCGCCAAG GCGGTGGCGAACCAGTGCAACGCTAACTTTATCTCCGTCAAAGGTGGGAC AGACTTGTGGGTGGTGGTGGTGGTGGTGATGGTGATGCCACAGTAGGTGT TCCTGTGGGTGCTGTTGGTGTATTTTTCTATTCCTCGTTGCAATGCTTTG TGTTCCGACTCGATCTCTTGTGTTCGATTCCGTTCTTGCCCAAGTCGAAT GACCAGTCCACCGCCATCCCACTATCATTCTCATTCTAAACTGAAACTGT AACTGTAGCTGTAACTGTAGCTGTAGCTGTAGCTGTAGCTGTAGCTGTAG CTGTCACTACCGGGCCGAAACCCAGACGTGTTTTCGAAGGACACAAGGAC CTAGACGAGGTGCTCCCGCGTCTTGTTTCATCCTCGGTGTCAGCAGTCCC CTGAACGCAGCAGCGAACGCCTTGCACGCGCGCCACCTTTGGCCGTTACT GTTTTTTTTTCGTCAGGGCCCGAGCTCTTGTCTATGTGGTTCGGAGAGAG CGAGGCGAACATCCGCGAGCTGTTCAACAAGGCCCGGGCCGCGTCTCCTT GCATCTTGTTCTTCGACGAGATGGACTCTATCGCCAGGGGGCGAGGGGGC GCGGGGGGGGGGGGGGGTGGCAGCGACGTCGGGGACAGGTGA
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Coding sequence (CDS) from alignment at S-firma_M_contig9048:79..4170-

>mRNA_S-firma_M_contig9048.19983.1 ID=mRNA_S-firma_M_contig9048.19983.1|Name=mRNA_S-firma_M_contig9048.19983.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1722bp|location=Sequence derived from alignment at S-firma_M_contig9048:79..4170- (Sphaerotrichia firma Sfir_13m male)
CAGGCCGGAGGAGAGACAGAGAAGCGCATCGTGTCCCAGCTGCTCACCCT
GATGGACGGCATCAAGCCGACGTCGCACGTGGTGGTCATCGCGGCCACCA
ACCGCCCGAACGTGATCGACCCGGCGCTCAGGCGCTTCGGCCGCTTCGAC
CGAGAGCTGGACATCGGGATCCCCGATGAGCAAGGAAGGCTAGAGCAGGC
CGGAGGAGAGACAGAGAAGCGCATCGTGTCCCAGCTGCTCACCCTGATGG
ACGGCATCAAGCCGACGTCGCACGTGGTGGTCATCGCGGCCACCAACCGC
CCGAACGTGATCGACCCGGCGCTCAGGCGCTTCGGCCGCTTCGACCGAGA
GCTGGACATCGGGATCCCCGATGAGCAAGGAAGGCTAGAGGTGCTTGGCA
TCAAGACTCGGGACATGAAGCTGGCTGGAGGCATCGACCTTAAGCAGGTG
CTTGGCATCAAGACTCGGGACATGAAGCTGGCTGGAGGCATCGACCTTAA
GCAGGTGGCGCGAGAAACCCACGGCTTTGTCGGGGCAGACATTGCTCAGC
TGTGCATGGAAGCCGCCTTGGCTTGTATCGCGGAGAAGGTGGCGCGAGAA
ACCCACGGCTTTGTCGGGGCAGACATTGCTCAGCTGTGCATGGAAGCCGC
CTTGGCTTGTATCGCGGAGAAGTCCCACGAGGTGGACGTGGACTCCGATC
TGGACGCGGAGGTGCTCTCGAGCCTCGAGGTCACCAACGACCACTTCGTC
AAGGCTCTAGAGTCCCACGAGGTGGACGTGGACTCCGATCTGGACGCGGA
GGTGCTCTCGAGCCTCGAGGTCACCAACGACCACTTCGTCAAGGCTCTAG
AGACCAGCAACCCATCCTCCCTGCGAGAGACGATGGTGGAGGTACCGGAC
GTCACGTGGGCGGACATCGGCGGACTCGAAGACGTGAAGCGGGAGTTGCA
GGAGACCAGCAACCCATCCTCCCTGCGAGAGACGATGGTGGAGGTACCGG
ACGTCACGTGGGCGGACATCGGCGGACTCGAAGACGTGAAGCGGGAGTTG
CAGGAGATGATACAGTACCCCGTGGAGTACGGCCCGCTTTGGCACAAGTT
CGGCATGTCCCCTTCGAAGGGGGTTCTGTTTTACGGCCCCCCTGGCTGCG
GAAAGACGCTGCTCGCCAAGGCGGTGGCGAACCAGTGCAACGCTAACTTT
ATCTCCGTCAAAGATGATACAGTACCCCGTGGAGTACGGCCCGCTTTGGC
ACAAGTTCGGCATGTCCCCTTCGAAGGGGGTTCTGTTTTACGGCCCCCCT
GGCTGCGGAAAGACGCTGCTCGCCAAGGCGGTGGCGAACCAGTGCAACGC
TAACTTTATCTCCGTCAAAGGGCCCGAGCTCTTGTCTATGTGGTTCGGAG
AGAGCGAGGCGAACATCCGCGAGCTGTTCAACAAGGCCCGGGCCGCGTCT
CCTTGCATCTTGTTCTTCGACGAGATGGACTCTATCGCCAGGGGGCGAGG
GGGCGCGGGGGGGGGGGGGGGTGGCAGCGACGTCGGGGACAGGTGAGGCC
CGAGCTCTTGTCTATGTGGTTCGGAGAGAGCGAGGCGAACATCCGCGAGC
TGTTCAACAAGGCCCGGGCCGCGTCTCCTTGCATCTTGTTCTTCGACGAG
ATGGACTCTATCGCCAGGGGGCGAGGGGGCGCGGGGGGGGGGGGGGGTGG
CAGCGACGTCGGGGACAGGTGA
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