mRNA_S-firma_M_contig9042.19979.1 (mRNA) Sphaerotrichia firma Sfir_13m male
|
Overview
Homology
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: D8LCA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA3_ECTSI) HSP 1 Score: 662 bits (1707), Expect = 1.500e-230 Identity = 417/625 (66.72%), Postives = 459/625 (73.44%), Query Frame = 1
Query: 1 DYMLAYSLRKHAGVRSYVLPMDLYDSETWGNVDVEWNMQHQGGGATTLRTTVPMRDRIWHRLLKRGGDYFMSLRYAARPRPIVLVVDGAFDARALRALFLELQASYPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVVLTGRGGTATSCSLAASTLGNRPGGEGEGAGRGPALCDPDSFASAWNLVAARHFPRLGTGRGGGSGGRDPVLMADLAAGLAGAVGTLKPLAVVSVAGTGPAAGAADGVGGGGAAIDEALAVVAGQAGVPLIRLPRKKDASAAALWLARLTPKAFRAWHRPRVDIVVVYEPS----GXXXXXXXXAGHTEAQLGALLGGLSEAHYLGDSVGLTVVIGSGPVPGAVGDEELYWPRGRKVVRGGSLSPSSPRNGXXXXXXXXXXXXXXXXXXXXXPSSLAALALRSWVPR---DDDSLVLVLEADQLVSPLFYSWLKAAVLETGYGGAAAPRPSASAPRPPS---GAQGSVCLPGVEASGXXXXXXXXXXAWLLPAGEWRAAQARCLGNAPPLAAXXXXXXXXXXACGGVGFGVPPTG---PS---LCPSLKRPDEALVGRTDADGALLGRGGGAPGLLEDGDALAKFVGRVLF 1827
DYMLAYSLRKHAGVRS+VLPMDL DSETWGNVDV+WNMQHQGG ATTLR+TVPMRDRIWHRL KRGG+YFMSLRYA+RPRP++LVVDGAFDA+ALRALFL LQ SYPPTXXXXXXXXXXXXXXXXXXXXXX RVVLTGRGG + SCSLAA LGN +G + G LCDPD+FASAWNLVA RHFPR GT RGGGSGGRD VLM DLA GLAGAV T+KPLA+VSVAGTGP+AG GVGGGGAAIDEA+AVVAGQAGVP++RLPR+ ASAAALWL+RLTPKAFRAWHRPRVDIVVVYEPS GXXXXXXXX HTEAQL ALL +SEAHYLGDSVG+T+ + SGPVP +VGDE WPRGRK VRGGSL PS P + +S A LALRSW+PR +DDS V+VLEAD++VSPLFYSWLK AVLET YGGAAAP+PSAS RP + G++G VC+PG +A G WL+PAG WRAAQARCL N GG G G TG PS LCP + P EALVGRT ADGALL G GL+E+GDALA FV RVLF
Sbjct: 69 DYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVDWNMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRPLLLVVDGAFDAQALRALFLVLQDSYPPTXXXXXXXXXXXXXXXXXXXXXXGVGVPQRPP------------RVVLTGRGGGSASCSLAARDLGNTK--DGRVSRGGATLCDPDTFASAWNLVAGRHFPRQGTSRGGGSGGRDHVLMVDLALGLAGAVSTVKPLAIVSVAGTGPSAGTPGGVGGGGAAIDEAVAVVAGQAGVPVVRLPRRASASAAALWLSRLTPKAFRAWHRPRVDIVVVYEPSPTNGGXXXXXXXXXXHTEAQLEALLNSISEAHYLGDSVGVTIAVASGPVPDSVGDESFPWPRGRKTVRGGSLFPSKPAD------------------LVGGSASPATLALRSWMPRGDDEDDSFVVVLEADRVVSPLFYSWLKVAVLETSYGGAAAPKPSASDRRPAAAAAGSRGGVCVPG-DAGGEAGGG-----TWLMPAGHWRAAQARCLRN----------KDGFEGGGGGPGTGCESTGYPQPSERVLCPIVTEPGEALVGRTGADGALLD--GWPRGLMENGDALASFVERVLF 643
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: A0A6H5KK73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK73_9PHAE) HSP 1 Score: 637 bits (1642), Expect = 1.020e-217 Identity = 414/633 (65.40%), Postives = 456/633 (72.04%), Query Frame = 1
Query: 1 DYMLAYSLRKHAGVRSYVLPMDLYDSETWGNVDVEWNMQHQGGGATTLRTTVPMRDRIWHRLLKRGGDYFMSLRYAARPRPIVLVVDGAFDARALRALFLELQASYPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVVLTGRGGTATSCSLAASTLGNRPGGEGEGAGRGPALCDPDSFASAWNLVAARHFPRLGTGRGGGSGGRDPVLMADLAAGLAGAVGTLKPLAVVSVAGTGPAAGAADGVGGGGAAIDEALAVVAGQAGVPLIRLPRKKDASAAALWLARLTPKAFRAWHRPRVDIVVVYEPSGXXXXXXXXAG--------HTEAQLGALLGGLSEAHYLGDSVGLTVVIGSGPVPGAVGDEELYWPRGRKVVRGGSLSPSSPRNGXXXXXXXXXXXXXXXXXXXXXPSSLAALALRSWVPRDD---DSLVLVLEADQLVSPLFYSWLKAAVLETGYGGAAAPRPSASAPRPPS--GAQGSVCLPGVEASGXXXXXXXXXXAWLLPAGEWRAAQARCLGNAPPLAAXXXXXXXXXXACGGVGFGVPPTG--------PS---LCPSLKRPDEALVGRTDADGALLGRGGGAPGLLEDGDALAKFVGRVLF 1827
DYMLAYSLRKHAGVRS+VLPMDL DSETWGNVDV W MQHQGG ATTLR+TVPMRDRIWHRL KRGG+YFMSLRYA+RPRP++LVVDGAFDA+ALRALFL LQ SYPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX RVVLTGRGG + SCSLAA LGN +G +G G LCDPD+FASAWNLVA RHFPR GT R GGSGGRD VLM DLA GLAGAV T+KPLA+VSVAGTGP+AG GVGGGGAAIDEA+AVVAGQAGVP++RLPR+ ASAAALWL+RLTPKAFRAWHRP+VDIVVVYE XXXXXXXX HTEAQL ALL +SEAHYLGDSVG+T+ + SGPVP +VGDE WPRGRK VRGGSL PS P + +S A LALRSW+PR D DS V+VLEAD++VSPLFYSWLK AVLET YGGAAAP+ S S +P + G++G VC+PG +A G WL+PAG WRAAQARCL N G G G P TG PS LCP + P EALVGRT ADGALL G L+E+GDALA FV RVLF
Sbjct: 265 DYMLAYSLRKHAGVRSFVLPMDLGDSETWGNVDVNWKMQHQGGEATTLRSTVPMRDRIWHRLFKRGGEYFMSLRYASRPRPLLLVVDGAFDAQALRALFLVLQDSYPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGVGVPQRPP----RVVLTGRGGGSASCSLAARDLGNSK--DGRASGGGATLCDPDTFASAWNLVAGRHFPRQGTSRSGGSGGRDHVLMVDLALGLAGAVSTVKPLAIVSVAGTGPSAGTPGGVGGGGAAIDEAVAVVAGQAGVPVVRLPRRASASAAALWLSRLTPKAFRAWHRPQVDIVVVYEXXXXXXXXXXXXXXXXXXXXXHTEAQLEALLNSISEAHYLGDSVGMTIAVASGPVPDSVGDESFPWPRGRKTVRGGSLFPSKPAD------------------LVGGSASPATLALRSWMPRGDKEEDSFVVVLEADRVVSPLFYSWLKVAVLETSYGGAAAPKRSVSDRQPAAAAGSRGGVCVPG-DARGKAGGG-----TWLMPAGHWRAAQARCLRNKDGFE--------------GGGGGRPGTGCESTIYPQPSERVLCPIVTEPGEALVGRTGADGALLD--GWPKDLMENGDALASFVERVLF 851
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: A0A7S2Y3B8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3B8_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 4.270e-14 Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 1 DYMLAYSLRKHAGVRSYVLPMDLYDSETWGNVDVEWNMQHQGGGATTLRTTVPMRDRIWHRLLKRGGDY-FMSLRYAARP-------RPIVLVVDGAFDARALRALFLELQA 312
DY LAYSLR++A SY++PMDL D TWGNVD+ G ATT T + +R+ +WH L+ RGG Y F+ R R +++V+DGA A+A+ L + L A
Sbjct: 301 DYFLAYSLRRYANAPSYIMPMDLEDPATWGNVDIVNGFA--SGNATTTGTMIDVRNDLWHGLVARGGKYQFLLQRQKLREGDQGDGRTSVLVVIDGAGQAKAMDKLMMALNA 410
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: A0A7S3XR94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR94_HETAK) HSP 1 Score: 85.9 bits (211), Expect = 5.400e-14 Identity = 46/84 (54.76%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 1 DYMLAYSLRKHAGVRSYVLPMDLYDSETWGNVDVEWNMQHQGGGATTLRTTVPMRDRIWHRLLKRGGDYFMSLRYAARPRPIVL 252
DY LAYS+RK A + SYVLPMDL DS TWGNVD++ +Q ATT V +R +W RL +RGGDYF R RPRP V+
Sbjct: 220 DYHLAYSMRKFADLPSYVLPMDLTDSRTWGNVDLQQTLQ--AVAATTTMDMVHVRMALWRRLAQRGGDYFWLRR---RPRPPVI 298
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: K5UK67_PHACS (Uncharacterized protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5UK67_PHACS) HSP 1 Score: 67.4 bits (163), Expect = 5.950e-8 Identity = 51/181 (28.18%), Postives = 75/181 (41.44%), Query Frame = 1
Query: 895 WLARLTPKAFRAWHRPRVDIVVVYEPSGXXXXXXXXAGHTEAQLGALLGGLSEAHYLGDSVGLTVVIGSGPVPGAVG-DEELYWPRG-----RKVVRGGSLSPSSPRNGXXXXXXXXXXXXXXXXXXXXXPSSLAALALRSWVPRDDDSLVLVLEADQLVSPLFYSWLKAAVLETGYGGAA 1419
W+ L + +R W +P+++I V+ + A L LL LS AH+ GD+V L + + P + E WP G R+V+ GG L + SW P+ +DS L+LE D +SPLFY+W+K A+L YGG A
Sbjct: 463 WMGSLAAEEWRNWRKPQLEISVITDDR-------------PASLTRLLASLSAAHFFGDTVALRINVEQTAGPQTLRLVHEFEWPHGPVFVHRRVIHGGLLPA----------------------------------VVESWYPQSEDSYGLILEDDVELSPLFYAWIKMALLHYRYGGPA 596
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: A0A0D2L8T6_HYPSF (Uncharacterized protein n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2L8T6_HYPSF) HSP 1 Score: 66.2 bits (160), Expect = 1.360e-7 Identity = 58/198 (29.29%), Postives = 82/198 (41.41%), Query Frame = 1
Query: 841 GVPLIRLPRKKDASAAALWLARLTPKAFRAWHRPRVDIVVVYEPSGXXXXXXXXAGHTEAQLGALLGGLSEAHYLGDSVGLTVVIGSGPVPGAVGDE-ELYWPRG-----RKVVRGGSLSPSSPRNGXXXXXXXXXXXXXXXXXXXXXPSSLAALALRSWVPRDDDSLVLVLEADQLVSPLFYSWLKAAVLETGYGGA 1416
G IR+PR ++ W++ L+ K ++ WHRPR+DI ++ + A L LL L A Y GD + L V + ++ + WP G +VV GG L + SW PRD+DS L+LE D VSPL+Y+WLK A+L YG A
Sbjct: 453 GATHIRIPRLDLSNTE--WMSALSVKEWQNWHRPRIDISIITKDR-------------PAALTRLLHSLQAARYFGDPLDLRVNVEQDCAAESLRIAGNITWPFGSVFIHHRVVHGGLLPA----------------------------------VVESWYPRDNDSYGLLLEDDIEVSPLYYAWLKMAILRYRYGSA 601
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: A0A4Q2DCM9_9AGAR (Uncharacterized protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DCM9_9AGAR) HSP 1 Score: 65.1 bits (157), Expect = 3.090e-7 Identity = 50/177 (28.25%), Postives = 74/177 (41.81%), Query Frame = 1
Query: 895 WLARLTPKAFRAWHRPRVDIVVVYEPSGXXXXXXXXAGHTEAQLGALLGGLSEAHYLGDSVGLTVVIGSGPVPGAVGDEELY-WPRG-----RKVVRGGSLSPSSPRNGXXXXXXXXXXXXXXXXXXXXXPSSLAALALRSWVPRDDDSLVLVLEADQLVSPLFYSWLKAAVLETGY 1407
W+A LT + ++ WH+PR+DI V+ L LLG LS A Y GDS+ L + + + + Y WP G ++V GG L + SW PR++D+ L+LE D +SPLFY+W+K A+L+ Y
Sbjct: 439 WMASLTLQQWKNWHKPRIDISVITRDRPN-------------SLARLLGSLSAARYFGDSIDLRLNVEQDCDFETLKISQTYSWPHGSFFLHHRIVHGGLLPA----------------------------------IVESWYPRNNDTYGLLLEDDVELSPLFYAWVKMAILKYRY 568
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: A0A1X6N6S1_9APHY (Uncharacterized protein n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6N6S1_9APHY) HSP 1 Score: 60.8 bits (146), Expect = 6.170e-6 Identity = 50/178 (28.09%), Postives = 70/178 (39.33%), Query Frame = 1
Query: 895 WLARLTPKAFRAWHRPRVDIVVVYEPSGXXXXXXXXAGHTEAQLGALLGGLSEAHYLGDSVGLTVVIG-SGPVPGAVGDEELYWPRGR-----KVVRGGSLSPSSPRNGXXXXXXXXXXXXXXXXXXXXXPSSLAALALRSWVPRDDDSLVLVLEADQLVSPLFYSWLKAAVLETGYG 1410
W+ LT + +++WH P VDI V+ L LL LS A Y GDS+ L V I + + + W GR +V+ GG L+ + SW PR + S L+LE D +SPLFY+W+K A+L YG
Sbjct: 385 WMGSLTLQEYKSWHLPHVDISVI-------------TNDRPRSLSRLLASLSTARYFGDSIDLRVNIEQTADLETLKMVDAFEWTHGRMFLHRRVIHGGLLTA----------------------------------VVESWYPRSNHSYGLILEDDVELSPLFYAWVKLALLRYRYG 515
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: A0A4Y9Z1X4_9APHY (Uncharacterized protein n=2 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9Z1X4_9APHY) HSP 1 Score: 59.3 bits (142), Expect = 1.930e-5 Identity = 47/176 (26.70%), Postives = 70/176 (39.77%), Query Frame = 1
Query: 895 WLARLTPKAFRAWHRPRVDIVVVYEPSGXXXXXXXXAGHTEAQLGALLGGLSEAHYLGDSVGLTVVIG-SGPVPGAVGDEELYWPRGR-----KVVRGGSLSPSSPRNGXXXXXXXXXXXXXXXXXXXXXPSSLAALALRSWVPRDDDSLVLVLEADQLVSPLFYSWLKAAVLETG 1404
W+ LT + FR WH+P+V + V+ L LL LS AHY GD++ L V + + + ++ W GR +++ GG L + SW P+ +DS L+LE D +SPLFY W+K A+L G
Sbjct: 462 WIGALTLEEFRNWHKPQVAVSVI-------------TNDRPHSLSRLLDSLSRAHYFGDALDLRVNLEQTADMETQQIVDDFAWNHGRVFLHRRIIHGGLLPA----------------------------------VVESWYPQSNDSYGLILEDDVELSPLFYGWIKLALLRYG 590
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Match: A0A5C5FYK6_9BASI (Glycosyltransferase 2 n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5FYK6_9BASI) HSP 1 Score: 58.5 bits (140), Expect = 3.830e-5 Identity = 50/180 (27.78%), Postives = 67/180 (37.22%), Query Frame = 1
Query: 889 ALWLARLTPKAFRAWHRPRVDIVVVYEPSGXXXXXXXXAGHTEAQLGALLGGLSEAHYLGDSVGLTVVIGSGPVPGAVGD-------EELYWPRGRKVVRGGSLSPSSPRNGXXXXXXXXXXXXXXXXXXXXXPSSLAALALRSWVPRDDDSLVLVLEADQLVSPLFYSWLKAAVLETGY 1407
A W+ L +A R WH PR+D+ VV L LL L AHY GD V L+V + D +++ WP G +R L L + SW P +D+ ++LE D VSPLFY WLK A+L+ Y
Sbjct: 805 AEWVGALDLEALRHWHTPRIDLSVV-------------TNDRPVSLHRLLSSLQTAHYYGDDVSLSVNLEQ------TADRLTHRLVDDMRWPHGAFSLRHRILL-----------------------------GGLMPAIVESWYPTSNDTYGVLLEDDVEVSPLFYGWLKFAILQYRY 936 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9042.19979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9042.19979.1 >prot_S-firma_M_contig9042.19979.1 ID=prot_S-firma_M_contig9042.19979.1|Name=mRNA_S-firma_M_contig9042.19979.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=609bp MLAYSLRKHAGVRSYVLPMDLYDSETWGNVDVEWNMQHQGGGATTLRTTVback to top mRNA from alignment at S-firma_M_contig9042:2014..4255+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9042.19979.1 ID=mRNA_S-firma_M_contig9042.19979.1|Name=mRNA_S-firma_M_contig9042.19979.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2242bp|location=Sequence derived from alignment at S-firma_M_contig9042:2014..4255+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9042:2014..4255+ >mRNA_S-firma_M_contig9042.19979.1 ID=mRNA_S-firma_M_contig9042.19979.1|Name=mRNA_S-firma_M_contig9042.19979.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=3654bp|location=Sequence derived from alignment at S-firma_M_contig9042:2014..4255+ (Sphaerotrichia firma Sfir_13m male)back to top |