mRNA_S-firma_M_contig903.19968.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig903.19968.1
Unique NamemRNA_S-firma_M_contig903.19968.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: D7G2J2_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J2_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 2.650e-123
Identity = 239/328 (72.87%), Postives = 251/328 (76.52%), Query Frame = 1
Query:   31 MFRRKSNKPEAKKKRAWEVDVEADDNDDAGDETTATPSEAFLSLQKDLEEKEKIQKXXXXXXXXXXXXXXXXXXSLRRKEEVRKANAKNPRVFLDIEIADDTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRVV--PKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQIPDEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGKKRPRVRFAKTDGDAASNG 1008
            MFRRK NKPEAKKKRAWEVDVEADD D+ GD+TT  PSEAFLSLQ++LEEKEKIQ+                  SLRRKEEVRKAN KNPRVFLDIEIAD TGAKSRL KGK  GR+TLELFENAVPRTAENFRALCTGEK  G      ++ G      V  P               GGESIYGPTF DESF LKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVR IEDCGTTSGEPTKRVQIAECGQIPDE++  XXXXXXXXXXXXXXXXXXXXXXXXX         RPRVRFAK+D DA  +G
Sbjct:    1 MFRRKPNKPEAKKKRAWEVDVEADDKDE-GDDTT--PSEAFLSLQRELEEKEKIQQENAERAKNQDALAAEAANSLRRKEEVRKANTKNPRVFLDIEIADTTGAKSRLAKGKNAGRVTLELFENAVPRTAENFRALCTGEKV-GRERESDTWCGATSRTEVKPPDLNLTAYPPCPRCSCGGESIYGPTFVDESFQLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQIPDEEKDKXXXXXXXXXXXXXXXXXXXXXXXXX---------RPRVRFAKSD-DAGGDG 314          
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: A0A7S2V5N2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5N2_9STRA)

HSP 1 Score: 235 bits (600), Expect = 8.530e-71
Identity = 131/271 (48.34%), Postives = 164/271 (60.52%), Query Frame = 1
Query:   40 RKSNKPEAKKKRAWEVDVEADDNDDAGDETTATPSEAFLSLQKDLEEKEKIQKXXXXXXXXXXXXXXXXXXSLRRKEEVRKANAKNPRVFLDIEIAD-----DTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPR-GSSGFPLSYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 834
            +K  K + K+K  W+ + E     D   E  A PSEAF+ LQKDLEEKE+I+K                  S    E  +  +  NP VF+D+ + +     D     R  + ++ GR+  EL     PRTAENFR LCTGEK R      PL YLGNIFHR++P FMAQGGDIT EDG+GGESIYG  F DE+FLLKH   G LSMANSG  SN+SQFF+T GP   LD KHVVFG+++EG + +R+IE  GT SGE  K+V I  CG++
Sbjct:   12 KKDQKQKLKRKPKWQQEQE-----DNSSEEEAVPSEAFMKLQKDLEEKERIKKENRVSKRGDIKKE-----SHNELEPAQHESGPNPVVFMDVSVREKGVSYDQNGIPRKQQEQQRGRLVFELLSAVAPRTAENFRCLCTGEKGRIPGKSLPLHYLGNIFHRIIPGFMAQGGDITHEDGTGGESIYGGKFRDENFLLKHHSAGQLSMANSGPHSNSSQFFLTLGPARHLDGKHVVFGQMLEGEDFLRIIESAGTKSGETIKQVTIDGCGEL 272          
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: A0A455B6L4_PHYMC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physeter macrocephalus TaxID=9755 RepID=A0A455B6L4_PHYMC)

HSP 1 Score: 227 bits (578), Expect = 2.310e-69
Identity = 115/182 (63.19%), Postives = 132/182 (72.53%), Query Frame = 1
Query:  289 AKNPRVFLDIEIADDTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 834
            AKNP+VF DI I            GK  GRI  ELF+N VPRTAENFRALCTGEK RG SG PLSY G  FHR++P+FM QGGD T  +G+GGESIYG  FADE+F LKH +P LLSMANSG ++N SQFFIT  P PWLD KHVVFGKVVEG +VV+ +E  GT SG   + V IA+CGQ+
Sbjct:    2 AKNPQVFFDITIG-----------GKPAGRIVFELFKNIVPRTAENFRALCTGEKGRGVSGKPLSYKGCSFHRIIPEFMCQGGDFTNFNGTGGESIYGMKFADENFELKHTEPFLLSMANSGPNTNGSQFFITTVPCPWLDGKHVVFGKVVEGTDVVKQMEQQGTRSGTVKQPVVIADCGQL 172          
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: A0A388MFL0_CHABU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MFL0_CHABU)

HSP 1 Score: 226 bits (576), Expect = 4.460e-69
Identity = 109/180 (60.56%), Postives = 132/180 (73.33%), Query Frame = 1
Query:  295 NPRVFLDIEIADDTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 834
            NP VF DI I            G+KVGRI +EL++N VPRTAENFRALCTGEK  G SG PL Y G  FHRV+PKFM QGGD TR DG+GGESIYG  FADE+F  KH +PG+LSMAN+G ++N SQFF+   P PWLD KHVVFGKV++GM+VV  +E  G++SG  ++ V IA+CGQ+
Sbjct:    3 NPTVFFDITIG-----------GRKVGRIVMELYKNVVPRTAENFRALCTGEKGTGRSGRPLHYKGCTFHRVIPKFMCQGGDFTRGDGTGGESIYGAKFADENFQHKHTEPGVLSMANAGPNTNGSQFFLCTVPTPWLDGKHVVFGKVIQGMDVVAKVESVGSSSGRTSQPVVIADCGQL 171          
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: A0A146LV45_LYGHE (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LV45_LYGHE)

HSP 1 Score: 224 bits (572), Expect = 2.230e-68
Identity = 107/190 (56.32%), Postives = 136/190 (71.58%), Query Frame = 1
Query:  265 KEEVRKANAKNPRVFLDIEIADDTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 834
            K +  K   K  RVF DIEI             K VGR+T +LF++ VP+TAENFRALCTGEK +G+SG PL +  +IFHRV+P FM QGGD TR +G+GGESIYG  FADE+F L+HD+PGLLSMAN+G ++N SQFFIT  P PWLD KHVVFG+V +G ++V+ IE  GT +G P  R+ I +CG++
Sbjct:    1 KSKKAKKRKKMKRVFFDIEIGQ-----------KAVGRVTFKLFDDVVPKTAENFRALCTGEKGKGASGKPLHFKNSIFHRVIPDFMIQGGDFTRHNGTGGESIYGEKFADENFRLRHDKPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGQVEDGFDIVKKIEQQGTANGSPRTRIVITDCGEL 179          
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: A0A7S2SRD0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRD0_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.450e-68
Identity = 141/282 (50.00%), Postives = 174/282 (61.70%), Query Frame = 1
Query:   34 FRRKSNKP-EA-KKKRAWEVDVEADDNDDAGDE-TTATPSEAFLSLQKDLEEKEKIQKXXXXXXXXXXXXXXXXXXSLRRKEEVRKANAKNPR-----------VFLDIEIADDTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQIP 837
            FR+   KP EA ++KRAWE+D E D    A DE +    S+AFL L++DLE + +  K                    +R++E  K  A+              VFLDIE       K+R      VGR+ +ELF + VPRTAENFR+LC+G+  RG     L Y  NIFHR++P FMAQGGDITREDGSGG SIYG TF DES L KHD+PG+LSMANSGR +NNSQFF+TF P PWLD KHVVFG+VV G  V++ IE  G+  GEP ++V IA CG IP
Sbjct:    4 FRKPKGKPGEAPRRKRAWELDQEEDVK--AADEGSERQTSKAFLQLRQDLEARAQRVKDAE-----------------KRQQEGTKTPARAAPXXXXXXXDRICVFLDIET------KARGKHAVPVGRLKIELFNDLVPRTAENFRSLCSGDH-RG-----LWYRDNIFHRIIPGFMAQGGDITREDGSGGRSIYGETFEDESLLGKHDKPGILSMANSGRHTNNSQFFLTFKPTPWLDGKHVVFGEVVAGFSVLKSIERAGSKEGEPKEQVIIASCGAIP 254          
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: A2DT06_TRIVA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DT06_TRIVA)

HSP 1 Score: 221 bits (564), Expect = 2.890e-67
Identity = 103/181 (56.91%), Postives = 129/181 (71.27%), Query Frame = 1
Query:  292 KNPRVFLDIEIADDTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 834
            K P+ F DI I           +G KVG+I  ELF + VP+TAENFRALCTGEK  G SG PLSY G +FHR++P+FM QGGD TR +G+GGESIYG  F DE+F +KHD+PGLLSMAN+G ++N SQFFIT    PWLD  H VFG+V+EGM++V+ IE CGT SG P     + +CG++
Sbjct:    3 KRPKTFFDISI-----------RGDKVGKIVFELFNDIVPKTAENFRALCTGEKGIGKSGMPLSYKGTMFHRIIPQFMIQGGDFTRFNGTGGESIYGMKFDDENFKVKHDKPGLLSMANAGPNTNGSQFFITTVETPWLDGHHCVFGQVIEGMDIVKQIESCGTESGRPRAMCMVTDCGEM 172          
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: A0A8K0AHI2_ANDGO (Cyclophilin (Peptidylprolyl isomerase) n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0AHI2_ANDGO)

HSP 1 Score: 221 bits (563), Expect = 3.810e-67
Identity = 105/180 (58.33%), Postives = 131/180 (72.78%), Query Frame = 1
Query:  295 NPRVFLDIEIADDTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 834
            NPRVF D+ I             +  GRI  ELF N VP+TAENFR+LCTGEK  G SG PL Y G+IFHRV+P+FMAQGGD TR +G+GGESIYG  FADE+F LKHD+PGLLSMAN+G  +N SQFF+TF   PWLD KHVVFG+VVEG E++  +E  G+ SG+    +++++CGQ+
Sbjct:    3 NPRVFFDLSI-----------NNQPAGRIVFELFANIVPKTAENFRSLCTGEKGTGKSGKPLHYKGSIFHRVIPQFMAQGGDFTRGNGTGGESIYGEKFADENFKLKHDKPGLLSMANAGPGTNGSQFFLTFVECPWLDGKHVVFGQVVEGKELLPKLESLGSQSGKTKVPIEVSDCGQL 171          
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: UPI0018FE4581 (peptidylprolyl isomerase n=1 Tax=Streptomyces sp. NRRL F-5126 TaxID=1463857 RepID=UPI0018FE4581)

HSP 1 Score: 219 bits (559), Expect = 1.460e-66
Identity = 106/180 (58.89%), Postives = 131/180 (72.78%), Query Frame = 1
Query:  295 NPRVFLDIEIADDTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 834
            NPRV+ D+ + D              GRIT ELF + VP+TAENFRALCTGE+  G SG PL + G+ FHRV+P+FM QGGD TR DG+GGESIYG  FADE+F LKHD PG+LSMAN+GR++N SQFFI   P PWLD KHVVFGKV++ ME+V+ IE  G+ +G+ TK V I+ CGQ+
Sbjct:    2 NPRVYFDMTVGDVAA-----------GRITFELFADVVPKTAENFRALCTGERGVGKSGKPLHFEGSKFHRVIPQFMCQGGDFTRGDGTGGESIYGGKFADENFDLKHDVPGILSMANAGRNTNGSQFFICTVPTPWLDGKHVVFGKVIDNMELVKTIESVGSQNGKTTKDVVISACGQL 170          
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Match: UPI001684B3C2 (peptidylprolyl isomerase n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001684B3C2)

HSP 1 Score: 219 bits (558), Expect = 2.360e-66
Identity = 109/180 (60.56%), Postives = 128/180 (71.11%), Query Frame = 1
Query:  295 NPRVFLDIEIADDTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 834
            NP+VF D+ I            G+  GRI +EL  + VP TAENFRALCTGEK  GSSG PL Y G+ FHRV+P FM QGGD T+ +G+GGESIYG TFADE+F LKH  PGLLSMAN+G  +N SQFF+T    PWLD KHVVFG VVEGM+VVR IE  GT SG+  + V IA+CGQ+
Sbjct:    6 NPKVFFDVTIG-----------GQPAGRIVMELRADVVPETAENFRALCTGEKGTGSSGKPLHYKGSSFHRVIPNFMCQGGDFTQGNGTGGESIYGRTFADENFQLKHTTPGLLSMANAGPGTNGSQFFLTTVETPWLDGKHVVFGAVVEGMDVVRAIEQVGTPSGKTRQSVVIADCGQL 174          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig903.19968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2J2_ECTSI2.650e-12372.87PPIase cyclophilin-type domain-containing protein ... [more]
A0A7S2V5N2_9STRA8.530e-7148.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A455B6L4_PHYMC2.310e-6963.19Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physet... [more]
A0A388MFL0_CHABU4.460e-6960.56Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chara ... [more]
A0A146LV45_LYGHE2.230e-6856.32Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A0A7S2SRD0_9STRA2.450e-6850.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizoc... [more]
A2DT06_TRIVA2.890e-6756.91Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tricho... [more]
A0A8K0AHI2_ANDGO3.810e-6758.33Cyclophilin (Peptidylprolyl isomerase) n=1 Tax=And... [more]
UPI0018FE45811.460e-6658.89peptidylprolyl isomerase n=1 Tax=Streptomyces sp. ... [more]
UPI001684B3C22.360e-6660.56peptidylprolyl isomerase n=1 Tax=Pseudanabaena sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig903contigS-firma_M_contig903:22181..25799 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.8
Seed ortholog evalue4.1e-101
Seed eggNOG ortholog2880.D7G2J2
KEGG koko:K01802
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0865@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCyclophilin-like domain
Ec32 orthologEc-12_001720.1
Exons7
Model size1359
Cds size981
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828726.4310908-UTR-S-firma_M_contig903:22180..225281622828726.4310908-UTR-S-firma_M_contig903:22180..22528Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig903 22181..22528 -
1697105125.1525412-UTR-S-firma_M_contig903:22180..225281697105125.1525412-UTR-S-firma_M_contig903:22180..22528Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig903 22181..22528 -
1622828726.5380206-UTR-S-firma_M_contig903:25769..257991622828726.5380206-UTR-S-firma_M_contig903:25769..25799Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig903 25770..25799 -
1697105125.2468607-UTR-S-firma_M_contig903:25769..257991697105125.2468607-UTR-S-firma_M_contig903:25769..25799Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig903 25770..25799 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828726.4430692-CDS-S-firma_M_contig903:22528..228041622828726.4430692-CDS-S-firma_M_contig903:22528..22804Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 22529..22804 -
1697105125.1644864-CDS-S-firma_M_contig903:22528..228041697105125.1644864-CDS-S-firma_M_contig903:22528..22804Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 22529..22804 -
1622828726.4578123-CDS-S-firma_M_contig903:23278..233611622828726.4578123-CDS-S-firma_M_contig903:23278..23361Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 23279..23361 -
1697105125.1752477-CDS-S-firma_M_contig903:23278..233611697105125.1752477-CDS-S-firma_M_contig903:23278..23361Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 23279..23361 -
1622828726.470813-CDS-S-firma_M_contig903:23716..238081622828726.470813-CDS-S-firma_M_contig903:23716..23808Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 23717..23808 -
1697105125.19181-CDS-S-firma_M_contig903:23716..238081697105125.19181-CDS-S-firma_M_contig903:23716..23808Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 23717..23808 -
1622828726.482306-CDS-S-firma_M_contig903:24236..243431622828726.482306-CDS-S-firma_M_contig903:24236..24343Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 24237..24343 -
1697105125.203994-CDS-S-firma_M_contig903:24236..243431697105125.203994-CDS-S-firma_M_contig903:24236..24343Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 24237..24343 -
1622828726.495568-CDS-S-firma_M_contig903:24694..248801622828726.495568-CDS-S-firma_M_contig903:24694..24880Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 24695..24880 -
1697105125.2147386-CDS-S-firma_M_contig903:24694..248801697105125.2147386-CDS-S-firma_M_contig903:24694..24880Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 24695..24880 -
1622828726.509879-CDS-S-firma_M_contig903:25029..252241622828726.509879-CDS-S-firma_M_contig903:25029..25224Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 25030..25224 -
1697105125.2252524-CDS-S-firma_M_contig903:25029..252241697105125.2252524-CDS-S-firma_M_contig903:25029..25224Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 25030..25224 -
1622828726.525329-CDS-S-firma_M_contig903:25727..257691622828726.525329-CDS-S-firma_M_contig903:25727..25769Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 25728..25769 -
1697105125.2360072-CDS-S-firma_M_contig903:25727..257691697105125.2360072-CDS-S-firma_M_contig903:25727..25769Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig903 25728..25769 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig903.19968.1prot_S-firma_M_contig903.19968.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig903 22529..25769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig903.19968.1

>prot_S-firma_M_contig903.19968.1 ID=prot_S-firma_M_contig903.19968.1|Name=mRNA_S-firma_M_contig903.19968.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=327bp
MFRRKSNKPEAKKKRAWEVDVEADDNDDAGDETTATPSEAFLSLQKDLEE
KEKIQKENEERIKNEQSKAAEVENSLRRKEEVRKANAKNPRVFLDIEIAD
DTGAKSRLTKGKKVGRITLELFENAVPRTAENFRALCTGEKPRGSSGFPL
SYLGNIFHRVVPKFMAQGGDITREDGSGGESIYGPTFADESFLLKHDQPG
LLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRMIEDCG
TTSGEPTKRVQIAECGQIPDEDEKEEEEEEEEGGEKRKASDVEEEEEEEE
QEGGRRGKKRPRVRFAKTDGDAASNG*
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mRNA from alignment at S-firma_M_contig903:22181..25799-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig903.19968.1 ID=mRNA_S-firma_M_contig903.19968.1|Name=mRNA_S-firma_M_contig903.19968.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3619bp|location=Sequence derived from alignment at S-firma_M_contig903:22181..25799- (Sphaerotrichia firma Sfir_13m male)
CCCTTGCTGCTTGCTTTGAGCTTCCTGAAGATGTTTCGTCGCAAATCCAA CAAGCCGGAGGCAAAGAAGAAGGTGCGGGTGTCAACATGTCGTGATCTCC GTTGACATGGGCCGAAAAAAGCATCGTAAAGTGCAAGTTGTTCGTGCGCA GCAGACTACCCACGCACGTGCCATCGTGGTGGGCCATCCTGCTCAAGTGA ACGAGTGAACGTGCAACAGGGTTGATATGATACGAGGTTACTATTTCGCA CAACGAGATACGTGGCGTGGCAAGCTTATGCGGTTTGAAGCTTCTAGCTC TCGTGGATTGCCAGTGATCCATTGATCTACCGCAGGCGAAATGATACATT CCGCCATACGGCGCACGCATCCGAGACAAGATACATGAATAGTCCATGTT CCTACTGGAAATCTGCCGTAGATTCCAACCAATTGCGGAGCATCTAAGGT GTCCTCTCGAATCTTGTTATGCGGGTCCTCGGTTTAAATCTCGGTCTGAC TCTCCGTTCGTCGGTGAGGACGAAAGTAACCGACGGCTGCACCCCCGTTG TATTTTTCGCCATGCAACCAACCAGAGAGCCTGGGAGGTGGACGTCGAAG CGGACGACAACGACGACGCCGGCGACGAGACCACAGCCACCCCGAGCGAG GCGTTTCTCTCTCTCCAGAAAGACCTCGAGGAGAAGGAAAAAATCCAGAA GGAAAACGAGGAACGGATTAAGAATGAGCAATCCAAGGCTGCTGAGGTCG AGAACAGCCTGCGAAGAAAGGTACAAAGGTTGGTCCACGGCGGTGGAGGT GACCGCACACAACGCACAGCAGCCGTATTGTGCCTCTTGAAAAGAAGAGC AGCAGTATGGCCCATGGGTCTGAAAACCAAACGACAGATACCCCGTCCCC ACCCCCAACCCATAAACAGGAAGAGGTGCGGAAGGCCAATGCCAAGAACC CCCGAGTTTTCCTCGACATCGAGATCGCCGACGACACGGGAGCGAAGAGC CGGTTGACCAAGGGCAAAAAAGTGGGGCGAATCACGCTGGAGCTTTTTGA AAACGCGGTGCCGAGGACTGCGGAAAACTTCCGTGCGCTTTGTACCGGCG AGAAGGTGAACGCGCGTAGCTTGAAGTAAGGAGGTGGGAGGATCGAGGAC ACTGACCCGTCGTGTTCGCGAGTGCAGAGCCAAAGCACAGCAGTGAGCGA GCATTTGGCGCAGTGGCTGGATCTGTCGTCCCGGCCGTGTTTGTTGGAGC ACCGCTGTGCTGGCTGCACGATCAAAGTGCGAGTTCGACCGTGCGAGAGA CCCGCTTGTGCTGACCCCCTGAGAACGTTTTCCCGTCCTCGTTTCTTCGT TCGTGGCTGTGTATCTTGTCCGACCTACCCTGTCGCTGCTTTTTTTTAAC CACCCTGCTTGTCCTCGCCATGCTGCCTAACCCGCGAAACAAACATCTTC GTGCAGCCGCGGGGTTCGAGCGGGTTCCCCTTGAGTTATCTGGGCAATAT TTTCCACCGAGTGGTGCCCAAGTTTATGGCGCAGGGAGGCGACATCACGA GGGAAGACGGGAGGTGTGTGTGTGAGAGAGAGAGATAAAATAGTATGGCA GCGGTGGTCTCTTTCGGCTTTGATTGACCGGAGCCGAAAATGGGCTCCCT TGTAGTGTTTGAGTTGTTTCAGGCAGCCACTAGGGAACTTCGGCTCTAGT TGGAGTGCTTTCAAGTGGTGGTGCCAAGTAGGGAAAGTGCCTTCCTTTGT TGAGAATCTGTATATATGTGTGTACCAGGGTTGCGCATACAACACTGCGT TAGATTTAGCGTTCTGATGATTCCTTTGGACTATGCTCACAAACTATTGC CCCCACCAACTTATGATGGATAGAGCAACACATTGTGCGTCACAAACGGC ATGTGGATGACCCCACGGTGACATCGTTCTCTTTGCTCTTGTTGTTCGGG GGGGGGGGGGGTCCTGTTGTTGCGCTTCGTGTGTGCCGAAGCGGTGGAGA GTCCATCTACGGACCGACGTTCGCTGATGAGAGTTTCCTGCTGAAGCACG ACCAGCCGGGATTGCTATCCATGGCAAATTCAGGTGAGACCTCACTCGGG AAATCTGAACGGGTCACGGGAATGGGCGTGCTTTGGAAATGCCACGCGTC AATGGGCTTGCTGATTGCTGCACTTGGCCTTTTCGTGCCCCCACTGACTG CTGTTAAGCGCTCCTTCAAAGGCTATCGTTTCTCTAGGAAGTCGAGCACA CGCTATCGTGTACCAGGTACCATCTATTTTTCGGTGGCTCACCCCCCCTC TCGCTTGCTCGCGGGTTTATGTATGCCCGTCTGTGTAATTTTGTTCCTTG GGTCTCGTAAATTTGCTCGGAGTGACTTTGCGCGATTGCCATGTCTGTCT CGCCGCTGCTGTGTTGTTCGTGCTTTGGTCATGACCAGGCCGAGACAGCA ACAACTCTCAGTTCTTCATCACTTTCGGCCCGCTTCCTTGGCTGGACTCG AAGCACGTCGTCTTCGGCAAGGTATGCCGAAAGCATCGGTGCTCCTTCCC CGGTACCACAATAATAGCATGGTGTACCCCCTTTTTTGTCCGAGAAATGC CCAGCGCGGACTCGTTCCTGCAGTCTGCAGAAGCAGCTGTCACGGCTTGT TGCGATCTCCCTAGGCGGGCTGGGAGGGCGACCACACATATCCAGCGATG CGCATGATCTGGTGTAGATCAATGAAAAGGCTTGCGGGGGGGGCAGGCTG ATCAGCTGGAACACATGTGCTTCGTACCACATGGTAGATTTGCCGGGTGT TCTTTGCGTTATTGTTTGCTGTGCGATTGGGGTAGATCTTGGTCGAATCG CGAGGATTTTGTCCGAGATTCCATGATGCTATTCCATCCGAGCATTCCCT GGTGACCGGCTGCCCGCCCTTCCTCCCTCTCTCCCTCCCTCCCGCCTCTC TAACCCTTTCTTTCGCGTCCTCTGGCTTATTTATCTCCCTGCAAGGTGGT GGAAGGCATGGAGGTGGTGCGAATGATCGAAGACTGTGGTACTACCTCGG GAGAGCCGACCAAGAGGGTGCAGATCGCCGAATGCGGGCAAATCCCGGAC GAGGATGAGAAGGAGGAGGAGGAGGAGGAGGAGGAAGGGGGAGAGAAGCG AAAAGCGAGCGATGTTGAAGAGGAGGAGGAGGAGGAAGAGCAGGAAGGTG GGCGGCGAGGGAAGAAACGGCCAAGAGTACGGTTCGCAAAGACCGATGGT GATGCTGCTTCCAACGGGTGATACCAACGGGGACGACTATAAATAATGGA TTAGACCAGGCGTGACAGCGAGGGGGTAAGGGCTCCCGAAGGAACTAGCG TTTTTTGTTTGGTGCTCCTCGCAGTTTGGCTGGGTATAGTTGAATGCTGC TGCCTAAAAGAATATTGAAGACTTCCATTTGTGCCTATACATGAGCACAC GCTTGTGCAGACTTGCTCACGATAATAATGGTGATTGCGTCGACTGAAGT GCCCTCTCCCTCGTTGGAACAGCTGCAAGTGTTTTGCTCCAGTAAACGCA TGTGGCATATTTTGCAGCTGTACCGCCAGGCTGTGCTGTGCACGCGGTGC CGCAAAACGCCGTAGCACG
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Coding sequence (CDS) from alignment at S-firma_M_contig903:22181..25799-

>mRNA_S-firma_M_contig903.19968.1 ID=mRNA_S-firma_M_contig903.19968.1|Name=mRNA_S-firma_M_contig903.19968.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1962bp|location=Sequence derived from alignment at S-firma_M_contig903:22181..25799- (Sphaerotrichia firma Sfir_13m male)
ATGTTTCGTCGCAAATCCAACAAGCCGGAGGCAAAGAAGAAGATGTTTCG
TCGCAAATCCAACAAGCCGGAGGCAAAGAAGAAGAGAGCCTGGGAGGTGG
ACGTCGAAGCGGACGACAACGACGACGCCGGCGACGAGACCACAGCCACC
CCGAGCGAGGCGTTTCTCTCTCTCCAGAAAGACCTCGAGGAGAAGGAAAA
AATCCAGAAGGAAAACGAGGAACGGATTAAGAATGAGCAATCCAAGGCTG
CTGAGGTCGAGAACAGCCTGCGAAGAAAGAGAGCCTGGGAGGTGGACGTC
GAAGCGGACGACAACGACGACGCCGGCGACGAGACCACAGCCACCCCGAG
CGAGGCGTTTCTCTCTCTCCAGAAAGACCTCGAGGAGAAGGAAAAAATCC
AGAAGGAAAACGAGGAACGGATTAAGAATGAGCAATCCAAGGCTGCTGAG
GTCGAGAACAGCCTGCGAAGAAAGGAAGAGGTGCGGAAGGCCAATGCCAA
GAACCCCCGAGTTTTCCTCGACATCGAGATCGCCGACGACACGGGAGCGA
AGAGCCGGTTGACCAAGGGCAAAAAAGTGGGGCGAATCACGCTGGAGCTT
TTTGAAAACGCGGTGCCGAGGACTGCGGAAAACTTCCGTGCGCTTTGTAC
CGGCGAGAAGGAAGAGGTGCGGAAGGCCAATGCCAAGAACCCCCGAGTTT
TCCTCGACATCGAGATCGCCGACGACACGGGAGCGAAGAGCCGGTTGACC
AAGGGCAAAAAAGTGGGGCGAATCACGCTGGAGCTTTTTGAAAACGCGGT
GCCGAGGACTGCGGAAAACTTCCGTGCGCTTTGTACCGGCGAGAAGCCGC
GGGGTTCGAGCGGGTTCCCCTTGAGTTATCTGGGCAATATTTTCCACCGA
GTGGTGCCCAAGTTTATGGCGCAGGGAGGCGACATCACGAGGGAAGACGG
GAGCCGCGGGGTTCGAGCGGGTTCCCCTTGAGTTATCTGGGCAATATTTT
CCACCGAGTGGTGCCCAAGTTTATGGCGCAGGGAGGCGACATCACGAGGG
AAGACGGGAGCGGTGGAGAGTCCATCTACGGACCGACGTTCGCTGATGAG
AGTTTCCTGCTGAAGCACGACCAGCCGGGATTGCTATCCATGGCAAATTC
AGCGGTGGAGAGTCCATCTACGGACCGACGTTCGCTGATGAGAGTTTCCT
GCTGAAGCACGACCAGCCGGGATTGCTATCCATGGCAAATTCAGGCCGAG
ACAGCAACAACTCTCAGTTCTTCATCACTTTCGGCCCGCTTCCTTGGCTG
GACTCGAAGCACGTCGTCTTCGGCAAGGCCGAGACAGCAACAACTCTCAG
TTCTTCATCACTTTCGGCCCGCTTCCTTGGCTGGACTCGAAGCACGTCGT
CTTCGGCAAGGTGGTGGAAGGCATGGAGGTGGTGCGAATGATCGAAGACT
GTGGTACTACCTCGGGAGAGCCGACCAAGAGGGTGCAGATCGCCGAATGC
GGGCAAATCCCGGACGAGGATGAGAAGGAGGAGGAGGAGGAGGAGGAGGA
AGGGGGAGAGAAGCGAAAAGCGAGCGATGTTGAAGAGGAGGAGGAGGAGG
AAGAGCAGGAAGGTGGGCGGCGAGGGAAGAAACGGCCAAGAGTACGGTTC
GCAAAGACCGATGGTGATGCTGCTTCCAACGGGTGAGTGGTGGAAGGCAT
GGAGGTGGTGCGAATGATCGAAGACTGTGGTACTACCTCGGGAGAGCCGA
CCAAGAGGGTGCAGATCGCCGAATGCGGGCAAATCCCGGACGAGGATGAG
AAGGAGGAGGAGGAGGAGGAGGAGGAAGGGGGAGAGAAGCGAAAAGCGAG
CGATGTTGAAGAGGAGGAGGAGGAGGAAGAGCAGGAAGGTGGGCGGCGAG
GGAAGAAACGGCCAAGAGTACGGTTCGCAAAGACCGATGGTGATGCTGCT
TCCAACGGGTGA
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