mRNA_S-firma_M_contig901.19942.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: A0A6H5JPE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPE5_9PHAE) HSP 1 Score: 166 bits (419), Expect = 1.820e-49 Identity = 92/137 (67.15%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 1 MGVTKQKDGDVGGAVECYERAARDGHAKAQHNLAAIFEKGFAGAPKNDVEAVRLFRLAAEQGLAESSYSLAMHLKFGLGERQDDAQCVYYLEQASEQASGLAKAMFNLGLMYEKRRGISPEAPEADLLEATRECYEA 411
MGVTKQK+G+ GAVECY RAARDGHAKAQHNLAAIFEKG G KND EAVRLFRLAAEQGLAESSYSLAMHLKFGLG + MYEKRRG+S +APE DLLEATRECYEA
Sbjct: 1 MGVTKQKEGNAVGAVECYGRAARDGHAKAQHNLAAIFEKGMPGVLKNDAEAVRLFRLAAEQGLAESSYSLAMHLKFGLG--IEXXXXXXXXXXXXXXXXXXXXXXXXXXXMYEKRRGVSSDAPEEDLLEATRECYEA 135
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: D7FGQ6_ECTSI (Sel1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGQ6_ECTSI) HSP 1 Score: 164 bits (415), Expect = 5.860e-46 Identity = 91/137 (66.42%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 1 MGVTKQKDGDVGGAVECYERAARDGHAKAQHNLAAIFEKGFAGAPKNDVEAVRLFRLAAEQGLAESSYSLAMHLKFGLGERQDDAQCVYYLEQASEQASGLAKAMFNLGLMYEKRRGISPEAPEADLLEATRECYEA 411
MGVTKQK+G++ GAVECY RAARDGHAKAQHNLAAIFEKG G K+D EAVRLFRLAAEQGLAESSYSLAMHLKFGLG MYEKRRG+S +APE DLLEATRECYEA
Sbjct: 1 MGVTKQKEGNIVGAVECYGRAARDGHAKAQHNLAAIFEKGMPGVLKDDAEAVRLFRLAAEQGLAESSYSLAMHLKFGLGIXXXXXXXXXXXXXXXX--XXXXXXXXXXXXMYEKRRGVSSDAPEGDLLEATRECYEA 135
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: A0A835Z1C8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C8_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.480e-25 Identity = 68/145 (46.90%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 1 MGVTKQKDGDVGGAVECYERAARDGHAKAQHNLAAIFEKGFAGAPKNDVEAVRLFRLAAEQGLAESSYSLAMHLKFGLGERQDDAQCVYYLEQASEQASGLAKAMFNLGLMYEKRRGISPEAPEADLLEATRECYEAAAEAGVTK 435
GVT Q+ G+ A Y RAA GH KAQHNLAA++EKG +G K+D EAVRLF LAAE GLAESSYSLAMH K GLG + RGI+P+ A+ L+A +ECY +AA AGV K
Sbjct: 440 QGVTHQRHGEQAAAAAMYARAAEMGHPKAQHNLAAMYEKGVSGMAKDDREAVRLFTLAAEAGLAESSYSLAMHFKLGLG--CEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGIAPDVLAAEALDAAKECYRSAAMAGVPK 582
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: A0A1B3SNZ0_9ZZZZ (SEL-1-like domain containing protein n=1 Tax=uncultured organism TaxID=155900 RepID=A0A1B3SNZ0_9ZZZZ) HSP 1 Score: 55.5 bits (132), Expect = 2.470e-7 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 25 GDVGGAVECYERAARDGHAKAQHNLAAIFEKGFAGAPKNDVEAVRLFRLAAEQGLAESSYS 207
GD A+ RAA+ G AQ+NL ++ G+ G P+ND EAV+ +RLAAEQGLA + Y+
Sbjct: 35 GDYKRALPACSRAAKQGDVYAQYNLGVMYANGY-GVPENDREAVKWYRLAAEQGLAAAQYN 94
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: A0A431NDQ2_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A431NDQ2_9PSEU) HSP 1 Score: 58.5 bits (140), Expect = 3.350e-7 Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 1 MGVTKQKDGDVGGAVECYERAARDGHAKAQHNLAAI-FEKGFAGAPKNDVEAVRLFRLAAEQGL--AESSYSLAMHLKFGLGERQDDAQCVYYLEQASEQASGLAKAMFNLGLMYEKRRGISPEAPEA 375
+G QK GD+ A+E Y++AA G+A AQ++LAAI KG K+ A++ LAAEQ A++ L + L +D A+ +Y+ +AS+Q G A+A F + + Y K G+ EA
Sbjct: 83 LGRVFQKTGDLRTAIEYYQKAADQGYAYAQYDLAAIVLGKGGGNIEKDTPSALKYLTLAAEQNFIPAQNMLGLVYDDEESL---RDYAKAIYWFNKASDQ--GDAEAKFYIAMHYSKGWGVQKSDSEA 205
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: A0A3D2Z8G4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A3D2Z8G4_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 4.220e-7 Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 64 ARDGHAKAQHNLAAIFEKGFAGAPKNDVEAVRLFRLAAEQGLAESSYSLAMHLKFGLGERQDD 252
A G A+AQ +L +I+E G G P++ EAVR +R+AAEQG +SY LA+ G G QDD
Sbjct: 36 AEQGDAEAQFDLGSIYEYGIGGVPQDQAEAVRWWRMAAEQGNLLASYGLALQYFNGNGVPQDD 98
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: A0A2P4PSZ5_RHIID (Kinase-like domain-containing protein n=11 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2P4PSZ5_RHIID) HSP 1 Score: 54.7 bits (130), Expect = 7.700e-6 Identity = 37/113 (32.74%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 4 GVTKQKDGDVGGAVECYERAARDGHAKAQHNLAAIFEKGFAGAPKNDVEAVRLFRLAAEQGLAESSYSLAMHLKFGLGERQDDAQCVYYLEQASEQASGLAKAMFNLGLMYEK 342
G+ K+ D A +C+E A +G A A+H + +G KN EA RLF+ AA++G+ ++ A L+ LG++++ + + YL A++ G + A FNLG Y K
Sbjct: 474 GIKAHKNRDYEKAWKCFEYHALNGSAYAKHWMGYYLWEG-RSVEKNQEEAARLFKEAADKGIHDAQLRYAFTLQESLGKKKEREEFIKYLTLAAD--GGNSTAQFNLGDAYIK 583
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: A0A1W9KK44_9PROT (Uncharacterized protein n=2 Tax=unclassified Proteobacteria TaxID=81684 RepID=A0A1W9KK44_9PROT) HSP 1 Score: 54.7 bits (130), Expect = 8.240e-6 Identity = 31/87 (35.63%), Postives = 48/87 (55.17%), Query Frame = 1
Query: 28 DVGGAVECYERAARDGHAKAQHNLAAIFEKGFAGAPKNDVEAVRLFRLAAEQGLAESSYSLAMHLKFGLGERQDDAQCVYYLEQASE 288
D+ AV YE+ A G+ K+ HNLA ++ G A + A LF AAE GL +S ++LA+ L GLG +Q+ + + A++
Sbjct: 965 DIAQAVSAYEKGAALGNRKSMHNLATLYAAGIATGNPDYQRAFPLFEQAAELGLVDSQFNLAVLLVNGLGAKQNLGEAYKWFTVAAQ 1051
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: A0A015IFR7_RHIIW (Non-specific serine/threonine protein kinase n=11 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015IFR7_RHIIW) HSP 1 Score: 54.3 bits (129), Expect = 1.070e-5 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 4 GVTKQKDGDVGGAVECYERAARDGHAKAQHNLAAIFEKGFAGAPKNDVEAVRLFRLAAEQGLAESSYSLAMHLKFGLGERQDDAQCVYYLEQASEQASGLAKAMFNLGLMY 336
G+ K+ D A +C+E A +G A A+H + +G KN EA RLF+ AA++G+ ++ A L+ LG++++ + + YL A++ G + A FNLG Y
Sbjct: 573 GIKAHKNRDYDKAWKCFEYHALNGSAYAKHWMGYYLWEG-RSVEKNQEEAARLFKEAADKGIHDAQLRYAFTLQKSLGKKKERDEFIKYLTLAAD--GGNSTAQFNLGDAY 680
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Match: A0A2N0PDR4_9GLOM (Kinase-like protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N0PDR4_9GLOM) HSP 1 Score: 53.9 bits (128), Expect = 1.390e-5 Identity = 37/113 (32.74%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 4 GVTKQKDGDVGGAVECYERAARDGHAKAQHNLAAIFEKGFAGAPKNDVEAVRLFRLAAEQGLAESSYSLAMHLKFGLGERQDDAQCVYYLEQASEQASGLAKAMFNLGLMYEK 342
G+ K+ D A +C+E A +G A A+H + + G KN EA RLF+ AA++G+ ++ A L+ LG++++ + + YL A++ G + A FNLG Y K
Sbjct: 405 GINAHKNRDYEKAWKCFEYHALNGSACAKHWM-GYYLWGGRSVEKNQEEAARLFKEAADKGIHDAQLRYAFTLQKSLGKKKERDEFIKYLTLAAD--GGNSTAQFNLGDAYIK 514 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig901.19942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig901.19942.1 >prot_S-firma_M_contig901.19942.1 ID=prot_S-firma_M_contig901.19942.1|Name=mRNA_S-firma_M_contig901.19942.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=148bp MGVTKQKDGDVGGAVECYERAARDGHAKAQHNLAAIFEKGFAGAPKNDVEback to top mRNA from alignment at S-firma_M_contig901:224..1604- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig901.19942.1 ID=mRNA_S-firma_M_contig901.19942.1|Name=mRNA_S-firma_M_contig901.19942.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=1381bp|location=Sequence derived from alignment at S-firma_M_contig901:224..1604- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig901:224..1604- >mRNA_S-firma_M_contig901.19942.1 ID=mRNA_S-firma_M_contig901.19942.1|Name=mRNA_S-firma_M_contig901.19942.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=888bp|location=Sequence derived from alignment at S-firma_M_contig901:224..1604- (Sphaerotrichia firma Sfir_13m male)back to top |