mRNA_S-firma_M_contig9.19924.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9.19924.1
Unique NamemRNA_S-firma_M_contig9.19924.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: B5LWA6_9PHYC (Putative sensor histidine kinase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWA6_9PHYC)

HSP 1 Score: 292 bits (748), Expect = 1.820e-91
Identity = 167/415 (40.24%), Postives = 248/415 (59.76%), Query Frame = 1
Query:    4 RMMSACIREIQVPVSDLCGLKNIMPDIPENSSIYHYAKCMNTCGILLSDMIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNE----HLVKFADDALNCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEVYMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTKSHTESIPGGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHAC--FPLSMRGWASGGVGTKKKMFHRGTIAEERNRSLSESIVSKWDYDEPREMPKILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKCPLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESIAASFQRKHKVWM 1230
            RMM +C+REIQ PV+DL GL +I+P +  +SS+Y YA CMNT G LL+ MIENMRLYY LSSG+Y+   S F LR+E+   + SLT++     + +     +   D+   +   + VPN +V +D+  + KIF +LV+NA+RFT EG I V V  + + +T    +L++ V D+GVGVP + R+ +FEP+T+ H ES+ GG GM LAVAR +C  LGG + L+ +  +  G TF A   F     GW S     +  +  +    ++R +S SE             MP IL+V+D+RLNR I+    + + +    A DG EAV+ C  +KFDLI MDI MP + G+EA + IK++CPLN  TP +ALT + +    + C +AGM++ + KP+ +K+L+     S   K  +W+
Sbjct:   55 RMMISCLREIQTPVNDLLGLTDIVPKMDPDSSLYLYAVCMNTFGNLLARMIENMRLYYQLSSGIYDPTYSNFVLRSEIHLFWRSLTSQARSHRMGENYPTIVRTGDVSCKICILETVPNDVVSTDTKVLQKIFHALVDNAIRFTQEGLIEVIVSCQKVGKTGY--VLNLVVSDTGVGVPTELRQILFEPMTRGHVESVAGGAGMSLAVARLLCRRLGGDVTLDDD--KDCGCTFRASLRFDSVSEGWPSPVWENEFVLSGKAVSTDDRRQSESE-------------MPHILVVDDIRLNREILKHHFKRLGIKIFTACDGDEAVKECVSKKFDLIFMDIYMPRLNGVEACKLIKRECPLNLNTPVVALTVSSSTMDHNECLRAGMVEMVTKPVDRKKLIHVSCRSMDPKKSLWI 452          
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: Q6XM27_9PHYC (FirrV-1-B9 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM27_9PHYC)

HSP 1 Score: 285 bits (728), Expect = 1.270e-88
Identity = 166/414 (40.10%), Postives = 249/414 (60.14%), Query Frame = 1
Query:    4 RMMSACIREIQVPVSDLCGLKNIMPDIPENSSIYHYAKCMNTCGILLSDMIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNEHLVKFADDAL--NCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEVYMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTKSHTESIPGGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTKKKMFHRGTIAE--ERNRSLSESIVSKWDYDEPREMPKILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKCPLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESIAASFQR-KHKVWM 1230
            RMM +C+REIQ+PV +L GL +I+P + ENSS++ YA  +NT G+LL++MI+N+RLYY L SG YE   S F L +EL   +++L  +   K           DI  +L    +VPN +V +D+ C+ K+F +++ NA+RFT EG + V V   +    + + ML+  V D+G+GVP   R  +FEP+TK H++++ GG GMGLAVAR +C  LGG L L     E  GSTFHA   L  R   S     +   +H  T  E  E   S   S V+    ++ R+MP+IL+VED+ LNR I+   +  V+V   ++ DG +A+  C +  +DLILMDI MP M GI+A ++IK++CPLN +TP +AL+G+        C  AGM + + KPI  + L+++I  +  + +H+ W+
Sbjct:   34 RMMISCLREIQLPVKNLMGLTDIIPVMDENSSLHEYAVTINTFGVLLAEMIDNIRLYYQLCSGTYEYVPSDFILLSELRVMWQNLIMKATQKTQRRFFVHRTGDIRCSLTISDNVPNAIVSTDALCLQKVFYAVIYNAIRFTQEGEVKVTVSATN-NTGQSQCMLNFIVSDTGIGVPRDFRGILFEPMTKGHSDTVEGGTGMGLAVARLLCRELGGDLVLTDQLTE--GSTFHAFILLKCRSIVS----WQGSEWHEETTFEFEELPSSRLPSTVTPHIKEDDRQMPRILVVEDIALNREILRHSLNRVHVNVTMSLDGEDAIHKCEEMTYDLILMDIYMPKMNGIDACKKIKQECPLNADTPIVALSGSTCTDTMKDCLAAGMTEMMVKPISHRVLIKTIYETLTKPEHQQWL 440          
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: UPI0019A94222 (Response regulator n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=UPI0019A94222)

HSP 1 Score: 160 bits (406), Expect = 1.590e-40
Identity = 116/395 (29.37%), Postives = 206/395 (52.15%), Query Frame = 1
Query:   28 EIQVPVSDLCGLKNIMPDIPENSSIYHYAKCMNTCGILLSDMIENMRLYYTLSSGLYETEK---SLFALRTELEFAFESLTNEHLVKFADDALNCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEVYMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTKSHTESIP--GGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTKKKMFHRGTIAEERNRSLSESIVSKWDYDEPREMPKILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKCPLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESIA 1197
            EI+ P+  + G   ++ +  +      Y + +   G LL  +++++     + S  +ETE+   SL  L +E+  AFE  T+E  +       +C+D +            L+E+D   + +I  + + NA++FT  G ++++V  +S+PE   K  L ++V D+G+G+  +  + +F+P T++ +      GG G+GL ++R + E LGG+LQL+  S    GSTF     +        G  T+ K+       +ERNR          D   P    +IL+V+D + N+ ++SR++++       A+DG+  VEA  K+ FDLILMD+ MP +GG+EA+ +++++   N + P IALT        + C QAG    + KPI++ EL+ +IA
Sbjct:  168 EIRTPLGAILGFSELLAESSQTERP-QYLETIRRNGNLLRTLVDDILDLAKVESTQFETEQIEISLKELISEIVDAFEPKTSEKNLGLMI-CFDCTDCD------------LIETDPIRLKQILINTLGNAVKFTEHGQVSLKVSAKSVPELSDKLKLVIEVSDTGIGISAEQAQKLFKPFTQADSSMTRKFGGTGLGLVLSRKLAEALGGTLQLK-RSTIGRGSTFEISILV--------GRVTENKVSQLNFYKQERNRQ---------DQVLPLSNLRILVVDDSKDNQFLISRLLKNSGAEVQTADDGLLGVEAALKKNFDLILMDVQMPRLGGLEATLKLRQQ---NYDKPIIALTANALKGDREKCLQAGCNDYLTKPIQRHELISTIA 527          
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: A0A2T0WK64_9BACT (PAS domain S-box-containing protein n=2 Tax=Mongoliibacter ruber TaxID=1750599 RepID=A0A2T0WK64_9BACT)

HSP 1 Score: 159 bits (401), Expect = 1.010e-38
Identity = 116/402 (28.86%), Postives = 202/402 (50.25%), Query Frame = 1
Query:   28 EIQVPVSDLCGLKNIMPDIPENSSIYHYAKCMNTCGILLSDMIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNEHLVKFADDALNCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFT-LEGTINVEVYMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTK---SHTESIPGGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTKKKMFHRGTIAEERNRSLSESIVSKWDYDEPREMPKILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKCPLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESIAASFQRKHK 1221
            EI+ P++ L G+  ++ + P +     Y K +   G  L+ +I ++  Y  + SG+ E   S+F L+ ELE  F         K    ++    ++ + +F KD+P   V  D   + ++  ++V NA++FT ++GTI +++ +E +       ML   V DSG+G+P+   + + +P  +   S+T   PG  G+GLA+++ + E++GG L++E+   + +  +F                G+ K   +R  + E     LS+S+   +         KILLVED  +N T +   M  +     VA++G+E VE  +K+ FDLILMDI MP M G+EA++EIKK   L      I L+     +  +A   AGM   + KPI  +++ + I  +F +  K
Sbjct:  591 EIRTPMNGLLGIIGLLENTPLDGKQKEYIKVIRDSGKSLNSIINDILDYSKIESGMMELNPSVFHLKEELESTF---------KLFRGSIGEKQLDFSYQFAKDIPE-YVFLDKEKLTQVIYNIVGNAIKFTPIDGTIKIDIGVEELMNDN--IMLEFSVFDSGLGIPKDKIDLLTQPFVQVDGSNTREYPG-TGLGLAISKKLIELMGGELEIESEIGKGSKFSFSV-------------FGSSK---NRVELKESNELQLSKSLGFSYLNMADSIPLKILLVEDNEINITFMLMTMEQLGYTIQVAKNGLEGVEKAKKDSFDLILMDIQMPKMNGLEATKEIKKMGHLYG-AKIIGLSANAFKEDINAALDAGMDGYLTKPISVEDIAKVIKDTFDKNKK 962          
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: A0A1W9HHI0_9PROT (Histidine kinase n=1 Tax=Proteobacteria bacterium SG_bin7 TaxID=1827384 RepID=A0A1W9HHI0_9PROT)

HSP 1 Score: 155 bits (392), Expect = 3.380e-38
Identity = 110/403 (27.30%), Postives = 195/403 (48.39%), Query Frame = 1
Query:    4 RMMSACIREIQVPVSDLCGLKNIMPDIPENSSIYHYAKCMNTCGILLSDMIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNEHLVKFADDALNCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEVYMES-IPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTK--SHTESIPGGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTKKKMFHRGTIAEERNRSLSESIVSKWDYDEPREMPKILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKCPLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESIAAS 1203
            R ++    EI+ P++ + G+  ++ D P NS    Y   +  CG  L  +I ++  +  L +G  + E   F L   +E         H +   ++  +   +E+      D P  ++ SD T + +I  +L+ NA++FT  G + ++V     I   +RK  LH  V D+G+G+P +    +F+  T+  + T  + GG G+GLA+++ +CE++GG++  E  S    GS FH      +   A    G K++           N  +  ++ +K          +ILLVED  +N+ +  +++  +     +A +G+EA+ A  ++ +DLI MD+ MP M G++A+ EI+K+         +A+T       +D C  AGM   I KPIR  E+ E I  S
Sbjct:  105 RFLANMSHEIRTPMNGVIGITGLLMDTPLNSEQKGYVDTIRDCGQNLLTIINDILDFSKLEAGKMDLEMQPFDLMHAIE---------HPIHLIEEMASKKGLELLTYISPDTPRAII-SDVTRIRQIIVNLLSNAIKFTQNGRVILKVESPGDIINGKRK--LHFYVQDTGIGIPAERVSKLFQSFTQVDASTTRVYGGTGLGLAISKRLCEMMGGTMWAE--SEMGKGSVFHFTIEAEV---ADISKGLKRESGF--------NEKIDHNLAAKHPL-------RILLVEDNVVNQRLALKLLEKMGYRADLAANGLEAIHALERQFYDLIFMDMQMPEMDGLQATREIRKRWNTGPRPRIVAMTANAMASDKDQCLAAGMDDFIGKPIRIGEVTEKILGS 475          
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: A0A2D9FWI5_9BACT (Hybrid sensor histidine kinase/response regulator n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FWI5_9BACT)

HSP 1 Score: 154 bits (389), Expect = 9.210e-38
Identity = 111/392 (28.32%), Postives = 192/392 (48.98%), Query Frame = 1
Query:   28 EIQVPVSDLCGLKNIMPDIPENSSIYHYAKCMNTCGILLSDMIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNEHLVKFADDALNCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEVYMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTKS--HTESIPGGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTKKKMFHRGTIAEERNRSLSESIVSKWDYDEPREMPKILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKC-PLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESI 1194
            EI+ P++ + G+ +++               ++  G  L  +I+++  +  + +G  E E         +EF    L N  L  F   A N   I +     + +PN L+  D   + +I  +L  NAL+FT EG + ++++ +     R K  L   + D+G+G+  +  E IFE  T++  +T+ + GG G+GL +++ + E+ GG++ +E  S +  GSTF                   +  F +G   E+      + ++++ + D+     KILL ED  +N+ ++ R +   NV   V EDGVE +EA ++  FDLILMD+ MPNM G EASE+I+K   P  ++ P IALT     ++ +    AGM   + KP    +L E +
Sbjct:  251 EIRTPMNAILGMTHLLKQDSPRKDQVEPINILDFSGKTLLSLIDDVLDFSKIEAGRIEFEA--------IEFELNKLVNVILESFKVTAQN-KGINIEASIEETIPNTLI-GDPARLTQILNNLFSNALKFTEEGAVKLKIHQQEDFGDRVK--LQFAISDTGIGIAPERVETIFESFTQASQNTKRLFGGTGLGLTISKQLAELQGGAISVE--SEKGVGSTFFV-----------------ELTFGKGEAKEDE-----QDVIAEKEGDKSLAGLKILLAEDNVVNQKVMQRFLERWNVDMTVVEDGVEVMEAMQQNNFDLILMDLQMPNMDGYEASEQIRKMDDPYKRKIPIIALTAAALKEVREQVYAAGMNDFVTKPFNPSDLEEKL 606          
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: A0A7W1Z827_9BACT (Response regulator n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7W1Z827_9BACT)

HSP 1 Score: 147 bits (372), Expect = 3.540e-37
Identity = 108/371 (29.11%), Postives = 183/371 (49.33%), Query Frame = 1
Query:  109 YAKCMNTCGILLSDMIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNEHLVKFADDALNCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEVYMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTKSHTESIP--GGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTKKKMFHRGTIAEERNRSLSESIVSKWDYDEPREMPKILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKCPLNKE-TPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESIAASFQR 1212
            Y   + T G  L  +I ++  +    SG +  E+    +   L     +LT   L K  +      +I ++ K  KDVP+ L+  D T + ++  +LV NA++FT  G + + V  E + ET+ +  +   VID+G+G+ EK  + +FE  T+   E+    GG G+GL +AR + E+ GG++++++   E +  TF+  F  +M    +  +G K K      + +E                       +LLVED  LN+ +  +++ D      +AE+GV A+E  +K+ FD+ILMDI +P M G EA+ +I+      K  TP IA+T        D C++AGM   I+KP   K L   + A+ ++
Sbjct:    6 YIDAIKTSGGNLLVIINDILDFSKAQSGKFSFEQ----IELSLSQLVSTLTELMLPKSME-----KNIRLSTKIDKDVPDSLI-GDPTRLNQVLLNLVGNAIKFTERGEVKIRV--ELLSETKDEVDIKFSVIDTGIGIEEKKLDTVFEEFTQERNETTRKYGGTGLGLTIARQLVEMQGGTIEVKSKVGEGSVFTFNLKFKKNM----NKDLGVKGKPIELPAVQQEN--------------------VNVLLVEDNLLNQILAKKVLTDWKWNVELAENGVIALEKLKKQDFDVILMDIQLPEMDGYEATRQIRNAFKAPKSITPIIAMTAHALSGESDRCRKAGMDDYISKPFDPKILYSKVIANLKK 340          
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: A0A3N9UVS5_9EURY (PAS domain S-box protein n=1 Tax=Methanothrix sp. TaxID=90426 RepID=A0A3N9UVS5_9EURY)

HSP 1 Score: 154 bits (389), Expect = 4.280e-37
Identity = 103/388 (26.55%), Postives = 197/388 (50.77%), Query Frame = 1
Query:   28 EIQVPVSDLCGLKNIMPDIPENSSIYHYAKCMNTCGILLSDMIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNEHLVKFADDALNCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEVYMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTKSHTESIP--GGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTKKKMFHRGTIAEERNRSLSESIVSKWDYDEPREMP-KILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKCPLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKEL 1182
            EI+ P++ + GL  ++ +         + + + + G  L D++ N+     + +G+ + E+  F L+  +E+A   +  +  +K  D  +   D         D P  +V  D T + +I  +L+ NA++FT +G + V V    + +   +  +H  V D+G+G+P++ ++ +F+P ++         GG G+GLA+++ + E++GG +  E  S   +GSTFH  F +S                     A     ++   + SK D D P ++  ++LL ED  +N+ +  +M+  + +   VA +G+E +EA  K ++D++LMD+ MP M G+EA+  I++K P  ++   IA+T +      + C +AGM   I+KPIR + L
Sbjct:  844 EIRTPLNAVIGLTGLLLEEDLTEVQKEHVEIIRSSGDALLDVLNNILDLSKIEAGMIDLEREPFELKNCIEWAISLVAADAKMKGLDTRIGIDD---------DTP-AIVLGDPTRLRQILINLLNNAVKFTEKGEVTVLVSSRPLGDESGRHEIHFAVKDTGIGIPDEKKDRLFQPFSQIDASMTRRYGGTGLGLAISKRLVEMMGGRIWAE--SKLGSGSTFH--FTISAL-----------------QAARASPEAVGHPLSSKRDPDLPLDLNLQVLLAEDNTVNQIVTRKMLWRLGLKADVAVNGLEVLEALAKRRYDVVLMDVQMPEMDGLEATRAIRRKWPSARQPSIIAMTASAMEGDREMCLEAGMDDYISKPIRLESL 1200          
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: A0A2D9B761_ALTSX (Histidine kinase n=2 Tax=Bacteria TaxID=2 RepID=A0A2D9B761_ALTSX)

HSP 1 Score: 149 bits (376), Expect = 5.090e-37
Identity = 114/398 (28.64%), Postives = 198/398 (49.75%), Query Frame = 1
Query:   10 MSACIREIQVPVSDLCGLKNIMPDIPENSSIYHYAKCMNTCGILLSDMIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNEHLVKFADDALNCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEVYMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTKSHTESIP--GGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTKKKMFHRGTIAEERNRSLS-ESIVSKWDYDEPREMPKILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKCPLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESI 1194
            +S    E++ P+  + GL +++ +         +   +   G  L  +I N+     L +   E EK+ F L+  +     +L      K ADD  N     + L+F + +P  LV  D   + +I  +L+ NAL+FT  G + + V  + I +      LH +V D+GVG+ +K +++IFE  +++  +     GG G+GLA+ + + +++G  +QLE+                        G G+K     +  +AE+ N S S ++     DY    E  K+L+VED ++N+ I  +++    +V  VA++G+EA++  ++  FD+ILMDI MP + GIEA++EI+K    NK+ P IALT     +  D   +AG  + I KP + +E  E I
Sbjct:   59 LSTITHELRTPLYAVTGLTHLLLEENPKPDQKEHLNSLKFSGEYLLSLINNILDLNKLEANKVELEKTTFHLKKRINDVLVALK-----KSADDKKN----NLHLEFDESIPEKLV-GDPLKLSQILINLIGNALKFTQNGDVFIRV--KKIKDASNIVHLHFEVEDNGVGISKKKQKSIFESFSQASLQINRKFGGTGLGLAIVKNLLQLMGSRIQLESQL----------------------GKGSKFWFDIKFQVAEQYNESTSPKNAALSIDYASL-ENRKVLVVEDNKINQMITKKILEKNQMVCTVADNGMEAIKLVKENTFDVILMDIHMPGISGIEATQEIRK---FNKQLPIIALTAVTIDENLDDFYRAGFNEIIPKPFKTEEFFEKI 418          
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Match: A0A2R7RZD0_9PSED (Histidine kinase n=1 Tax=Pseudomonas sp. HMWF010 TaxID=2056847 RepID=A0A2R7RZD0_9PSED)

HSP 1 Score: 149 bits (376), Expect = 6.390e-37
Identity = 120/395 (30.38%), Postives = 207/395 (52.41%), Query Frame = 1
Query:   28 EIQVPVSDLCGLKNI---MPDIPENSSIYHYAKCMNTCGILLSDMIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNEHLVKFADDALNCSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEVYMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTK---SHTESIPGGVGMGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTKKKMFHRGTIAEERNRSLSESIVSKWDYDEPREMPKILLVEDVRLNRTIVSRMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIKKKCPLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESI 1194
            EI+ P++ + G  ++   MPD+PE S +Y  A+ + + G  L  ++ ++  +  + +G  E ++      T+       L ++ L +F D A     + +TL+  + +P+ ++ +D   + ++  +L+ NA++FT +G I + +  +   ++     L + V D+G+G+P      +FE  T+   SHT    GGVG+GLA++R + E++GG +Q+E  S E  GSTF                   +   H   +   +   LS + V + D+D      +IL+V+DV +NR ++S M+    +    AEDG  AVEA  +E FDLILMD+ MP M G+ A++ I++K  LN+ TP +AL+  +  +  D C  AGM   I KPI   EL+  I
Sbjct:   79 EIRTPLTAVIGFGDLLAKMPDLPEKSLLY--AQRIASSGEALLGIVNSVLDFSRVEAGEVELQRQ----STDPV----DLASQILDQFRDKAA-AKGLTLTLEVQEPLPDTVL-ADRGRLGQVITNLLANAVKFTRQGGITIRLGYDPSAQS-----LQVAVADTGIGIPPGQSGRLFERFTQIDGSHTRQF-GGVGLGLAISRGLVELMGGEIQVE--SAEGIGSTF-------------------RFTVHAPPVFPGQ---LSTADVPQ-DHDVA--PIRILVVDDVTVNRELISAMLEPFELKLTQAEDGQAAVEAAEREPFDLILMDVQMPRMNGLSATKIIREKSKLNRRTPILALSANVLPQHVDECLWAGMNDHIGKPINVGELLGKI 428          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9.19924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B5LWA6_9PHYC1.820e-9140.24Putative sensor histidine kinase n=1 Tax=Feldmanni... [more]
Q6XM27_9PHYC1.270e-8840.10FirrV-1-B9 n=1 Tax=Feldmannia irregularis virus a ... [more]
UPI0019A942221.590e-4029.37Response regulator n=1 Tax=Bdellovibrionaceae bact... [more]
A0A2T0WK64_9BACT1.010e-3828.86PAS domain S-box-containing protein n=2 Tax=Mongol... [more]
A0A1W9HHI0_9PROT3.380e-3827.30Histidine kinase n=1 Tax=Proteobacteria bacterium ... [more]
A0A2D9FWI5_9BACT9.210e-3828.32Hybrid sensor histidine kinase/response regulator ... [more]
A0A7W1Z827_9BACT3.540e-3729.11Response regulator n=1 Tax=Bacteroidetes bacterium... [more]
A0A3N9UVS5_9EURY4.280e-3726.55PAS domain S-box protein n=1 Tax=Methanothrix sp. ... [more]
A0A2D9B761_ALTSX5.090e-3728.64Histidine kinase n=2 Tax=Bacteria TaxID=2 RepID=A0... [more]
A0A2R7RZD0_9PSED6.390e-3730.38Histidine kinase n=1 Tax=Pseudomonas sp. HMWF010 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9contigS-firma_M_contig9:61306..62547 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score153.3
Seed ortholog evalue2.5e-34
Seed eggNOG ortholog1121479.AUBS01000007_gene2303
EggNOG free text desc.Histidine kinase
EggNOG OGs1NXDJ@1224,COG0642@1,COG0642@2
COG Functional cat.T
Best tax levelProteobacteria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1242
Cds size1242
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828721.7152143-CDS-S-firma_M_contig9:61305..625471622828721.7152143-CDS-S-firma_M_contig9:61305..62547Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9 61306..62547 -
1697105122.238843-CDS-S-firma_M_contig9:61305..625471697105122.238843-CDS-S-firma_M_contig9:61305..62547Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9 61306..62547 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9.19924.1prot_S-firma_M_contig9.19924.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9 61306..62547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9.19924.1

>prot_S-firma_M_contig9.19924.1 ID=prot_S-firma_M_contig9.19924.1|Name=mRNA_S-firma_M_contig9.19924.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=414bp
MRMMSACIREIQVPVSDLCGLKNIMPDIPENSSIYHYAKCMNTCGILLSD
MIENMRLYYTLSSGLYETEKSLFALRTELEFAFESLTNEHLVKFADDALN
CSDIEVTLKFGKDVPNGLVESDSTCVLKIFQSLVENALRFTLEGTINVEV
YMESIPETRRKAMLHMKVIDSGVGVPEKAREAIFEPLTKSHTESIPGGVG
MGLAVARAMCEILGGSLQLETNSPESAGSTFHACFPLSMRGWASGGVGTK
KKMFHRGTIAEERNRSLSESIVSKWDYDEPREMPKILLVEDVRLNRTIVS
RMMRDVNVVPHVAEDGVEAVEACRKEKFDLILMDISMPNMGGIEASEEIK
KKCPLNKETPTIALTGTLAGKMEDACQQAGMIQCIAKPIRKKELVESIAA
SFQRKHKVWMVAT*
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mRNA from alignment at S-firma_M_contig9:61306..62547-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9.19924.1 ID=mRNA_S-firma_M_contig9.19924.1|Name=mRNA_S-firma_M_contig9.19924.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=1242bp|location=Sequence derived from alignment at S-firma_M_contig9:61306..62547- (Sphaerotrichia firma Sfir_13m male)
ATGAGGATGATGTCCGCTTGTATTCGCGAGATTCAAGTACCAGTGTCGGA TTTATGCGGTCTGAAAAACATCATGCCAGACATTCCCGAAAACTCCTCCA TATACCATTACGCAAAGTGCATGAACACATGTGGGATTTTACTCTCAGAC ATGATCGAAAACATGAGGTTGTACTACACTTTGTCTTCGGGTTTGTACGA GACTGAAAAATCGCTGTTCGCTCTACGAACGGAGCTTGAATTCGCGTTTG AATCCCTGACAAACGAGCATCTAGTGAAGTTTGCCGATGATGCCTTGAAT TGCAGTGACATAGAGGTGACTCTGAAGTTCGGAAAGGATGTTCCTAACGG ACTCGTTGAGAGCGACAGCACGTGTGTCTTGAAGATATTCCAGTCCTTGG TCGAAAACGCACTGCGATTCACATTGGAAGGAACAATCAACGTAGAAGTC TACATGGAGTCAATACCCGAAACAAGACGAAAGGCCATGCTTCACATGAA GGTTATTGACTCCGGAGTAGGAGTCCCCGAGAAAGCCCGAGAAGCTATTT TTGAACCGCTCACCAAATCCCACACGGAGTCAATCCCCGGCGGAGTTGGT ATGGGACTCGCGGTCGCAAGGGCCATGTGTGAGATTCTAGGTGGGAGTCT ACAACTCGAAACCAATTCACCTGAGTCCGCTGGGTCTACTTTTCACGCGT GTTTTCCTCTTTCCATGAGAGGGTGGGCCTCAGGGGGGGTTGGGACAAAG AAGAAAATGTTTCATCGAGGAACGATTGCCGAAGAGAGGAATCGTTCTTT GAGTGAGAGCATCGTGTCGAAGTGGGATTATGACGAGCCTCGTGAAATGC CCAAGATATTGTTGGTCGAAGATGTTCGGCTGAACCGGACCATAGTGTCA CGCATGATGAGAGACGTGAACGTCGTCCCCCATGTCGCAGAGGACGGCGT CGAAGCCGTCGAAGCTTGTCGTAAGGAGAAATTTGACCTCATTTTGATGG ACATTTCAATGCCAAATATGGGAGGCATCGAAGCCAGTGAAGAAATCAAG AAAAAATGCCCTCTCAACAAGGAGACTCCAACTATCGCCCTCACAGGAAC TCTTGCCGGTAAGATGGAAGACGCGTGCCAACAAGCTGGGATGATTCAAT GCATCGCAAAACCAATCAGGAAAAAAGAACTCGTAGAATCTATCGCTGCA AGTTTTCAACGCAAGCACAAAGTGTGGATGGTTGCGACTTAA
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Coding sequence (CDS) from alignment at S-firma_M_contig9:61306..62547-

>mRNA_S-firma_M_contig9.19924.1 ID=mRNA_S-firma_M_contig9.19924.1|Name=mRNA_S-firma_M_contig9.19924.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=2484bp|location=Sequence derived from alignment at S-firma_M_contig9:61306..62547- (Sphaerotrichia firma Sfir_13m male)
ATGAGGATGATGTCCGCTTGTATTCGCGAGATTCAAGTACCAGTGTCGGA
TTTATGCGGTCTGAAAAACATCATGCCAGACATTCCCGAAAACTCCTCCA
TATACCATTACGCAAAGTGCATGAACACATGTGGGATTTTACTCTCAGAC
ATGATCGAAAACATGAGGTTGTACTACACTTTGTCTTCGGGTTTGTACGA
GACTGAAAAATCGCTGTTCGCTCTACGAACGGAGCTTGAATTCGCGTTTG
AATCCCTGACAAACGAGCATCTAGTGAAGTTTGCCGATGATGCCTTGAAT
TGCAGTGACATAGAGGTGACTCTGAAGTTCGGAAAGGATGTTCCTAACGG
ACTCGTTGAGAGCGACAGCACGTGTGTCTTGAAGATATTCCAGTCCTTGG
TCGAAAACGCACTGCGATTCACATTGGAAGGAACAATCAACGTAGAAGTC
TACATGGAGTCAATACCCGAAACAAGACGAAAGGCCATGCTTCACATGAA
GGTTATTGACTCCGGAGTAGGAGTCCCCGAGAAAGCCCGAGAAGCTATTT
TTGAACCGCTCACCAAATCCCACACGGAGTCAATCCCCGGCGGAGTTGGT
ATGGGACTCGCGGTCGCAAGGGCCATGTGTGAGATTCTAGGTGGGAGTCT
ACAACTCGAAACCAATTCACCTGAGTCCGCTGGGTCTACTTTTCACGCGT
GTTTTCCTCTTTCCATGAGAGGGTGGGCCTCAGGGGGGGTTGGGACAAAG
AAGAAAATGTTTCATCGAGGAACGATTGCCGAAGAGAGGAATCGTTCTTT
GAGTGAGAGCATCGTGTCGAAGTGGGATTATGACGAGCCTCGTGAAATGC
CCAAGATATTGTTGGTCGAAGATGTTCGGCTGAACCGGACCATAGTGTCA
CGCATGATGAGAGACGTGAACGTCGTCCCCCATGTCGCAGAGGACGGCGT
CGAAGCCGTCGAAGCTTGTCGTAAGGAGAAATTTGACCTCATTTTGATGG
ACATTTCAATGCCAAATATGGGAGGCATCGAAGCCAGTGAAGAAATCAAG
AAAAAATGCCCTCTCAACAAGGAGACTCCAACTATCGCCCTCACAGGAAC
TCTTGCCGGTAAGATGGAAGACGCGTGCCAACAAGCTGGGATGATTCAAT
GCATCGCAAAACCAATCAGGAAAAAAGAACTCGTAGAATCTATCGCTGCA
AGTTTTCAACGCAAGCACAAAGTGTGGATGGTTGCGACTTAAATGAGGAT
GATGTCCGCTTGTATTCGCGAGATTCAAGTACCAGTGTCGGATTTATGCG
GTCTGAAAAACATCATGCCAGACATTCCCGAAAACTCCTCCATATACCAT
TACGCAAAGTGCATGAACACATGTGGGATTTTACTCTCAGACATGATCGA
AAACATGAGGTTGTACTACACTTTGTCTTCGGGTTTGTACGAGACTGAAA
AATCGCTGTTCGCTCTACGAACGGAGCTTGAATTCGCGTTTGAATCCCTG
ACAAACGAGCATCTAGTGAAGTTTGCCGATGATGCCTTGAATTGCAGTGA
CATAGAGGTGACTCTGAAGTTCGGAAAGGATGTTCCTAACGGACTCGTTG
AGAGCGACAGCACGTGTGTCTTGAAGATATTCCAGTCCTTGGTCGAAAAC
GCACTGCGATTCACATTGGAAGGAACAATCAACGTAGAAGTCTACATGGA
GTCAATACCCGAAACAAGACGAAAGGCCATGCTTCACATGAAGGTTATTG
ACTCCGGAGTAGGAGTCCCCGAGAAAGCCCGAGAAGCTATTTTTGAACCG
CTCACCAAATCCCACACGGAGTCAATCCCCGGCGGAGTTGGTATGGGACT
CGCGGTCGCAAGGGCCATGTGTGAGATTCTAGGTGGGAGTCTACAACTCG
AAACCAATTCACCTGAGTCCGCTGGGTCTACTTTTCACGCGTGTTTTCCT
CTTTCCATGAGAGGGTGGGCCTCAGGGGGGGTTGGGACAAAGAAGAAAAT
GTTTCATCGAGGAACGATTGCCGAAGAGAGGAATCGTTCTTTGAGTGAGA
GCATCGTGTCGAAGTGGGATTATGACGAGCCTCGTGAAATGCCCAAGATA
TTGTTGGTCGAAGATGTTCGGCTGAACCGGACCATAGTGTCACGCATGAT
GAGAGACGTGAACGTCGTCCCCCATGTCGCAGAGGACGGCGTCGAAGCCG
TCGAAGCTTGTCGTAAGGAGAAATTTGACCTCATTTTGATGGACATTTCA
ATGCCAAATATGGGAGGCATCGAAGCCAGTGAAGAAATCAAGAAAAAATG
CCCTCTCAACAAGGAGACTCCAACTATCGCCCTCACAGGAACTCTTGCCG
GTAAGATGGAAGACGCGTGCCAACAAGCTGGGATGATTCAATGCATCGCA
AAACCAATCAGGAAAAAAGAACTCGTAGAATCTATCGCTGCAAGTTTTCA
ACGCAAGCACAAAGTGTGGATGGTTGCGACTTAA
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