prot_S-firma_F_contig1108.1432.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1108.1432.1
Unique Nameprot_S-firma_F_contig1108.1432.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length555
Homology
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BLAST of mRNA_S-firma_F_contig1108.1432.1 vs. uniprot
Match: D7FW22_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW22_ECTSI)

HSP 1 Score: 583 bits (1504), Expect = 2.850e-203
Identity = 321/482 (66.60%), Postives = 360/482 (74.69%), Query Frame = 0 
Query:   78 MNETGNGEVTLWEFREYFDLPDDRSTTRLFRCFDEDRDNRIGFFEFVTGLWTYCCNCNASVVCLCFDTYDSDHNGQIAADEFDFMIEDVFGPEWEKNDKAKAAHTWFHERDDAQLGFPELGIDAWSAFVSANLQVQASTVHTRLILQKKIIGVGFWTYCLRKRITIFLGRTVNVEKVLSAHVADAVAEELAQDRKLELDHDDSTQFNLRVLRRTGPFPRRRKFRDMAGKKLAITAAAAVGAVATDKVKKFTTMTVREAFERVTVPAGQDATWEEIKAPSVLQALMSSLAVMVERPPPG-ARARSTTSTPPSLSGDNTGLSTSPATSTTKKKRPPSDALSLLKHRPGIDGAALGSPAAAAS-------EADPAIANVFYGLKPLPEAVPARRKTTGRGGSRPISARRVTARTSRTG-SPTGSALARARPSTAGAGGRAVGGGKSTLSRTGKELIYSGEIGGVGLREGQGDGEGGAGALKARML 550
            MNETGNG VTLWEFREYF+LPDDRSTTRLFRCFDEDRDNRIGF E V G+WTYCCNCNASVVCLCFD  D DHNG+I ADEF+FMI DVFGPEWEKND+AKA HTWFHERDDA LGFPE+ +DAWSAFVSAN Q+QA  VHTRL+LQKK++GVGFWT+CL K +TIFLGRT  VE++LSAHV+  + EELAQDR+LELDHDDSTQFNLRV+RRTGPFPRRRK+RDMAGKKL   AAAAVGAVA D VKKF T+TVREAFERVTVPAG+DATWE+ K PS LQALM+SL  +VER PPG A                             KK  P DAL+LLK+RPGIDGA LGSPA A S       +ADPAIAN FYGLKPLPEAV     +   G  R  +  +  ART++ G SP  S+           G RAVGGGK TLSRTGKEL+ +GE+G VG+      GEGG G L AR+L
Sbjct:    1 MNETGNGTVTLWEFREYFNLPDDRSTTRLFRCFDEDRDNRIGFLELVVGMWTYCCNCNASVVCLCFDLLDMDHNGKIGADEFNFMIVDVFGPEWEKNDEAKAVHTWFHERDDALLGFPEMDMDAWSAFVSANPQIQAPAVHTRLVLQKKVLGVGFWTHCLPKNMTIFLGRTATVEQILSAHVSPNILEELAQDRRLELDHDDSTQFNLRVIRRTGPFPRRRKYRDMAGKKLRAKAAAAVGAVAADNVKKFATLTVREAFERVTVPAGKDATWEDPKPPSTLQALMASLTAIVERAPPGGAXXXXXXXXXXXXXXXXXXXXXXSKKRKNNKKGAPPDALALLKNRPGIDGAPLGSPAVAPSSPTGSAVDADPAIANAFYGLKPLPEAVAPVSPSAAAGSGRDRA--KTAARTAKKGVSPAASSPE---------GSRAVGGGKITLSRTGKELVGAGEVGCVGVP----GGEGGTGTLSARLL 467
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1108.1432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW22_ECTSI2.850e-20366.60EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 58..208
e-value: 6.8E-21
score: 76.5
IPR028846Recoverin familyPANTHERPTHR23055CALCIUM BINDING PROTEINScoord: 64..169
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 111..123
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 147..159
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 142..169
score: 8.237
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 98..133
score: 7.874
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 59..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1108contigS-firma_F_contig1108:11926..15893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1108.1432.1mRNA_S-firma_F_contig1108.1432.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1108 11926..15893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1108.1432.1 ID=prot_S-firma_F_contig1108.1432.1|Name=mRNA_S-firma_F_contig1108.1432.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=555bp
MGGGVSNLISENQRAAMHIAILEVLPARVYALEEMRFRAGSFYDTPDFAE
QKILVPAFSTLGLHEWSISQLWRHFRKMNETGNGEVTLWEFREYFDLPDD
RSTTRLFRCFDEDRDNRIGFFEFVTGLWTYCCNCNASVVCLCFDTYDSDH
NGQIAADEFDFMIEDVFGPEWEKNDKAKAAHTWFHERDDAQLGFPELGID
AWSAFVSANLQVQASTVHTRLILQKKIIGVGFWTYCLRKRITIFLGRTVN
VEKVLSAHVADAVAEELAQDRKLELDHDDSTQFNLRVLRRTGPFPRRRKF
RDMAGKKLAITAAAAVGAVATDKVKKFTTMTVREAFERVTVPAGQDATWE
EIKAPSVLQALMSSLAVMVERPPPGARARSTTSTPPSLSGDNTGLSTSPA
TSTTKKKRPPSDALSLLKHRPGIDGAALGSPAAAASEADPAIANVFYGLK
PLPEAVPARRKTTGRGGSRPISARRVTARTSRTGSPTGSALARARPSTAG
AGGRAVGGGKSTLSRTGKELIYSGEIGGVGLREGQGDGEGGAGALKARML
AAGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR028846Recoverin