prot_S-firma_F_contig1101.1356.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1101.1356.1
Unique Nameprot_S-firma_F_contig1101.1356.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length719
Homology
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BLAST of mRNA_S-firma_F_contig1101.1356.1 vs. uniprot
Match: D7G6D4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6D4_ECTSI)

HSP 1 Score: 756 bits (1951), Expect = 3.940e-264
Identity = 426/712 (59.83%), Postives = 507/712 (71.21%), Query Frame = 0 
Query:    1 MSGPSTSAMDNHLQRYETSDA-GTESDHTP--GGDEDAE------------ETSFWGVVFADTSRPFLNNVFARWWCEHHPFIAQFIHDYGSILVQYLAPFTPGAARRAGFGCAAHDLRRALDRVDVELPGAESRWASRWRSR-CP-GGGGTALPGRIGSVCTVVGGAGVATVVVLLAAAVSWCSWRRSPPTWPILLGEAAIGSAGLAHYLAREDGHSEAKVLEAHVIALERSLGPFFRGVQTCMRMVRCSQTLNFGLRLSVPMPPVARMEGRLPAAGSSR-PDQPGVALRELRSVLMDALEGGVRQASALDNREGCAGAGSGGDTDAFFTSAGQKIDAAKCRTSHVLADLVGRETQLVADLRRFVAAVAAKVNGATAEPDVWGLWWDSQLAEVSETVREMANYFEAAGERLEAAIGSGSPPFSASCGASHGDEVAAAAEALSSLRLHYEEILVRLYSCQSNANSIVRDPAKSTADVWEVVRRGLADARLSTGPQDGDHELWQNAEHLVKCNTNDGGQSEADLNLGAS-SSENPS-DNSRHLEAGVGWVSLTTPREEGPRVFEGGSCDESATGTQQSMPDTGPGVTDVLVGVPSPGRNRAE--VAAASTATSEELVDERSRAQLVGELDSVLRARPLPPICEKHLPLECQQSLGEGESSDMVGEQSVE-QLDLSTPPAAQACPVAESRGSQNLISELRAQLSLAANEEIFSA 689
            MSG +++AMD HLQR+ TS+  G +SD +   G  ED              ETSFW  VFADTSRP  N V  RWW E  P + +F+HDYG++LV++L PFTP AARRAG+ C    L R+LDR+D+ELPG E  W+SRWRSR C  G   +AL   I SVC  VGGAGVA V++++AAAVSWCSWRRS P+W +LLGE AIGSAG+AHYLAR+DGH+EAKVLEAH++ALERSLGPFFRGV  CMRMV+CSQTL+FGLRLS+PMPPVARMEGRLPA GS   P +   ALR+LRSV+MD LEGGV QA+ L  +E C      GDTD F  S GQ  D+   ++   L+DL G E +LV DLRRF+A VAA+V G   EP++WGLWWDSQL +VSE + E+A YFEAA  +LE AIG G  PF  S   S   E+ AAAEA+SSLRLHYEEI+VR+YSCQSNA+S++RDP+KS AD WE VR+GL++ARLSTGP + D  LWQ AE LV+   N+  ++ A L  G S SSEN + D SRHLEAG GWVSL TP+EEGPRVFEGGS D  +     S PDTG  +TDV VGVPSP R+R E    AAS  T EE+V E S   LV ELDSVLRARPLPP CEK LPL  QQS+   + SD   EQS E  L ++TPP   A P+    GSQNL+SELRAQLS A NEE FS+
Sbjct:   34 MSGSASTAMDAHLQRFGTSNENGNDSDDSSSAGQREDTSSHQSAAAVAGLAETSFWSTVFADTSRPLPNTVLGRWWHEQQPIVTRFVHDYGAVLVRFLTPFTPRAARRAGYCCGCRALLRSLDRIDLELPGGEGGWSSRWRSRRCECGDRRSALTEGISSVCAAVGGAGVAAVIIMVAAAVSWCSWRRSSPSWLLLLGEVAIGSAGVAHYLARDDGHAEAKVLEAHLVALERSLGPFFRGVHACMRMVKCSQTLSFGLRLSIPMPPVARMEGRLPATGSGGLPGRAEAALRDLRSVVMDVLEGGVEQANVLQLKERC------GDTDGFLESGGQASDSGGRQSMQSLSDLAGTERRLVVDLRRFLAIVAARVEGVMVEPEMWGLWWDSQLVDVSEALAELARYFEAASGKLETAIGCGGLPFPPSGSTSASGEMTAAAEAISSLRLHYEEIVVRIYSCQSNASSLLRDPSKSAADAWEAVRQGLSEARLSTGPLNCDQNLWQKAEDLVETMANEVDETGAALKSGKSPSSENNNPDPSRHLEAGTGWVSLATPKEEGPRVFEGGSGDHPSKDDASSTPDTG--ITDVHVGVPSPVRSRCERQEGAASRPTPEEIVGEDSHELLVSELDSVLRARPLPPTCEKRLPLVSQQSIDSEDGSDTPEEQSKEWPLGVATPPTESALPI----GSQNLMSELRAQLSGAMNEEFFSS 733
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1101.1356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6D4_ECTSI3.940e-26459.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..718
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1101contigS-firma_F_contig1101:18805..22177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1101.1356.1mRNA_S-firma_F_contig1101.1356.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1101 18805..22417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1101.1356.1 ID=prot_S-firma_F_contig1101.1356.1|Name=mRNA_S-firma_F_contig1101.1356.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=719bp
MSGPSTSAMDNHLQRYETSDAGTESDHTPGGDEDAEETSFWGVVFADTSR
PFLNNVFARWWCEHHPFIAQFIHDYGSILVQYLAPFTPGAARRAGFGCAA
HDLRRALDRVDVELPGAESRWASRWRSRCPGGGGTALPGRIGSVCTVVGG
AGVATVVVLLAAAVSWCSWRRSPPTWPILLGEAAIGSAGLAHYLAREDGH
SEAKVLEAHVIALERSLGPFFRGVQTCMRMVRCSQTLNFGLRLSVPMPPV
ARMEGRLPAAGSSRPDQPGVALRELRSVLMDALEGGVRQASALDNREGCA
GAGSGGDTDAFFTSAGQKIDAAKCRTSHVLADLVGRETQLVADLRRFVAA
VAAKVNGATAEPDVWGLWWDSQLAEVSETVREMANYFEAAGERLEAAIGS
GSPPFSASCGASHGDEVAAAAEALSSLRLHYEEILVRLYSCQSNANSIVR
DPAKSTADVWEVVRRGLADARLSTGPQDGDHELWQNAEHLVKCNTNDGGQ
SEADLNLGASSSENPSDNSRHLEAGVGWVSLTTPREEGPRVFEGGSCDES
ATGTQQSMPDTGPGVTDVLVGVPSPGRNRAEVAAASTATSEELVDERSRA
QLVGELDSVLRARPLPPICEKHLPLECQQSLGEGESSDMVGEQSVEQLDL
STPPAAQACPVAESRGSQNLISELRAQLSLAANEEIFSAASSDDEGDSVL
IGDGKDNGDDDAAEETAR*
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