prot_S-firma_F_contig11.1317.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig11.1317.1
Unique Nameprot_S-firma_F_contig11.1317.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length160
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11.1317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..157
NoneNo IPR availablePFAMPF13424TPR_12coord: 31..103
e-value: 2.9E-18
score: 65.9
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 4..128
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 4..128
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 30..63
e-value: 0.01
score: 25.0
coord: 72..105
e-value: 1.0
score: 18.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..156
e-value: 1.5E-31
score: 111.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..123
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..105
score: 10.844

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig11contigS-firma_F_contig11:6365..6844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig11.1317.1mRNA_S-firma_F_contig11.1317.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig11 6069..6907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig11.1317.1 ID=prot_S-firma_F_contig11.1317.1|Name=mRNA_S-firma_F_contig11.1317.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=160bp
MGKTVEAEELFKQALCIKTNKMGPDDLENAVTLYELGRCARAERRLVKAE
KCLRQALKIVEANLGPNDLQVAWTLQELGRCVRQAGRLGEAEELLKRALR
IQEAKLGPNHASIPWTLYDLARCVGKSEPEKQIGDIVNRVDDLLKFLQRR
MKEYRRSTI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat