prot_S-firma_F_contig10863.1153.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10863.1153.1
Unique Nameprot_S-firma_F_contig10863.1153.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length207
Homology
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BLAST of mRNA_S-firma_F_contig10863.1153.1 vs. uniprot
Match: D7FXY8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY8_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 3.070e-7
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:   54 DPFDPVHQFKSEQQTQVHQEIELQKEIARENQQDRQMMPVEEAF 97
            DPFDPVHQFKSEQQTQ  +E+EL+KEIAR  +QDR+M+ +EE+F
Sbjct:  145 DPFDPVHQFKSEQQTQADKEVELEKEIARGKKQDRKML-IEESF 187
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10863.1153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXY8_ECTSI3.070e-770.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..10
score: 0.458

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10863contigS-firma_F_contig10863:293..4439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10863.1153.1mRNA_S-firma_F_contig10863.1153.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10863 155..4439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10863.1153.1 ID=prot_S-firma_F_contig10863.1153.1|Name=mRNA_S-firma_F_contig10863.1153.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=207bp
MLFFLQLARDGAVLLVSTTGRTGSPSRHPARLCRHVGYLAEEDGTVCLAM
DAFDPFDPVHQFKSEQQTQVHQEIELQKEIARENQQDRQMMPVEEAFAPP
CRQLQAAGPPGRDQETREDGVGLACHAGHLPPCGPTHTPRPGFDRTRPRT
TPTRARRSLSRKRKRAGEALVVPVCHAKEDRPHPRELARAMPSEGALIEA
TSVPSDY
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