prot_S-firma_F_contig1086.1146.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1086.1146.1
Unique Nameprot_S-firma_F_contig1086.1146.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length237
Homology
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 2.670e-57
Identity = 97/166 (58.43%), Postives = 126/166 (75.90%), Query Frame = 0
Query:   25 IQSHRTMTRVRSVSSPPLLLVFLAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLNDGYNVLLIIWSWIFRYIHVALDTIVLYGVLRQRSIDERG 190
            + SHRT+TRV+SVSSP LL + LAIS+G+ +  VPL + V+V G GF + N  Q   D + +S F++EF VG+CM +I+AWLLLFR+KEVKECW++ ARIR+Y  LTL+GTA N+ IGIC TV ++ D     L IWSW+ RYIHVALDT VLYGVLR++ +DERG
Sbjct:  116 VSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERG 281          
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.640e-56
Identity = 95/165 (57.58%), Postives = 122/165 (73.94%), Query Frame = 0
Query:   25 IQSHRTMTRVRSVSSPPLLLVFLAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLNDGYNVLLIIWSWIFRYIHVALDTIVLYGVLRQRSIDER 189
            + SHRT+ RV+SVSSP LL + LAISMG+ A  VPL + V V G  F + N  Q   D + +S F++EF VG+CM +IVAWLLLFR+KEVKECW++HARIR+Y  LT++GT  +L IGIC TV +L       L IW+W+FRYIH+ALDT VLYGVLR++ +DER
Sbjct:   67 VSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDER 231          
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.330e-52
Identity = 90/167 (53.89%), Postives = 115/167 (68.86%), Query Frame = 0
Query:   25 IQSHRTMTRVRSVSSPPLLLVFLAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLNDGYNVLLIIWSWIFRYIHVALDTIVLYGVLRQRSIDERGE 191
            + SHRTMTRV++VSSP +L + L +S  LAA  VPL +   V G  F   N     NDFI +S + +EF VG+CML+IV WL +FR+ E+KECW+ H+RIR+Y  LTL GTA NL +GICG   +  D    L  IWSW+FRYIH++ DT+VLYG LR+ SIDER E
Sbjct:   66 VSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERAE 232          
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 1.430e-52
Identity = 87/157 (55.41%), Postives = 115/157 (73.25%), Query Frame = 0
Query:   25 IQSHRTMTRVRSVSSPPLLLVFLAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLNDGYNVLLIIWSWIFRYIHVALDTIVLYGVL 181
            I SHRT+ RV+S SSP L+ + LA+S+ +A    P      VSG GF VRN+ QR  D++ +S F++EF VG+CM +IVAWLLLFR+ EVKECWK+HARIR+Y  LTL+GT  NL +G+CGT+ ++      LLI+ +W FR+IH+ALDT VLYGVL
Sbjct:   44 IMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVL 200          
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.060e-48
Identity = 98/206 (47.57%), Postives = 132/206 (64.08%), Query Frame = 0
Query:   25 IQSHRTMTRVRSVSSPPLLLVFLAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLNDGYNVLLIIWSWIFRYIHVALDTIVLYGVLRQRSIDERGEDNGTASGSGGSNLPSGR---RVSRHSSMLRRSRGSSSSS 227
            + SHRT++RV SVS+P L+L+FLAIS+  AA  VP      VSG  F V N  +   D+I +S   +EF VG+CM +IV+WL+ FR++ +KECWKLHARIR+Y +LT++GTA NL +GI G   +        L+  +W FRY HVALDTIVLYGVL  R +DE G    + SG+    LP+     R S H  M ++S  S++SS
Sbjct:   51 VNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDEGGGSAASTSGTSSGRLPASSGLPRPSNHRGMKKQSGLSNTSS 256          
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 3.990e-47
Identity = 83/167 (49.70%), Postives = 119/167 (71.26%), Query Frame = 0
Query:   25 IQSHRTMTRVRSVSSPPLLLVFLAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLNDGYNVLLIIWSWIFRYIHVALDTIVLYGVLRQRSIDERGE 191
            + S R  + V+S+S+  L+L+FLA+S GLAA  VP      +SG GF    + +R ++F+ IS F VEF VG+CM +IV+WLLLFR+ E+KECW +HA +R+Y  LTL+GT  NL +G+CGT+ +++D    LL+I+SW FR + +ALDTIVL+ VL  +S+DER E
Sbjct:   44 VMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAE 210          
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: D8LNN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN7_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 3.680e-43
Identity = 77/146 (52.74%), Postives = 99/146 (67.81%), Query Frame = 0
Query:   47 LAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLNDGYNVLLIIWSWIFRYIHVALDTIVLYGVLRQRSIDERGED 192
            L +S  LA   VPL +   V G  F   N      DF+ +S +  EF VG+CML+IV+WL +FR+KE+KECWK+H RIR+Y  LTL+GTA NL +GICG   +  D    LL IWSW+FRYI ++ DT+VLYGVLR+ SIDER E+
Sbjct:    2 LLVSASLAVATVPLWETTVVLGTAFWFTNPDPAKYDFVIMSIYIFEFIVGICMLVIVSWLAMFRMKEMKECWKIHPRIRYYFCLTLLGTAVNLGLGICGAAFVKGDRKQPLLQIWSWLFRYIQISFDTLVLYGVLREGSIDERAEE 147          
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.220e-38
Identity = 69/128 (53.91%), Postives = 97/128 (75.78%), Query Frame = 0
Query:   25 IQSHRTMTRVRSVSSPPLLLVFLAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLND 152
            + SHRT++RVRS S+P L+LVFLA+S+G+AA  VP   E+ VSG  F V+   Q  +D+I ++ F+VEFFVG+CML+IV WL++FR  E+K+ WK+HARIR+Y  LTL+ T  NL +GICGT+ ++ D
Sbjct:  142 VMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGD 269          
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.360e-37
Identity = 67/119 (56.30%), Postives = 88/119 (73.95%), Query Frame = 0
Query:   34 VRSVSSPPLLLVFLAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLND 152
            V S+SSP L++V L IS+G AA   P  + + +SG GF    + QRG+D+I IS FY+EFFVG+CM +IVAWLLLFR+ E+KECWK+HARIR+Y  LTL+ T  NL +GICG + L+ D
Sbjct:   58 VNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGD 176          
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Match: A0A6H5JZY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY2_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 6.860e-37
Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 0
Query:   25 IQSHRTMTR-VRSVSSPPLLLVFLAISMGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCMLLIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLLND 152
            +QSH      V S+SSP L++V L IS+G AA   P  D + +SG GF    + QRG+D+I +S FY+EFFVG+CM +IVAWLLLFR+ E+KECWK HARIR+Y  LTL+ T  NL +GICG + L+ D
Sbjct:  111 LQSHGDQQPGVNSLSSPLLIMVSLVISIGAAAAAAPFWDFIILSGTGFFPETENQRGSDWITVSRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKTHARIRYYFGLTLIATGVNLILGICGVIYLIGD 239          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1086.1146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FTK5_ECTSI2.670e-5758.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK4_ECTSI1.640e-5657.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWL8_9PHAE1.330e-5253.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN1_ECTSI1.430e-5255.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K8K6_9PHAE2.060e-4847.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNP0_ECTSI3.990e-4749.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNN7_ECTSI3.680e-4352.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNM4_ECTSI1.220e-3853.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNM5_ECTSI2.360e-3756.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZY2_9PHAE6.860e-3754.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 151..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..236
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..150
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..23
score: 0.545
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
NoneNo IPR availableTMHMMTMhelixcoord: 127..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1086contigS-firma_F_contig1086:626..2053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1086.1146.1mRNA_S-firma_F_contig1086.1146.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1086 39..3063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1086.1146.1 ID=prot_S-firma_F_contig1086.1146.1|Name=mRNA_S-firma_F_contig1086.1146.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=237bp
MLLSAALLLVMFSLLWIATCLLGGIQSHRTMTRVRSVSSPPLLLVFLAIS
MGLAAPIVPLADEVFVSGAGFLVRNDRQRGNDFIQISFFYVEFFVGVCML
LIVAWLLLFRVKEVKECWKLHARIRFYSLLTLVGTAANLCIGICGTVNLL
NDGYNVLLIIWSWIFRYIHVALDTIVLYGVLRQRSIDERGEDNGTASGSG
GSNLPSGRRVSRHSSMLRRSRGSSSSSKPIPATPLV*
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