prot_S-firma_F_contig10810.1088.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10810.1088.1
Unique Nameprot_S-firma_F_contig10810.1088.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length1051
Homology
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BLAST of mRNA_S-firma_F_contig10810.1088.1 vs. uniprot
Match: G4YNE4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YNE4_PHYSP)

HSP 1 Score: 75.9 bits (185), Expect = 4.680e-10
Identity = 61/212 (28.77%), Postives = 83/212 (39.15%), Query Frame = 0 
Query:  367 RLTFCPLACGYRGRADTIERHTRFVCRR----------------------------RPVACVHCGVIVPEEVLVPAHVKDECPKRLVNCRNLHLGCLEVMPLDEREHHENRKCLKRIVPCRLECGKS-FCWXXXXXXXXXGCMVY--CRQGCGHWMQRAEEGAHKP-NCPKRLTFCRRRCGEQHPLDELPEHENVTCVNIPKPCHHGCGEML 546
            RL  CPL CG R  A T+E H                                   R V C HC   VP ++L   H+  EC +R   C+   LGC   +   ++  HE+ +C KR++ CR+  G+  FC             V   C  GCG  ++  E   H   +C KRL  C+  C  + P D   EH ++ C      C  GCG  L
Sbjct:  722 RLVPCPLNCGQRLPAHTVEFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRSVFCEHCHSNVPVKLL-ETHLDKECQQRPRGCQ---LGCSIKVAWADKIEHESSQCPKRLINCRICDGEIWFCERDKHEKDECPLRVQGKCEAGCGETLRHNEIAHHLLYSCTKRLVDCKE-CKLRMPFDAFQEHRHLLCPERVVKCRKGCGMQL 928
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10810.1088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
G4YNE4_PHYSP4.680e-1028.77Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 48..77
e-value: 0.59
score: 19.2
coord: 15..44
e-value: 1.3E-4
score: 31.3
coord: 186..217
e-value: 0.15
score: 21.1
coord: 81..111
e-value: 560.0
score: 6.9
coord: 219..248
e-value: 0.0023
score: 27.2
coord: 325..354
e-value: 450.0
score: 7.6
coord: 253..282
e-value: 0.17
score: 21.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 186..218
score: 8.79
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 219..251
score: 9.671
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 15..47
score: 12.556
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 48..80
score: 9.431
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 253..275
score: 9.19
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 365..425
e-value: 1.1E-5
score: 27.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 873..923
e-value: 6.2E-9
score: 38.0
coord: 816..872
e-value: 6.2E-7
score: 31.6
coord: 555..620
e-value: 1.4E-6
score: 30.4
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 870..910
e-value: 7.1E-6
score: 26.6
coord: 555..607
e-value: 2.5E-4
score: 21.7
coord: 391..446
e-value: 8.7E-6
score: 26.3
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 498..542
score: 9.654
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 555..604
score: 10.069
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 868..912
score: 12.153
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 387..434
score: 10.234
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 786..830
score: 10.504
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 194..275
e-value: 2.8E-11
score: 43.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..357
score: 38.727
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..134
e-value: 5.3E-28
score: 99.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 7..103
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 184..350
NoneNo IPR availablePFAMPF13857Ank_5coord: 35..87
e-value: 3.8E-8
score: 33.4
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 12..118
coord: 170..355
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 856..922

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10810contigS-firma_F_contig10810:558..3930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10810.1088.1mRNA_S-firma_F_contig10810.1088.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10810 558..3997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10810.1088.1 ID=prot_S-firma_F_contig10810.1088.1|Name=mRNA_S-firma_F_contig10810.1088.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=1051bp
MVSTGELDVELTDKRGDTPLMTACSSDNYAAVEALIAAGANVNARNNARR
TALMRAAANGRRDYAAVLLAHGANVFLQDMTGKTALDWARKARHAEVVVL
LEDAAQASLRKQVRAARDERNAKLRREVLTVNDDNAKRLKKAMATGVGVQ
TVDAIMAVVRGSNLPKTTYRETLAALPRYYLDMEFHGFTALTKVAMSGDP
ELVQEMLDAGALADVETSKGFTALSWACVMGHRNVAYILLRAGATIDYPS
VTEGKTPLMQAAYNGHTDTVLLLLQFIFDRSHHADDVRKRETAARGFRTE
IEAYEFLAVDWVDEYEAAVNRVDHTGRTALAYAEERSFPDMAKTLLSSTA
RAASRREVLAKVKKDARLTFCPLACGYRGRADTIERHTRFVCRRRPVACV
HCGVIVPEEVLVPAHVKDECPKRLVNCRNLHLGCLEVMPLDEREHHENRK
CLKRIVPCRLECGKSFCWDERAHHEQHGCMVYCRQGCGHWMQRAEEGAHK
PNCPKRLTFCRRRCGEQHPLDELPEHENVTCVNIPKPCHHGCGEMLFPPD
VKDRHERFLCELRPVACKLGCGVEGLVERDRPGHEAAKCLNRVVDCELGC
GTRFLAHEIPYHHEVGEWAVCSSRLVRCRYDSLNKPIVVREDIPERIGRE
RQRGVEARAKAIEDALAAAVAEAARREMDTESSFSVRSRKASTASSSGSS
YQEPGVGAEEEEADDHPEDFTRQHVPMLASCSNVLIDRFDPDTEIARLIP
EAPHTPVDVHLHDLMFDEVPGFKYQCGWFKASDRKAHEAVCPMRRVECRL
GCGQKVPFAEIKSHTLYTCVNRFKPCKNGCGAFLKDQDRLKHETEECPLR
LVKCACGREFKPGDLDDHKAMTCPVETIFCSNFCGARLERSNLQRHLTLE
CTKRLVACPLQCGVLDLYLDHVSGGVWGKLGCVGRLTPLPGGHARGLRLP
PPHAAVHVGVRHGDCGPGPGGAQNGAVHAPPGAVPVRLRAPAAVQGHAQP
RAHLRVQAVQVPPGLWHHCDQLQPAGARGKGVRVSVPPLPPPLRHVRPQD
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
IPR002110Ankyrin_rpt