prot_S-firma_F_contig10800.1078.1 (polypeptide) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: A0A5A8DDD1_CAFRO (DNA-directed RNA polymerase subunit beta n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DDD1_CAFRO) HSP 1 Score: 348 bits (894), Expect = 3.730e-106 Identity = 178/358 (49.72%), Postives = 237/358 (66.20%), Query Frame = 0
Query: 12 WSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPGVEDAKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVDTGEQIDEEGKSHE-YFGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCENRPLSYTELQVCMRRKGE-----DGAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFDDTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
W VI AYF EKGLVRQQLDSF+ F+SN ++ +V + P + + P + Y P V RYEV F +V++ +P + EAD T+ E+FP AR RNLTY+S ++ V+W+ +N T E + + + G +PIMVQS +C L+G SD K LGEC +DQGGYFV+NGSEKV+IAQERQA+N+VYCF + PSK W EIRS EN + L V M RK E G I VR+ I IPV+ +F A+G V+ R LSHIVYD +DT+MLE +R S++EA PI E A N IGARG E +R++R R+A E LQK++LPHV +D + +KA++LGY+VHRL+LCA+G
Sbjct: 46 WMVIKAYFDEKGLVRQQLDSFNRFISNSVVDMVTNTPKMSLRPKRTYLPSVTVFPNRYEVWFADVQIGRPVNMEADESTSREIFPAEARHRNLTYQSSMFTHVVWRGYNNATDEPVTPAPEQERCWIGNIPIMVQSHFCRLRGLSDRAKTELGECKFDQGGYFVVNGSEKVIIAQERQAYNRVYCFEMRQPSKLSWRAEIRSQTENSSRPLSALNVVMYRKSERGDVQTGNNIRVRLQSIRQDIPVVTVFMAMGYVNARNTLSHIVYDPEDTEMLELLRPSLEEAAPIKRVEDARNHIGARGEEPE-ASREERERYAAEVLQKNMLPHVGTTSDVATRSRKAYFLGYVVHRLMLCALG 402
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: A0A6H5JJ47_9PHAE (DNA-directed RNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ47_9PHAE) HSP 1 Score: 330 bits (847), Expect = 1.860e-105 Identity = 178/378 (47.09%), Postives = 246/378 (65.08%), Query Frame = 0
Query: 3 DEEITQVLAWSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPGVEDAKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVDTGEQIDEEGKS----------HEYFGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCEN--RPLSYTELQVCMRRKGE-----DGAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFDDTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
+E+I+Q AW VI+AYFSEKGLVRQQLDSFD F+ + + +V S I+I P Y PG + + +++ FG+V L+KP+ E DG T +FP+ ARLRNLTY S LY D+ K + D G++ EEG+ E+ G VPIM++S++C L ++D + LGEC YDQGGYFVINGSEKVLIA ER + N VYCF ++ PSK WT+EIRS +N RP S LQ M KG +G I ++ I + +PV+++FRALG +D+ IL HIVYDF DTDM+E+ R S++EA I + A +FIG RG+ + R++R+ +A LQ++ LPHV + A + KK F+LGYMVH+LL+C++G
Sbjct: 101 EEDISQEDAWVVISAYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDTVRRTFQINFGQVYLAKPTAREKDGSLTS-MFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQEEGEGLEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQ--MYAKGTQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGS-AVNVGRNERINYAKGLLQREFLPHVGIGAGT--EAKKVFFLGYMVHKLLMCSLG 472
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: A0A453LQ85_AEGTS (DNA-directed RNA polymerase n=7 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LQ85_AEGTS) HSP 1 Score: 322 bits (826), Expect = 2.360e-103 Identity = 180/373 (48.26%), Postives = 247/373 (66.22%), Query Frame = 0
Query: 2 EDEEITQVLAWSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPG--VEDAKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVDTGEQIDEEGKSHEY----FGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCEN--RPLSYTELQVCMR---RKGEDGAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFDDTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
++EEITQ AW+VI+AYF EKGLVRQQLDSFD F+ N + IV I I P + PG E A+ ++++FG++ LSKP EADG+T LFP +ARLRNLTY + LY+DV ++ V G +E ++ EY G VPIM++S+YC L +S+ D LGEC YDQGGYFVINGSEKVLIAQE+ + N VY F ++ P+K + E+RS EN RP S +++ R + G G I + I + IP++I+FRALG V D+ IL HI YDF DT M+E +R S++EA I + + AL++IG RGA T R++R+++A E LQK++LPHV V + + KKA+Y GY++HRLL+CA+G
Sbjct: 89 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETAT-LFPKSARLRNLTYSAPLYVDVSYRV--VKKGHDCEEVTETAEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT-REKRIKYAKEILQKEMLPHVGV--GEFCETKKAYYFGYIIHRLLMCALG 455
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: A0A087GFV5_ARAAL (DNA-directed RNA polymerase (Fragment) n=2 Tax=rosids TaxID=71275 RepID=A0A087GFV5_ARAAL) HSP 1 Score: 318 bits (815), Expect = 5.090e-102 Identity = 177/371 (47.71%), Postives = 245/371 (66.04%), Query Frame = 0
Query: 2 EDEEITQVLAWSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPGVED--AKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVD-TGEQIDE-EGKSHEYFGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCEN--RPLSYTELQVCMR---RKGEDGAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFDDTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
+DEEITQ AW+VI+AYF EKGLVRQQLDSFD F+ N + IV I I P + PG + A+ Y+++FG++ LSKP E+DG+T LFP AARLRNLTY + LY+DV + GE++ E + + + G VPIM++S+YC L S+ D LGEC YDQGGYF+INGSEKVLIAQE+ + N VY F ++ P+K + E+RS EN RP S +++ R + G G I + I + IP++I+FRALG V D+ IL HI YDF DT M+E +R S++EA I + + AL++IG RGA T +++R+++A + LQK++LPHV V + + KKA+Y GY++HRLLLCA+G
Sbjct: 24 DDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETAT-LFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPPSTMFVRMLSRASAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFGDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT-KEKRIKYAKDILQKEMLPHVGV--GEFCETKKAYYFGYIIHRLLLCALG 390
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: A0A446TDI8_TRITD (DNA-directed RNA polymerase n=3 Tax=Petrosaviidae TaxID=1437197 RepID=A0A446TDI8_TRITD) HSP 1 Score: 322 bits (826), Expect = 4.170e-101 Identity = 180/373 (48.26%), Postives = 247/373 (66.22%), Query Frame = 0
Query: 2 EDEEITQVLAWSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPG--VEDAKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVDTGEQIDEEGKSHEY----FGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCEN--RPLSYTELQVCMR---RKGEDGAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFDDTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
++EEITQ AW+VI+AYF EKGLVRQQLDSFD F+ N + IV I I P + PG E A+ ++++FG++ LSKP EADG+T LFP +ARLRNLTY + LY+DV ++ V G +E ++ EY G VPIM++S+YC L +S+ D LGEC YDQGGYFVINGSEKVLIAQE+ + N VY F ++ P+K + E+RS EN RP S +++ R + G G I + I + IP++I+FRALG V D+ IL HI YDF DT M+E +R S++EA I + + AL++IG RGA T R++R+++A E LQK++LPHV V + + KKA+Y GY++HRLL+CA+G
Sbjct: 50 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETAT-LFPKSARLRNLTYSAPLYVDVSYRV--VKKGHDCEEVTETAEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT-REKRIKYAKEILQKEMLPHVGV--GEFCETKKAYYFGYIIHRLLMCALG 416
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: A0A7S1C2I4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2I4_9STRA) HSP 1 Score: 332 bits (851), Expect = 1.090e-100 Identity = 174/370 (47.03%), Postives = 240/370 (64.86%), Query Frame = 0
Query: 3 DEEITQVLAWSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPG--VEDAKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVDTGEQIDEEGKSHEYFGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCE--NRPLSYTELQVCM----RRKGEDGAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFD-DTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
D +I+Q +W +I A+F +KGLV+QQLDSFD FV + I+ P I I P + YAPG D Y +TFG LSKP+H E +T+ LFP+AARLRNLTYES L++++ + F+ DTGE E + G VP MV S +C L G++D K LGEC +DQGGYFVINGSEKV+IA ERQ++N+VYCF +K PSK W E+RS + NRP+S ++ + RR +G +I R+ I IP++I+FRALG V D+++L +VYD D D +M+E R S++EA + S + AL+ IG RG R+ RVR A+E LQK++LPHV + D + +K+++LGY+VHRLL CA+G
Sbjct: 34 DAQISQNHSWEIIRAFFKDKGLVKQQLDSFDLFVETTLQEIIEDTPHIEIRPNRQYAPGDAAVDPNVGYRITFGGAYLSKPTHNEEGSETSAPLFPSAARLRNLTYESNLFLEMTCQPFDTDTGEAAGEADEQTLLCGSVPTMVMSRFCRLYGQTDKIKTELGECVFDQGGYFVINGSEKVIIALERQSYNRVYCFEKKQPSKFSWVGEVRSRLDRSNRPISSLDILMYTSGGGRRGTHEGNQIRARVPYIREDIPIVILFRALGCVADKKVLDRVVYDLDHDPEMVEMFRPSLEEAFVVQSRDVALDHIGRRG-REHNIGREARVRHAEEILQKEMLPHVGISEDVRSRNRKSYFLGYVVHRLLQCALG 402
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: A0A3B6KPM8_WHEAT (DNA-directed RNA polymerase n=2 Tax=Triticum TaxID=4564 RepID=A0A3B6KPM8_WHEAT) HSP 1 Score: 322 bits (826), Expect = 1.110e-100 Identity = 180/373 (48.26%), Postives = 247/373 (66.22%), Query Frame = 0
Query: 2 EDEEITQVLAWSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPG--VEDAKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVDTGEQIDEEGKSHEY----FGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCEN--RPLSYTELQVCMR---RKGEDGAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFDDTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
++EEITQ AW+VI+AYF EKGLVRQQLDSFD F+ N + IV I I P + PG E A+ ++++FG++ LSKP EADG+T LFP +ARLRNLTY + LY+DV ++ V G +E ++ EY G VPIM++S+YC L +S+ D LGEC YDQGGYFVINGSEKVLIAQE+ + N VY F ++ P+K + E+RS EN RP S +++ R + G G I + I + IP++I+FRALG V D+ IL HI YDF DT M+E +R S++EA I + + AL++IG RGA T R++R+++A E LQK++LPHV V + + KKA+Y GY++HRLL+CA+G
Sbjct: 50 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETAT-LFPKSARLRNLTYSAPLYVDVSYRV--VKKGHDCEEVTETAEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT-REKRIKYAKEILQKEMLPHVGV--GEFCETKKAYYFGYIIHRLLMCALG 416
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: A0A835YQ41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ41_9STRA) HSP 1 Score: 329 bits (844), Expect = 7.930e-100 Identity = 173/374 (46.26%), Postives = 244/374 (65.24%), Query Frame = 0
Query: 3 DEEITQVLAWSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPGVEDAKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVDT-GEQIDEEGK-------SHEYFGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCEN--RPLSYTELQVCMRRKGED---GAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFDDTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
+EEITQ AW VI++YF+EKGLVRQQLDSFD F++N + IV IR+ P Y PG+E K+ +++ F +V LSKP E DG T +FP+ ARLRNLTY + LY D+ K ++ D ID++ +E+ G VPIM++ ++C L +SD + LGEC YDQGGYF+ING +KVLIAQER ++N VYCF +K PSK W E RSH E RP S LQ+ ++ G +I + + + +P++++FRALG V+D+ IL HIVYDF D +M+E+ R S++EA I S AL+FIG RG+ + R++R+++A LQK+VLPHV D+ + KK F+LGY+VH+LL+C++G
Sbjct: 13 EEEITQEDAWQVISSYFAEKGLVRQQLDSFDEFINNTMQEIVTESGDIRVTPEPQYLPGMEVTKKTFQIKFNQVYLSKPIVIEKDGSVTN-MFPHEARLRNLTYSAPLYCDIDCKIYDADNPAAPIDDKASILLAAYWKYEFLGYVPIMLRCSFCVLADRSDRELTELGECIYDQGGYFIINGRQKVLIAQERMSNNHVYCFRKKQPSKFHWVCETRSHVEGGTRPTSTMYLQMYVKGPKHSQIAGGQIRTTLPYVRTDVPIVLIFRALGFVNDKTILEHIVYDFSDAEMMEKFRPSLEEADVIQSRTLALDFIGKRGS-AANVGRNERIQYAKGLLQKEVLPHVGT--DEASETKKGFFLGYVVHKLLMCSLG 382
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: D7FHZ3_ECTSI (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ3_ECTSI) HSP 1 Score: 329 bits (844), Expect = 2.070e-99 Identity = 177/378 (46.83%), Postives = 246/378 (65.08%), Query Frame = 0
Query: 3 DEEITQVLAWSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPGVEDAKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVDTGEQIDEEGKS----------HEYFGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCEN--RPLSYTELQVCMRRKGE-----DGAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFDDTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
+E+I+Q AW VI+AYFSEKGLVRQQLDSFD F+ + + +V S I+I P Y PG + + +++ FG+V L+KP+ E DG T +FP+ ARLRNLTY S LY D+ K + D G++ E+G+ E+ G VPIM++S++C L ++D + LGEC YDQGGYFVINGSEKVLIA ER + N VYCF ++ PSK WT+EIRS +N RP S LQ M KG +G I ++ I + +PV+++FRALG +D+ IL HIVYDF DTDM+E+ R S++EA I + A +FIG RG+ + R++R+ +A LQ++ LPHV + A + KK F+LGYMVH+LL+C++G
Sbjct: 100 EEDISQEDAWVVISAYFSEKGLVRQQLDSFDEFLQSTMHELVSSAGEIKITPELQYMPGQDTVRRTFQINFGQVYLAKPTAREKDGSLTS-MFPHEARLRNLTYNSPLYCDISCKTYEADVGDRSQEDGEGLEAEEERENPKEFLGWVPIMLRSSFCVLVNRTDKELTELGECIYDQGGYFVINGSEKVLIANERMSTNHVYCFKKRQPSKFTWTSEIRSFVDNSGRPPSSMFLQ--MYAKGTQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGS-AVNVGRNERINYAKGLLQREFLPHVGIGAGT--EAKKVFFLGYMVHKLLMCSLG 471
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Match: A0A453LQP6_AEGTS (DNA-directed RNA polymerase n=9 Tax=Poales TaxID=38820 RepID=A0A453LQP6_AEGTS) HSP 1 Score: 322 bits (826), Expect = 7.570e-99 Identity = 180/373 (48.26%), Postives = 247/373 (66.22%), Query Frame = 0
Query: 2 EDEEITQVLAWSVINAYFSEKGLVRQQLDSFDAFVSNEILAIVGSMPPIRINPAKNYAPG--VEDAKERYEVTFGEVKLSKPSHFEADGKTTEELFPNAARLRNLTYESQLYIDVLWKRFNVDTGEQIDEEGKSHEY----FGLVPIMVQSTYCHLKGKSDVDKRRLGECTYDQGGYFVINGSEKVLIAQERQAHNKVYCFHRKPPSKNVWTTEIRSHCEN--RPLSYTELQVCMR---RKGEDGAEIHVRMNGILSTIPVLIMFRALGLVHDRQILSHIVYDFDDTDMLERMRASIQEARPIVSAEAALNFIGARGANSERTARDQRVRFADETLQKDVLPHVSVRADQTMKIKKAFYLGYMVHRLLLCAVG 363
++EEITQ AW+VI+AYF EKGLVRQQLDSFD F+ N + IV I I P + PG E A+ ++++FG++ LSKP EADG+T LFP +ARLRNLTY + LY+DV ++ V G +E ++ EY G VPIM++S+YC L +S+ D LGEC YDQGGYFVINGSEKVLIAQE+ + N VY F ++ P+K + E+RS EN RP S +++ R + G G I + I + IP++I+FRALG V D+ IL HI YDF DT M+E +R S++EA I + + AL++IG RGA T R++R+++A E LQK++LPHV V + + KKA+Y GY++HRLL+CA+G
Sbjct: 90 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETAT-LFPKSARLRNLTYSAPLYVDVSYRV--VKKGHDCEEVTETAEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT-REKRIKYAKEILQKEMLPHVGV--GEFCETKKAYYFGYIIHRLLMCALG 456 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10800.1078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-firma_F_contig10800.1078.1 ID=prot_S-firma_F_contig10800.1078.1|Name=mRNA_S-firma_F_contig10800.1078.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=363bpback to top |