prot_S-firma_F_contig108.1070.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig108.1070.1
Unique Nameprot_S-firma_F_contig108.1070.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length120
Homology
[Close]
BLAST of mRNA_S-firma_F_contig108.1070.1 vs. uniprot
Match: D8LKY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY9_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.420e-34
Identity = 73/88 (82.95%), Postives = 75/88 (85.23%), Query Frame = 0 
Query:   14 MKDKLFFTPEAKRARALESMVSAAERSNLLQEGAAAAGAEHMRRLELADAERLGMEKEEHALRMAIGKSALALLDKMAGEPPLQLSPP 101
            M    F +PEAKRAR L+SMVSAAERSNLLQE    AGAEHMRRLELADAERL MEKEEHALRMAIGKSALALL KMAGEPP QLSPP
Sbjct:    1 MNKSYFNSPEAKRARVLDSMVSAAERSNLLQE----AGAEHMRRLELADAERLAMEKEEHALRMAIGKSALALLSKMAGEPPPQLSPP 84
[Close]
BLAST of mRNA_S-firma_F_contig108.1070.1 vs. uniprot
Match: A0A6H5L718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L718_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.980e-30
Identity = 77/98 (78.57%), Postives = 81/98 (82.65%), Query Frame = 0 
Query:    4 RKKPGRKPGKMKDKLFFTPEAKRARALESMVSAAERSNLLQEGAAAAGAEHMRRLELADAE-RLGMEKEEHALRMAIGKSALALLDKMAGEPPLQLSP 100
            RKKPGRK GK+    F +PEAKRAR L+S+VSAAERS LLQE    AGAEHMRRL LADAE RL MEKEEHALRMAIGKSALALL KMAGEPP QLSP
Sbjct:  286 RKKPGRKLGKLNKSSFNSPEAKRARVLDSIVSAAERSILLQE----AGAEHMRRLVLADAEQRLTMEKEEHALRMAIGKSALALLSKMAGEPPPQLSP 379
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig108.1070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKY9_ECTSI3.420e-3482.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L718_9PHAE1.980e-3078.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig108contigS-firma_F_contig108:12599..13633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig108.1070.1mRNA_S-firma_F_contig108.1070.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig108 11257..13701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig108.1070.1 ID=prot_S-firma_F_contig108.1070.1|Name=mRNA_S-firma_F_contig108.1070.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=120bp
MVPRKKPGRKPGKMKDKLFFTPEAKRARALESMVSAAERSNLLQEGAAAA
GAEHMRRLELADAERLGMEKEEHALRMAIGKSALALLDKMAGEPPLQLSP
PEEPVPPPQAPHESAGSVV*
back to top