prot_S-firma_F_contig10796.1063.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10796.1063.1
Unique Nameprot_S-firma_F_contig10796.1063.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length191
Homology
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BLAST of mRNA_S-firma_F_contig10796.1063.1 vs. uniprot
Match: D7FKS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS0_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 4.450e-75
Identity = 128/196 (65.31%), Postives = 149/196 (76.02%), Query Frame = 0 
Query:    1 MQILRGYADGV-WAGTSESVTNYVTVGVSNYEAVAAAGTLSVEHTSVAEILANVARYRDALQPATAQGTHQGLLGSDNSIASILREIGGARQEKSKPVAVAITKPPETVVCFLAPE----GSSSAVGAPSS--WLLFDSHPRPQLGLTGASVRSFGGEDALFEALNDTFPSFDLRAEDNVMTSMYNMFDCIPMSLK 189
            + +L    DG  WAG+ + V N V  GV+ YEAVAA GTL+VEHTSVAEILA VARY DALQPAT + THQGLLGSD SIA +L EI G R+++S+PVAV ITKPPETVVCFL  E    G ++  GAPS+  WLLFDSHPRPQ GL GASVR F  E+AL EALND FP+ DL   D+VM+SMYNMFDC+P+SLK
Sbjct:   41 LTVLERLGDGTAWAGSPDDVANCVNTGVAMYEAVAATGTLAVEHTSVAEILATVARYHDALQPATDKVTHQGLLGSDTSIARVLGEIRGERRDQSRPVAVVITKPPETVVCFLPAESQAEGGAATTGAPSTRQWLLFDSHPRPQHGLVGASVRCFAAEEALVEALNDIFPAVDLGT-DSVMSSMYNMFDCVPLSLK 235
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10796.1063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKS0_ECTSI4.450e-7565.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10796contigS-firma_F_contig10796:489..1911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10796.1063.1mRNA_S-firma_F_contig10796.1063.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10796 2..2404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10796.1063.1 ID=prot_S-firma_F_contig10796.1063.1|Name=mRNA_S-firma_F_contig10796.1063.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=191bp
MQILRGYADGVWAGTSESVTNYVTVGVSNYEAVAAAGTLSVEHTSVAEIL
ANVARYRDALQPATAQGTHQGLLGSDNSIASILREIGGARQEKSKPVAVA
ITKPPETVVCFLAPEGSSSAVGAPSSWLLFDSHPRPQLGLTGASVRSFGG
EDALFEALNDTFPSFDLRAEDNVMTSMYNMFDCIPMSLKN*
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