prot_S-firma_F_contig1079.1052.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1079.1052.1
Unique Nameprot_S-firma_F_contig1079.1052.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length214
Homology
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: A0A6H5L770_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L770_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 3.140e-88
Identity = 154/219 (70.32%), Postives = 163/219 (74.43%), Query Frame = 0
Query:    1 MDTYS--SDTHGREEVGVGVARHVYGPASVHLLPCKIHHTGPAPVATYFRPRPPLAEGGPRSNDNAATAGVGANGDLDEGAAESEGRGXXXXXXXAE---ENAKPVVADXXXXXXXXXDDG-QKWELFEDDSAEHTARFRGRKLVGRKVELPEGVHGVVLREQPCPDGVREDHEDVTSYWAAETSFRDVMVWGHDEIRRESTVDRSLAWLEVSKSIHDP 213
            MDTYS  SDTH R EVG+G ARHVYGPASVHLLPCKIHHTGPAPVATYFRP P       R++D  A A   A    DE      G G       A    ENAK V   XXXXXX     G QKWELFEDDSAEHTARFRGRK VGRKVELP+GVHGVVLRE+PCP GVRE++EDV SYWAAETSFR+V VWGHD+ RRESTVDRSLAWLEVSKSIHDP
Sbjct:    1 MDTYSASSDTHSRCEVGIGAARHVYGPASVHLLPCKIHHTGPAPVATYFRPSPAKEN---RNSDTTAAAPT-ATALADETGNNGVGDGAARKTSTAPGSGENAKLVAXXXXXXXXGESAVGDQKWELFEDDSAEHTARFRGRKFVGRKVELPKGVHGVVLREKPCPPGVRENNEDVASYWAAETSFREVTVWGHDQPRRESTVDRSLAWLEVSKSIHDP 215          
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: D8LTC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC6_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.410e-58
Identity = 91/116 (78.45%), Postives = 98/116 (84.48%), Query Frame = 0
Query:   98 AKPVVADXXXXXXXXXDDGQKWELFEDDSAEHTARFRGRKLVGRKVELPEGVHGVVLREQPCPDGVREDHEDVTSYWAAETSFRDVMVWGHDEIRRESTVDRSLAWLEVSKSIHDP 213
            AKPV AD            QKWELFEDDSAEHTARFRGRK VGRKVELP+GVHGVVLRE+PCP GVRE++EDV SYWAAETSFR+V VWGHD+ R+ESTVDRSLAWLEVSKSIHDP
Sbjct:   88 AKPVAADGGGGDGESAVGDQKWELFEDDSAEHTARFRGRKFVGRKVELPKGVHGVVLREKPCPPGVRENNEDVASYWAAETSFREVTVWGHDQPRQESTVDRSLAWLEVSKSIHDP 203          
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: A0A5N6PVK5_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PVK5_9ASTR)

HSP 1 Score: 68.2 bits (165), Expect = 5.430e-11
Identity = 30/84 (35.71%), Postives = 44/84 (52.38%), Query Frame = 0
Query:  131 ARFRGRKLVGRKVELPEGVHGVVLREQPCPDGVREDHEDVTSYWAAETSFRDVMVWGHDEI-RRESTVDRSLAWLEVSKSIHDP 213
            A FRGRKL G  V LP+G  G V+  + C      D     + W A   FR++ +W HD +  +E    R+  W +V+K++H P
Sbjct:   48 ANFRGRKLQGTTVSLPDGYSGFVIGRKTCVKRKASDTNGGMTAWQANAKFRNITIWNHDNLPSKEDAFLRAFHWFDVAKALHKP 131          
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: A0A7S2BCT0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCT0_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 8.130e-10
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 0
Query:  131 ARFRGRKLVGRKVELPEGVHGVVLREQPCPDGVREDHEDVTSYWAAETSFRDVMVWGHD-EIRRESTVDRSLAWLEVSKSIH 211
            A FRGRKL GR V+LPEGV G++L E   P     D +    ++    +F +V VW HD +   +    R+L W+E++ +IH
Sbjct:   57 AHFRGRKLEGRAVQLPEGVEGLLLHEAEPPP----DLDAAKQFYEVRGAFNEVQVWVHDKDPSADDQTSRALEWVELASTIH 134          
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: A0A6J1KH29_CUCMA (uncharacterized protein C12B10.15c n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KH29_CUCMA)

HSP 1 Score: 63.9 bits (154), Expect = 2.910e-9
Identity = 28/84 (33.33%), Postives = 44/84 (52.38%), Query Frame = 0
Query:  131 ARFRGRKLVGRKVELPEGVHGVVLREQPCPDGVREDHEDVTSYWAAETSFRDVMVWGHDEI-RRESTVDRSLAWLEVSKSIHDP 213
            A FRGRKL G  + LPEG +G V+  +        +    +S W  +  F ++  W HD +  ++ T  RS  WL V++++H P
Sbjct:   66 AYFRGRKLQGATISLPEGYYGYVIGRKSLRKRKASEESQDSSSWQVKAKFENITYWNHDTLPTQDDTFQRSFHWLTVAQALHKP 149          
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: UPI0018FFB52A (uncharacterized protein C12B10.15c n=1 Tax=Benincasa hispida TaxID=102211 RepID=UPI0018FFB52A)

HSP 1 Score: 63.9 bits (154), Expect = 2.910e-9
Identity = 29/84 (34.52%), Postives = 45/84 (53.57%), Query Frame = 0
Query:  131 ARFRGRKLVGRKVELPEGVHGVVLREQPCPDGVREDHEDVTSYWAAETSFRDVMVWGHDEI-RRESTVDRSLAWLEVSKSIHDP 213
            A FRGRKL G  + LPEG  G VL ++        + +  +S W  +  F ++  W HD +  ++ T  RS  WL V++++H P
Sbjct:   66 AYFRGRKLQGATISLPEGYSGYVLGKKSLGKRKASEQDQNSSPWQVKAKFANITYWNHDTLPSQDDTFQRSFHWLTVAQALHKP 149          
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: UPI001FB133EA (uncharacterized protein C12B10.15c n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB133EA)

HSP 1 Score: 62.0 bits (149), Expect = 1.100e-8
Identity = 28/85 (32.94%), Postives = 45/85 (52.94%), Query Frame = 0
Query:  131 ARFRGRKLVGRKVELPEGVHGVVL-REQPCPDGVREDHEDVTSYWAAETSFRDVMVWGHDEI-RRESTVDRSLAWLEVSKSIHDP 213
            A+FRGR+L G  + +PEG  G VL ++         D ED ++ W     F+ +  W HD +  ++    RS  W+ V+K++H P
Sbjct:   55 AQFRGRRLQGTTIHMPEGYSGSVLGKKNLSKSEASSDFEDQSNCWEVNARFQSITTWNHDNLPSQDDAFLRSFHWINVAKALHRP 139          
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: A0A1E3QC38_LIPST (Uncharacterized protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3QC38_LIPST)

HSP 1 Score: 62.4 bits (150), Expect = 2.520e-8
Identity = 51/181 (28.18%), Postives = 68/181 (37.57%), Query Frame = 0
Query:   29 HLLPCKIHHTGPAPVATYFRPRPPLAEGGPRSNDNAATAGVGANGDLDEGAAESEGRGXXXXXXXAEENAKPVVADXXXXXXXXXDDGQKW--ELFEDDSAEHTARFRGRKLVGRKVELPEGVHGVVLREQPCPDGV---------REDHE-------DVTSYWAAETSFRDVMVWGHDEI 191
            H+LPCKIHH GPA V  YF+  P  ++   R   ++AT                            E +      D         D G     E      + H A FRGRKLVG+K+ LPEG  G +L   P P  +          ED         +    W +E  F ++ VW HD +
Sbjct:   27 HILPCKIHHDGPANVRRYFQVHPYKSDAS-RPKVSSATI--------------------CPTSITTESSTDITSTDLSAEETEVKDYGMSRPKESTPSPHSVHEAYFRGRKLVGQKLVLPEGYKGFILPIAPSPSDILPQTKSYFYSEDDXXXXXXXXEQEHMWKSEAEFNELFVWNHDVV 186          
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: A0A835GUW8_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835GUW8_9MAGN)

HSP 1 Score: 61.6 bits (148), Expect = 3.210e-8
Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = 0
Query:  131 ARFRGRKLVGRKVELPEGVHGVVLREQPCPDGVR---EDHEDVTSYWAAETSFRDVMVWGHDEIRRESTVD-RSLAWLEVSKSIHDP 213
            A FRGRKL G K+ +PEG  G VL ++    G R   E  E+  S+W     F+ +  W HD +   S    RSL WL V+ ++H P
Sbjct:   89 ACFRGRKLQGAKITIPEGYSGFVLGKKKS-QGKRKASETSEENLSHWEMRARFQSINYWNHDSLPSHSDAFLRSLHWLPVANALHKP 174          
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Match: A0A8K0HD88_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0HD88_9ROSA)

HSP 1 Score: 60.8 bits (146), Expect = 3.990e-8
Identity = 32/85 (37.65%), Postives = 44/85 (51.76%), Query Frame = 0
Query:  131 ARFRGRKLVGRKVELPEGVHGVVLREQPCPDGVRED-HEDVTSYWAAETSFRDVMVWGHDEI-RRESTVDRSLAWLEVSKSIHDP 213
            A FRGRKL G  V +PEG  G V+ ++        D  E+ ++ W     FRD+  W HD +   +    RS  WL V+KS+H P
Sbjct:   65 AHFRGRKLEGATVSIPEGYCGFVVGKKVLGKRKAADISEENSNCWEMNAIFRDITYWNHDSLPSHDDAFLRSFHWLAVAKSMHKP 149          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1079.1052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L770_9PHAE3.140e-8870.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTC6_ECTSI3.410e-5878.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5N6PVK5_9ASTR5.430e-1135.71Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A7S2BCT0_9STRA8.130e-1039.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6J1KH29_CUCMA2.910e-933.33uncharacterized protein C12B10.15c n=3 Tax=Cucurbi... [more]
UPI0018FFB52A2.910e-934.52uncharacterized protein C12B10.15c n=1 Tax=Beninca... [more]
UPI001FB133EA1.100e-832.94uncharacterized protein C12B10.15c n=1 Tax=Impatie... [more]
A0A1E3QC38_LIPST2.520e-828.18Uncharacterized protein n=1 Tax=Lipomyces starkeyi... [more]
A0A835GUW8_9MAGN3.210e-839.08Uncharacterized protein n=1 Tax=Coptis chinensis T... [more]
A0A8K0HD88_9ROSA3.990e-837.65Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013924Ribonuclease H2, subunit CPFAMPF08615RNase_H2_suCcoord: 28..209
e-value: 6.4E-18
score: 65.3
NoneNo IPR availableGENE3D3.30.200.130coord: 7..64
e-value: 1.7E-7
score: 32.8
coord: 112..213
e-value: 6.5E-16
score: 60.0
NoneNo IPR availablePANTHERPTHR47204FAMILY NOT NAMEDcoord: 26..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1079contigS-firma_F_contig1079:6460..8860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1079.1052.1mRNA_S-firma_F_contig1079.1052.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1079 6395..9271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1079.1052.1 ID=prot_S-firma_F_contig1079.1052.1|Name=mRNA_S-firma_F_contig1079.1052.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=214bp
MDTYSSDTHGREEVGVGVARHVYGPASVHLLPCKIHHTGPAPVATYFRPR
PPLAEGGPRSNDNAATAGVGANGDLDEGAAESEGRGGGGGGGGAEENAKP
VVADGGGEAGGAADDGQKWELFEDDSAEHTARFRGRKLVGRKVELPEGVH
GVVLREQPCPDGVREDHEDVTSYWAAETSFRDVMVWGHDEIRRESTVDRS
LAWLEVSKSIHDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013924RNase_H2_suC