prot_S-firma_F_contig10786.1047.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10786.1047.1
Unique Nameprot_S-firma_F_contig10786.1047.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length221
Homology
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BLAST of mRNA_S-firma_F_contig10786.1047.1 vs. uniprot
Match: A0A6H5KY88_9PHAE (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY88_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 7.810e-78
Identity = 174/231 (75.32%), Postives = 189/231 (81.82%), Query Frame = 0 
Query:    1 MTDALSREANLQIIQALRTLTEAPLSPARIARXXXXXXXNPLLAPLQLPLKAQSFALSRIFNRLEVALELTQEDQESLKALRRLQQLLLGGIDGAXXXXXXXXXXXSPPSPSFPFPPSPASLL-SPVNLLPSGFSLQPGAAVGPREAVDAARQAAGLAAMVGPGLASIAQKFLVQLAARTLDRLADSFDDQGK--GAADAAGG---------MVDG-QESSPRQRGRFYAD 218
            MTDAL REANLQIIQALRTLTEAPLSPARIAR XXXXXXNPLLAPLQ+P+K QSFALSRIFNRLEVALEL+QEDQESLKALRRLQQLL GGI+     XXXXXXXX      FP PPSPA+LL    ++ PSGFSLQPGAAVGPREAV+AARQAAGLA+M+GPG+ASIAQKFLVQLAARTLDRLADSFDDQG   GA   AGG         +  G +E +  +RGRFYAD
Sbjct:  963 MTDALGREANLQIIQALRTLTEAPLSPARIARAXXXXXXNPLLAPLQIPVKVQSFALSRIFNRLEVALELSQEDQESLKALRRLQQLLQGGINNDGGEXXXXXXXXXSRGVGFPLPPSPAALLPGGGSIFPSGFSLQPGAAVGPREAVEAARQAAGLASMIGPGVASIAQKFLVQLAARTLDRLADSFDDQGNKDGAGSGAGGAGGATTVEDVASGVREPASTRRGRFYAD 1193
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BLAST of mRNA_S-firma_F_contig10786.1047.1 vs. uniprot
Match: A0A835Z5E1_9STRA (Protein kinase:ABC1 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.880e-16
Identity = 84/188 (44.68%), Postives = 106/188 (56.38%), Query Frame = 0 
Query:    1 MTDALSREANLQIIQALRTLTEAPLSPARIARXXXXXXXNPLLAPLQLPLKAQSFALSRIFNRLEVALELTQEDQESLKALRRLQQLLLGGIDGAXXXXXXXXXXXSPPSPSFPFPPSPASLLSPVNLLPSGFSLQPGAAVGPREAVDAARQAAGLAAMVGPGLASIAQKFLVQLAARTLDRLADSFD 188
            MTDAL RE NLQ+++ALR   +APLSP     XXXXXXX    APLQL  + Q  A  R+  RLEVALELT +DQE+L  LRRL ++  G     XXXXXXXXXXX      F +                  +  P A + PR A  AAR    +  +V PG  ++ +K+L QL +R L RLAD+ +
Sbjct:  670 MTDALGRETNLQLLRALRGAADAPLSPLGXXXXXXXXXXXXFAAPLQLVARLQLLAFDRVAARLEVALELTADDQEALSTLRRLVEVFRGAGGXXXXXXXXXXXXXRA---QFNYGSXXXXXXXXXXXXXXAPARAPRAQLSPRRAAQAARALMSVFTLVAPGARAMTEKYLAQLLSRALTRLADNIE 854
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10786.1047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY88_9PHAE7.810e-7875.32ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z5E1_9STRA2.880e-1644.68Protein kinase:ABC1 family n=1 Tax=Tribonema minus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10786contigS-firma_F_contig10786:1197..3355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10786.1047.1mRNA_S-firma_F_contig10786.1047.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10786 92..4297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10786.1047.1 ID=prot_S-firma_F_contig10786.1047.1|Name=mRNA_S-firma_F_contig10786.1047.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=221bp
MTDALSREANLQIIQALRTLTEAPLSPARIARALAEAPMNPLLAPLQLPL
KAQSFALSRIFNRLEVALELTQEDQESLKALRRLQQLLLGGIDGAAAAAG
GGGGGRSPPSPSFPFPPSPASLLSPVNLLPSGFSLQPGAAVGPREAVDAA
RQAAGLAAMVGPGLASIAQKFLVQLAARTLDRLADSFDDQGKGAADAAGG
MVDGQESSPRQRGRFYADGQ*
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