prot_S-firma_F_contig10783.1045.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_F_contig10783.1045.1
Unique Name	prot_S-firma_F_contig10783.1045.1
Type	polypeptide
Organism	Sphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length	167

Homology

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: D7G5N8_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N8_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.750e-61
Identity = 130/163 (79.75%), Postives = 136/163 (83.44%), Query Frame = 0

Query:    4 STSAAQQRIDQWLQESGAGVAAAXXXXXXXXXXXXXXXXXXXXXXXXXVVAAAPEVVAPPAEAAPAGGSGYKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDLP 166
            STSAAQQRIDQWL+ESG   A+A   XXXXXXXXXXXXXXXXXXXXXX                   GSGYKVKIEWEGAIHE+ CDAETTLLEAAMDAGLELPSSCMSGSCLTCPGK+VSGSVDQSEGVLEDEQ +AGFLLTC+SYPESDVHFAVVDEEDLP
Sbjct:  137 STSAAQQRIDQWLRESGGEAASAPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XGSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLP 296

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: A0A835YL41_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL41_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.520e-38
Identity = 62/95 (65.26%), Postives = 77/95 (81.05%), Query Frame = 0

Query:   71 GSGYKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDL 165
            G GY V I+W+GA H + CD ETT+LEAAMDAGL+LP SCMSGSCLTCPG+L +G V+Q +GVLED+Q  AG +LTCVSYP SD+ F V+ E++L
Sbjct:  137 GDGYVVTIDWDGATHVVRCDGETTVLEAAMDAGLDLPHSCMSGSCLTCPGRLSAGRVEQGDGVLEDDQIAAGLMLTCVSYPLSDLRFEVIGEDEL 231

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: A0A2J6KNW1_LACSA (Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6KNW1_LACSA)

HSP 1 Score: 109 bits (272), Expect = 2.090e-27
Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 0

Query:   74 YKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDL 165
            YKV IE EG   E+  D + T+LE A+D+G+ +P  C  G C+TCP KL+SGSVDQSEG+L D+  E G+ L CVSYP+SD H  ++ EE+L
Sbjct:   49 YKVAIEHEGETTELEVDPDETILEKALDSGMSVPHDCKLGVCMTCPAKLLSGSVDQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 140

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: A0A103Y2Z7_CYNCS (Ferredoxin n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y2Z7_CYNCS)

HSP 1 Score: 108 bits (271), Expect = 2.790e-27
Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 0

Query:   74 YKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDL 165
            YKV IE EG   E+  D + T+LE A+D GL++P  C  G C+TCP KL+SGSV+QSEG+L D+  E G+ L CVSYP+SD H  ++ EE+L
Sbjct:   47 YKVSIEHEGQTTELEVDPDETILEKALDTGLDVPHDCKLGVCMTCPAKLLSGSVNQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 138

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: UPI0010A2FF49 (ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2FF49)

HSP 1 Score: 107 bits (266), Expect = 1.540e-26
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   74 YKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDL 165
            YKV IE +G + E+  D E T+L  A+D+GLE+P  C  G C+TCP +L+SGSVDQSEG+L D+  E G+ L C SYP SD H   + E++L
Sbjct:   46 YKVVIEHQGELRELEIDPEETILSKALDSGLEVPHDCKLGVCMTCPARLLSGSVDQSEGMLSDDVVERGYALLCASYPRSDCHIRTIPEDEL 137

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: A0A7J7LHT5_9MAGN (Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LHT5_9MAGN)

HSP 1 Score: 106 bits (265), Expect = 1.790e-26
Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   74 YKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDL 165
            YKV IE EG+I E+  D + T+L  A+D GL +P  C  G C+TCP KL+SGSVDQSEG+L D+  + G+ L CV+YP SD H   + EE+L
Sbjct:   39 YKVVIEHEGSIKELEVDEDETILNKALDIGLSVPHDCKLGVCMTCPAKLMSGSVDQSEGMLSDDVVDNGYALLCVAYPRSDCHIRTIPEEEL 130

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: A0A1Q3CXQ9_CEPFO (Fer2 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CXQ9_CEPFO)

HSP 1 Score: 106 bits (264), Expect = 4.510e-26
Identity = 49/92 (53.26%), Postives = 61/92 (66.30%), Query Frame = 0

Query:   74 YKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDL 165
            YKV IE EG   E+    + T+L  A+D+GL +P  C  G C+TCP KLVSG+VDQSEG+L D+  E G+ L C SYP SD HF  + EEDL
Sbjct:   60 YKVVIEHEGQATELDVGPDETILAKALDSGLSVPHDCKLGVCMTCPAKLVSGTVDQSEGMLSDDVVERGYALLCASYPRSDCHFRTIPEEDL 151

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: A0A6J1IWL8_CUCMA (Ferredoxin n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1IWL8_CUCMA)

HSP 1 Score: 105 bits (263), Expect = 5.720e-26
Identity = 47/92 (51.09%), Postives = 64/92 (69.57%), Query Frame = 0

Query:   74 YKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDL 165
            YKV IE EG   E+  DA+ ++L +A+D GL++P  C  G C+TCP +LVSG+VDQSEG+L D+  E G+ L CV+YP SD H   + EE+L
Sbjct:   56 YKVVIEHEGQTTELEVDADESILNSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCVAYPRSDCHIQTIPEEEL 147

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: A0A1S2YX51_CICAR (ferredoxin C 1, chloroplastic n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YX51_CICAR)

HSP 1 Score: 105 bits (261), Expect = 9.190e-26
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0

Query:   72 SGYKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDL 165
            S YKV IE EG   ++  + + T+L  A+D+GL +P  C  G C+TCP KL+SGSVDQS+G+L D+  E G+ L C SYP SD HF  + E++L
Sbjct:   46 SSYKVVIEHEGQTTQLEVEPDETILSKALDSGLSVPHDCKLGVCMTCPAKLISGSVDQSDGMLSDDVVERGYALLCASYPRSDCHFRTIPEDEL 139

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BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Match: A0A6A4QV48_LUPAL (Ferredoxin n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4QV48_LUPAL)

HSP 1 Score: 104 bits (260), Expect = 1.070e-25
Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 0

Query:   72 SGYKVKIEWEGAIHEITCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSYPESDVHFAVVDEEDL 165
            S YKV +E EG   E+  + + ++L  A+D+GL +P  C  G C+TCP +L+SGSVDQS+G+L D+  E+G+ L CVSYP SD H  ++ EE+L
Sbjct:   39 SSYKVVVEHEGKSTELEVEGDESILSKALDSGLNVPHDCKLGVCMTCPARLLSGSVDQSDGMLSDDVVESGYTLLCVSYPRSDCHIRIIPEEEL 132

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot

BLAST of mRNA_S-firma_F_contig10783.1045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G5N8_ECTSI	1.750e-61	79.75	Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G...	[more]
A0A835YL41_9STRA	3.520e-38	65.26	Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A2J6KNW1_LACSA	2.090e-27	53.26	Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6...	[more]
A0A103Y2Z7_CYNCS	2.790e-27	53.26	Ferredoxin n=1 Tax=Cynara cardunculus var. scolymu...	[more]
UPI0010A2FF49	1.540e-26	51.09	ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alb...	[more]
A0A7J7LHT5_9MAGN	1.790e-26	52.17	Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 ...	[more]
A0A1Q3CXQ9_CEPFO	4.510e-26	53.26	Fer2 domain-containing protein n=1 Tax=Cephalotus ...	[more]
A0A6J1IWL8_CUCMA	5.720e-26	51.09	Ferredoxin n=4 Tax=Cucurbitaceae TaxID=3650 RepID=...	[more]
A0A1S2YX51_CICAR	9.190e-26	48.94	ferredoxin C 1, chloroplastic n=1 Tax=Cicer arieti...	[more]
A0A6A4QV48_LUPAL	1.070e-25	47.87	Ferredoxin n=1 Tax=Lupinus albus TaxID=3870 RepID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 79..151 e-value: 2.2E-13 score: 49.9
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 74..163 score: 11.228
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 74..165 e-value: 4.2E-27 score: 91.8
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 72..165 e-value: 1.1E-24 score: 88.0
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 71..165
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 71..165
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 63..159

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_F_contig10783	contig	S-firma_F_contig10783:2419..4836 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_F_contig10783.1045.1	mRNA_S-firma_F_contig10783.1045.1	Sphaerotrichia firma ET2_F female	mRNA	S-firma_F_contig10783 2419..4836 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_F_contig10783.1045.1 ID=prot_S-firma_F_contig10783.1045.1|Name=mRNA_S-firma_F_contig10783.1045.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=167bp
PPHSTSAAQQRIDQWLQESGAGVAAAAPAAPAAPAAAAAAPPVAPVAPVA
PVVAAAPEVVAPPAEAAPAGGSGYKVKIEWEGAIHEITCDAETTLLEAAM
DAGLELPSSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGFLLTCVSY
PESDVHFAVVDEEDLP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036010	2Fe-2S_ferredoxin-like_sf
IPR012675	Beta-grasp_dom_sf
IPR010241	Fd_pln
IPR001041	2Fe-2S_ferredoxin-type