prot_S-firma_F_contig10762.1026.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10762.1026.1
Unique Nameprot_S-firma_F_contig10762.1026.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length227
Homology
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BLAST of mRNA_S-firma_F_contig10762.1026.1 vs. uniprot
Match: A0A6H5K591_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K591_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 1.210e-27
Identity = 69/110 (62.73%), Postives = 85/110 (77.27%), Query Frame = 0 
Query:  104 DRSSSGSVASVSSGKSMCSVYSDGEEG--GWTGIEWDNLNAYTVAQLKEFLRRRLLPVSGKKEILVNRLLQAARDVGHLPQVPLSPAPTSPSGSDLSFSLRGRGTPAATA 211
            +R S GS AS SS  ++ SVYS+  EG  GW+GI++D+LN++T AQLK+FLRR  LPVSGKKE+L+NRL+QAARD GHLPQVP    P+SP+GSD SFSL G   PAA A
Sbjct:  404 ERLSCGSAASSSSRITVLSVYSEAGEGTDGWSGIDFDHLNSHTNAQLKDFLRRHNLPVSGKKEVLINRLVQAARDSGHLPQVP----PSSPAGSDFSFSLPGLDAPAAAA 509
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BLAST of mRNA_S-firma_F_contig10762.1026.1 vs. uniprot
Match: D8LMX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX1_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 2.460e-27
Identity = 67/108 (62.04%), Postives = 82/108 (75.93%), Query Frame = 0 
Query:  104 DRSSSGSVASVSSGKSMCSVYSDGEEG--GWTGIEWDNLNAYTVAQLKEFLRRRLLPVSGKKEILVNRLLQAARDVGHLPQVPLSPAPTSPSGSDLSFSLRGRGTPAA 209
            +R S GS AS SS  ++ SVYS+  EG  GW+GI+WD+L+ YT+ QLK+FLRR  LPVSGKK +L+NRL+QAARD GHLPQVP    P+SP+GSD SFSL G   PAA
Sbjct: 1132 ERLSCGSAASSSSRVTVLSVYSEDGEGTDGWSGIDWDHLHFYTIPQLKDFLRRHHLPVSGKKGVLINRLVQAARDSGHLPQVP----PSSPAGSDFSFSLPGLDAPAA 1235
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10762.1026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K591_9PHAE1.210e-2762.73SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMX1_ECTSI2.460e-2762.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 140..174
e-value: 9.0E-4
score: 28.5
IPR003034SAP domainPFAMPF02037SAPcoord: 140..173
e-value: 1.4E-9
score: 37.5
IPR003034SAP domainPROSITEPS50800SAPcoord: 140..174
score: 9.946
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 138..177
e-value: 1.5E-10
score: 42.5
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 138..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10762contigS-firma_F_contig10762:3433..4781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10762.1026.1mRNA_S-firma_F_contig10762.1026.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10762 3433..4781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10762.1026.1 ID=prot_S-firma_F_contig10762.1026.1|Name=mRNA_S-firma_F_contig10762.1026.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=227bp
VTCAKGEQTEEKEEEEEEAGGRFEQGERSFIVISDTEEEEEEDDDDDDDD
DEEWLPDALVASKKRSSSNRGVKGRYDDPGPAGGGSSSTGRGGRTSGDGG
GKSDRSSSGSVASVSSGKSMCSVYSDGEEGGWTGIEWDNLNAYTVAQLKE
FLRRRLLPVSGKKEILVNRLLQAARDVGHLPQVPLSPAPTSPSGSDLSFS
LRGRGTPAATAAASVDGHGSRTEEAKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036361SAP_dom_sf
IPR003034SAP_dom