prot_S-firma_F_contig10746.1008.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10746.1008.1
Unique Nameprot_S-firma_F_contig10746.1008.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length539
Homology
BLAST of mRNA_S-firma_F_contig10746.1008.1 vs. uniprot
Match: D7FHS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS7_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 1.830e-145
Identity = 321/544 (59.01%), Postives = 351/544 (64.52%), Query Frame = 0
Query:    1 DFGHIGVSTSRRSNMDPPMSPRSTEHQRYAMGSVVRDGVWFHNSPSSALETAPGPGEYSPSIISNGYERGNTAKPSSGTAGRQAWDLRGSAGGAPLSNFRDGFTVSSSMGTTPRMAEWAQVSLHDGVLLLRGANDGHRSNGIGPGEYDGSNNRQDPMIKRSYNMRAQNSQVHRERSLSFSGTSSSARAFLSLASASSR--PTSTN-EAARGRPDLHLLGGMGRSPSPSLPAGERRCVSPASALLSSTRVRAAAAAARGGSTFGMRTGGARTTPTSSRSLSPRRNRSRSGSPIRGARGGLHGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARGCRSLSPRSFGGGGRVTARGASXXPXXXXXXXXXXXXXAAAGTLSAPSSPRGNRNRISSRKTAGDKHRSXXXXXXXXXXX-SDG-YTFDYFGLAGQRGAWRGLEGVAAARAEVGIETPKQGQ-GQNATNTTNGTNLRGGFDGQGAXXXXXXXXXXXEAXXGGGNGAVVXXXXPGSLLPEGAPAKGVCSPPKETRDDLHT 538
            DFGHIGVSTSRRSNMDPP+SPRSTEHQR+A GSVVRDGVWFH  PS  L   PGPG YSPSIIS+ +ERG TAKPSSG  GRQAWDLRGSAGG PLSNFR+GF+VSSSMGTTPRM ++AQV+L DGVLLLR ANDGHRSNGIGPGEY G +N QDPM KRSYNMRAQ+SQ+ RERSLSFSGTSS+A+AFLSLAS+ +R  PT +N EAA  RPDLHLLG     P+P    G                        RGG       G  R T T SRSLSP+ NR RSG  IRGA GG +G                     XXXXXXXXXXX          +R CRSLSPR    GGR    G +  P             A + ++SAPSSPR +R               XXXXXXXXXXX SD  YTFDYFGLAGQRG WRGLE V+AARAEVGIE  K    G N+    + T  RGG + Q A  XXXXXXXXX  XX     A      PGSLLPE  PAKGVCSPPKETRDDLHT
Sbjct:   46 DFGHIGVSTSRRSNMDPPLSPRSTEHQRHATGSVVRDGVWFH--PSPFLAAGPGPGAYSPSIISSDHERGRTAKPSSGAVGRQAWDLRGSAGGTPLSNFRNGFSVSSSMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTAPTRSNKEAASCRPDLHLLG-RNTYPAPGGVGG------------------------RGGDGRSTSPGKERRTDTGSRSLSPKANRGRSGFAIRGAAGGRYGRGDGIGGVGHGPATFHPISQQXXXXXXXXXXXRQARTTSSGASRECRSLSPRGRDSGGRPVGGGRASPPLRAEHGSSRRKN-ATSVSISAPSSPRNSRXXXXXXXXXXXXXXXXXXXXXXXXXXXSDASYTFDYFGLAGQRGVWRGLEAVSAARAEVGIEATKDNDDGHNSNKQASATGSRGGNEAQSAAGXXXXXXXXXXXXX--XXXARGRRGEPGSLLPERVPAKGVCSPPKETRDDLHT 559          
BLAST of mRNA_S-firma_F_contig10746.1008.1 vs. uniprot
Match: A0A6H5JYF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF7_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 1.680e-70
Identity = 214/461 (46.42%), Postives = 247/461 (53.58%), Query Frame = 0
Query:  109 MGTTPRMAEWAQVSLHDGVLLLRGANDGHRSNGIGPGEYDGSNNRQDPMIKRSYNMRAQNSQVHRERSLSFSGTSSSARAFLSLASASSR--PTSTN-EAARGRPDLHLL-----------GGMGRSPSPSLPAGERRCVSPASALLSSTRVRAAAAAARGGS--TFGMRTGGAR-----TTPTSSRSLSPRRNRSRSGSPIRGARGGLHGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARGCRSLSPRSFGG----GGRVTAR---GASXXPXXXXXXXXXXXXXAAAGTLSAPSSPRGNRNRISSRK---TAGDKHRSXXXXXXXXXXXSDGYTFDYFGLAGQRGAWRGLEGVAAARAEVGIETPKQGQGQNATNTTNGTNLRGGFDGQGAXXXXXXXXXXXEAXXGGGNGAVVXXXXPGSLLPEGAPAKGVCSPPKETRDDLHT 538
            MGTTPRM ++AQV+L DGVLLLR ANDGHRSNGIGPGEY G +N QDPM KRSYNMRAQ+SQV RERSLSFSGTSS+A+AFLSLAS+ +R  PT +N EAA  RPDLHLL           GG G     + P  ERRCVSPASA+LSS R RAAAAA   G+  TFG+R+GG R       P +  +   RR  +  GS   G   G                                             A  C  ++  + GG    GGR +     GA+  P              +  ++SAPSSPR +R R +++K   T G    +              YTFDYFGLAGQRG WRGLE ++AARAEVGIE  K                         XXXXXXXXXXX  XX     A      PGSLLPE APAKGVCSPPKETRDDLHT
Sbjct:    1 MGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQVRRERSLSFSGTSSTAKAFLSLASSMARTNPTRSNKEAASCRPDLHLLTRNTYPAPGGVGGRGGDGRSTFPGKERRCVSPASAMLSSLRGRAAAAANGNGAAATFGLRSGGMRFFIVHLWPMAPAASLRRRTAAAPGSQSAGPPVGATAAAMTSVASAAVPSLFTLFLSSSSSSRGAVARHGRQAAGRAGGAVPCHRMAVTAAGGRSAAGGRCSLGQPVGAASPPLRAEPGSSRRKNTTSV-SISAPSSPRNSR-RSTAKKYAPTTGGITGAVVGGRGGSNGSDASYTFDYFGLAGQRGVWRGLESISAARAEVGIEATKDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXAKGRRGGPGSLLPERAPAKGVCSPPKETRDDLHT 457          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10746.1008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHS7_ECTSI1.830e-14559.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYF7_9PHAE1.680e-7046.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10746contigS-firma_F_contig10746:116..5050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10746.1008.1mRNA_S-firma_F_contig10746.1008.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10746 116..5050 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10746.1008.1 ID=prot_S-firma_F_contig10746.1008.1|Name=mRNA_S-firma_F_contig10746.1008.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=539bp
DFGHIGVSTSRRSNMDPPMSPRSTEHQRYAMGSVVRDGVWFHNSPSSALE
TAPGPGEYSPSIISNGYERGNTAKPSSGTAGRQAWDLRGSAGGAPLSNFR
DGFTVSSSMGTTPRMAEWAQVSLHDGVLLLRGANDGHRSNGIGPGEYDGS
NNRQDPMIKRSYNMRAQNSQVHRERSLSFSGTSSSARAFLSLASASSRPT
STNEAARGRPDLHLLGGMGRSPSPSLPAGERRCVSPASALLSSTRVRAAA
AAARGGSTFGMRTGGARTTPTSSRSLSPRRNRSRSGSPIRGARGGLHGNG
SGGGGGGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGTARGCRSLSPR
SFGGGGRVTARGASSSPRAASSLSPRRQQKAAAGTLSAPSSPRGNRNRIS
SRKTAGDKHRSGGGGGGGGGGGSDGYTFDYFGLAGQRGAWRGLEGVAAAR
AEVGIETPKQGQGQNATNTTNGTNLRGGFDGQGAGGGDAAKGGPSEAGGG
GGNGAVVGGGGPGSLLPEGAPAKGVCSPPKETRDDLHT*
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