prot_S-firma_F_contig10711.965.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10711.965.1
Unique Nameprot_S-firma_F_contig10711.965.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length520
Homology
BLAST of mRNA_S-firma_F_contig10711.965.1 vs. uniprot
Match: A0A6H5KBP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP4_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 2.900e-14
Identity = 141/339 (41.59%), Postives = 173/339 (51.03%), Query Frame = 0
Query:    1 MSRILTGRSENAIKNRFNSLNAKGLAETRANELMAKLAPEEKAEFMLKDVDRVPVAKTATSKASAASKPRAPSKRPSSSASKPVLSRYGDNSR-------ARRNAGDAGNPSSKDVDRFGSGXXXXXXDRSGRIVKEDESVSSAMGFYGSXXXXXXXGESDDG--DYHQYDARVGRSFSGGVGGSEDGXXXXXXXXXXXXXXXXXXXXXXXXALQALMVAAVAAGDDRAVGPGSYGGVGCEDDESDEADGNGRRGAWAGAGGKRGRSPMTDGXXXXXXXXWRRWEGEVEDGGI--PDNRGAKREKGGLSRRKPEMARAEAGMSVLAQAAGLLDIQDSVE 328
            MS+IL GRSENAIKNRFNSLNAKGLAE RANELM+KLAPEEKA  +  ++D  P+A      +S+A+K +A +        K                  ++   GD      +   + GSG  XXXX                      XXXXXXX    DG  D  +  +    +   G       XXXXXXXXXXXXXXXX        A++ALMVA  A G+  A G    G  G +  +        R GA AGA  KRG +P+  G         +   G    G +  P  + AKR KGG +RRK ++ARAEAGMSVLAQAAGLLDI+DSVE
Sbjct:    1 MSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALL--NIDSDPLAPPRPCSSSSATKKKAGANSTHVGKEKXXXXXXXXXXXXXXXXXXSKVKGGDVDGTGGRS--KVGSGRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGRDDRTRKGSNASSATGFGTAAGXXXXXXXXXXXXXXXXXXXDAGFGRSAAMEALMVA--ARGERTACG--GSGDEGHDGGDPWNTSNCKRDGAEAGARWKRGWTPV--GGEGAERRGRQETAGGSGGGAVAEPGRKAAKRPKGGQARRKTDIARAEAGMSVLAQAAGLLDIEDSVE 329          
BLAST of mRNA_S-firma_F_contig10711.965.1 vs. uniprot
Match: D7FZ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ02_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.140e-10
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 MSRILTGRSENAIKNRFNSLNAKGLAETRANELMAKLAPEEKAEFMLKDVD 51
            MS+IL GRSENAIKNRFNSLNAKGLAE RANELM+KLAPEEKA  +  D D
Sbjct:  142 MSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSD 192          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10711.965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBP4_9PHAE2.900e-1441.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ02_ECTSI1.140e-1080.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10711contigS-firma_F_contig10711:1745..3934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10711.965.1mRNA_S-firma_F_contig10711.965.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10711 620..4696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10711.965.1 ID=prot_S-firma_F_contig10711.965.1|Name=mRNA_S-firma_F_contig10711.965.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=520bp
MSRILTGRSENAIKNRFNSLNAKGLAETRANELMAKLAPEEKAEFMLKDV
DRVPVAKTATSKASAASKPRAPSKRPSSSASKPVLSRYGDNSRARRNAGD
AGNPSSKDVDRFGSGGGGGGGDRSGRIVKEDESVSSAMGFYGSGGGGGGE
GESDDGDYHQYDARVGRSFSGGVGGSEDGGGGGSGGGSGSGGGGGGTTGS
GSGALQALMVAAVAAGDDRAVGPGSYGGVGCEDDESDEADGNGRRGAWAG
AGGKRGRSPMTDGGGGGGGGGWRRWEGEVEDGGIPDNRGAKREKGGLSRR
KPEMARAEAGMSVLAQAAGLLDIQDSVEEDGSGSVRSYSDNSSSNESFPR
PPYGRLPGAYRYHAGGVPDHGSTPPGSASPPPSGGSAGGMTAAAAGDVAA
AFGGGGSGQAYASAFALGAGDTVRTGDQGYRDSSSSGGDKGDGAGGAVAG
GGGGPPLQRPGWIVGPGGVQQRRSLQSVPGPWRPYWKDSSSGSEDCVGAA
AAALRQHEDIKRGAGDQEA*
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