prot_S-firma_F_contig10704.957.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10704.957.1
Unique Nameprot_S-firma_F_contig10704.957.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length772
Homology
BLAST of mRNA_S-firma_F_contig10704.957.1 vs. uniprot
Match: D7FUX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX0_ECTSI)

HSP 1 Score: 507 bits (1306), Expect = 1.210e-163
Identity = 348/686 (50.73%), Postives = 423/686 (61.66%), Query Frame = 0
Query:   97 ATRYVPGCVFREELKGWFDKLSKREQDAVDRLKLGLEHWDLKMMDKCIAQLRLLELPELVKEFQKKREDVRSKRWRLREELKVRENWNSKESNTSRLWKACVEAETFFAAKKMKEYQSAKLCLENACAAELEIKARRILAAKGIVADPRCNVRQDLACGPRLLLREDPVDAGVVGGGGGGTRLFVGADASNSLTASPGVSRRLALLSEGENGEPCHPRDAASSGVTGGDLMG-GAHNCGSPLADDGDAEGGRDTSEHTAATASAAGVTVSGNSDSAPWGQPPGRGDTRGGEMMQLCQLRVWELMEARQRSAKEAFQECVTKQEDERRRAKDRHQAALKARDADETHRQECIARLDTRGVIEDKRLKMEMDRLMKEELRREEEXAKRKRRADADRLKQLWSSDGDFFSLLSAADVALAAATAAFRKGFSLAPGAVLNATWGLVVAECAEEGVGGAGTAAGASGAAPHLCTS---SAAVDVSDLEHGLAGS---DGVCG-GAGGTWSEAAAARSSGEGSESALWWAVSAAGSTAGAVLRAAYASAGWLLGQTLGLDTPHVQCEIRVVLSLYAWLVSLVLVMKLVRGLL-GPGNGGGAA--VQWILLAAWVWGRFHDWVLHASQELVLLFAPAPALVLAYGRALRCFEKHRRPDGFWWANGLDVRFFWSRALPAIVSGVLACILGSQVS 771
            A R    CVFREEL  W D+L++REQ+AVD LKLGLE WDL+M D+ +AQLRLLELPE+V+EF+KKREDVR KRWRL++ELK  E   +KE N SRL  ACV+AETF + + + EY+ AK  LENA AA LE+KARRIL+  GI ADPRCNVR D A GP LLLR+ P    +V  GG G  LF GAD     TASP V RRL L S        HP  A  +G      M     NCG     +G   G    S      A A  V V GNSD A W +      + GG   QL + R  EL+ A +RSA+  F  CVTK E+E RRA +R  ++LKARDA+E++RQ  IARLD R V ED RL ME  RL          X            + L + DGDF+  LSA +V LAAA AA++KG SLAPGA+L+A W L+VAECA+ G          +GA P  C +   +AA   + LE G AG+   +G CG G               +GSESALWWA+S AGSTAGAV+RA Y+S GWLLGQTLG  TP V+CE+R V SL AWL+SL L  K+V GLL GPG GG A   ++W+LLA WVW RF  WV+ A++ ++LL APAPALVLAYG  +   E+HR+PDG WW  G DVR  W R LPA+V+  LA  LG + S
Sbjct:  299 ARRTDSRCVFREELARWCDRLAEREQEAVDWLKLGLETWDLEMADRALAQLRLLELPEIVQEFEKKREDVRGKRWRLQQELKTAEEL-AKEGNPSRLRNACVKAETF-SCEDLDEYRPAKRSLENAHAARLEVKARRILSIYGIPADPRCNVRLDSAGGPALLLRDVPR---LVDDGGAG--LFTGAD-----TASPSVGRRLVLDSVKREAGEKHPSGAPDNGDASDRRMDVSEENCG--RGGNGVVRGEFSCSPRRQPPADAPAVGVDGNSDVATWAR-----SSAGGGETQLSR-RQQELVVAARRSAETDFMACVTKLEEEHRRACEREASSLKARDAEESYRQAYIARLDERSVREDARLVMEKKRLQXXXXXXXXXXXXXXXXXXXXXREGLQARDGDFWLALSAFEVCLAAAAAAYKKGISLAPGAILDAAWRLLVAECADGGXXXVVV----TGAMPPFCQNPFGAAAPAATSLEGGTAGALDNNGECGAGXXXXXXXXXXXXXPSDGSESALWWALSYAGSTAGAVVRAGYSSGGWLLGQTLGRVTPGVRCEVRAVFSLVAWLLSLALAQKIVGGLLLGPGGGGPATGVLRWLLLAVWVWARFQGWVVSAARGMLLLLAPAPALVLAYGLVMGYVERHRKPDGCWWVRGWDVRPVWFRVLPAVVASGLAWFLGGRAS 960          
BLAST of mRNA_S-firma_F_contig10704.957.1 vs. uniprot
Match: A0A6H5L440_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L440_9PHAE)

HSP 1 Score: 503 bits (1295), Expect = 2.440e-162
Identity = 349/729 (47.87%), Postives = 433/729 (59.40%), Query Frame = 0
Query:   71 LSTRARLLLKRRSNGGGDSSVSGDKSATRYVPG-CVFREELKGWFDKLSKREQDAVDRLKLGLEHWDLKMMDKCIAQLRLLELPELVKEFQKKREDVRSKRWRLREELKVRENWNSKESNTSRLWKACVEAETFFAAKKMKEYQSAKLCLENACAAELEIKARRILAAKGIVADPRCNVRQDLACGPRLLLREDPVDAGVVGGGGGGTRLFVGADASNSLTASPGVSRRLALLSEGENGEPCHPRDAASS---------------GVTGGDLMGGAHNCGSPLADDGDAEGGRDTSEHTAATASAAGVTVSGNSDSAPWGQPPGRGDTRGGEMMQLCQLRVWELMEARQRSAKEAFQECVTKQEDERRRAKDRHQAALKARDADETHRQECIARLDTRGVIEDKRLKMEMDRLMKEELRREEEXAKRKRRADADRLKQLWSSDGDFFSLLSAADVALAAATAAFRKGFSLAPGAVLNATWGLVVAECAE-EGVGGAGTAAGASGAAPHLCTS---SAAVDVSDLEHGLAG-----SDGVCGGAGGTWSEAAAARSSGEGSESALWWAVSAAGSTAGAVLRAAYASAGWLLGQTLGLDTPHVQCEIRVVLSLYAWLVSLVLVMKLVRGLL-GPGNGGGAA--VQWILLAAWVWGRFHDWVLHASQELVLLFAPAPALVLAYGRALRCFEKHRRPDGFWWANGLDVRFFWSRALPAIVSGVLACILGSQVS 771
            LSTRA LLL  R +G  D+   G  +  R     CVFREEL  W D+L++REQ+AVD LKLGLE WDL+M D+ +AQLRLLELPE+V+EF+KKREDVR KRWRL++ELK  E  ++KE N SRL  ACV+AETF + + + EY+ AK  LENA AA LE++ARRIL+  GI ADPRCNVR D A GP LLLR+ P  A       GG  LF+GADA     ASP V RRL L S  +     HPR A                  G  G  ++GG  +C  P     DA                  V V+G+ D A W +      + GG   QL + R  EL+ A +RSA+  F   VTK E+E RRA +R  ++LKARDA+E++RQ  IARLD R V ED RL ME  RL          X            ++L + DG F+  LSA +V LAAA AA++KG +LAPGA+L+A WGL+VAECA+             +GA P  C +   +AA   + LE G AG                       RS  +GSESALWWA+S AGSTAGAV+RA Y+S GWLLGQTLGL TP V+CE+R VLSL AWL+SL L  K+V GLL GPG GG A   ++W+LLA WVW RF  WV+ A++ ++LL AP PALVLAYG  +   E+HR+PDG WW  G DVR  W R LP +V+  LA  LG + S
Sbjct:  240 LSTRAALLLSWRPSGSNDNGGEGGGTTARRADSRCVFREELARWCDRLAEREQEAVDWLKLGLETWDLEMADRALAQLRLLELPEIVQEFEKKREDVRGKRWRLQQELKAAEE-SAKEGNPSRLRNACVKAETF-SCEDLDEYRPAKRSLENAHAARLEVQARRILSIYGIPADPRCNVRLDSAGGPALLLRDVPRLAD-----DGGAGLFIGADA-----ASPSVGRRLVLDSVKQEAGEKHPRGAPDDDDASDRRMDVSEETCGREGNGVVGGEFSCSPPWQPPADAPA----------------VGVNGSGDVATWAR-----SSAGGGETQLSR-RQQELVLAARRSAETDFMAYVTKLEEEHRRACEREASSLKARDAEESYRQAYIARLDERSVREDARLVMEKKRLQDXXXXXXXXXXXXXXXXXXXXXQELQARDGGFWLALSAFEVCLAAAGAAYKKGINLAPGAILDAAWGLLVAECADGXXXXXXXXXVAVTGAVPPFCENPFGAAAPAATPLEGGAAGVLDXXXXXXXXXXXXXXXXXXXXRS--DGSESALWWALSYAGSTAGAVVRAGYSSGGWLLGQTLGLVTPDVRCEVRAVLSLVAWLLSLALAQKIVGGLLLGPGGGGPATGVLRWLLLAVWVWARFQGWVVSAARGMLLLLAPVPALVLAYGLVMGYVERHRKPDGCWWVRGWDVRPVWFRVLPTVVASGLAWFLGGRAS 932          
BLAST of mRNA_S-firma_F_contig10704.957.1 vs. uniprot
Match: D7FU79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU79_ECTSI)

HSP 1 Score: 428 bits (1100), Expect = 2.640e-133
Identity = 341/795 (42.89%), Postives = 434/795 (54.59%), Query Frame = 0
Query:    1 MAEVEQLDRLLSRLESGGGGVLDGDGLSSGEDGDGALENQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTRARLLLKRRSNGGGDSSVSGDKSATRYVPGCVFREELKGWFDKLSKREQDAVDRLKLGLEHWDLKMMDKCIAQLRLLELPELVKEFQKKREDVRSKRWRLREELKVRENWNSKESNTSRLWKACVEAETFFAAKKMKEYQSAKLCLENACAAELEIKARRILAAKGIVADPRCNVRQDLACGPRLLLREDPVDAGVVGGGGGGTRLFV-GADASNSLTASPGVSRRLALLSEGENGEPCHPRDAASSGVTGGDLMGGAHNCGSPLA------DDGDAEGGRDTS-----------EHTAATASAAGVTVSGNSDSAPWGQPPGRGDTRGGEMMQLCQLRVWELMEARQRSAKEAFQECVTKQEDERRRAKDRHQAALKARDADETHRQECIARLDTRGVIEDKRLKMEMDRLMKEELRREEEXAKRKRRADADRLKQLWSSDGDFFSLLSAADVALAAATAAFRKGFSLAPGAVLNATWGLVVAECAEEGVGGAGTAAGASGAAPHLCTSSAAVDVSDLEHGLAGS-----DGVCGGA---GGTWSEAAAARSSGEGSESALWWAVSAAGSTAGAVLRAAYASAGWLLGQTLGLDTPHVQCEIRVVLSLYAWLVSLVLVMKLVRGLLGPGNGGGAAVQWILLAAWVWGRFHDWVLHASQELVLLFAPAPALVLAYGRALRCFEKHRRPDGFWWANGLDVRFFWSRALPAIVSGVLACILGSQ 769
            MAE+EQL   L RL S GGGV     LS+G +G  AL+++S                             LS+RA   L RRS+G  DS  SG+ +      GCVFREEL  W D+L+ RE++A D  KLGL+ WDL M D+ I QLRLL+ PE V EFQ+KRE VR  RW + EELK    + +KE + S L KACV+AETF + + + EYQ+AK  L+NA AA+LE +ARRIL+  GI A PRCNVR D A GP LLLR+   +  +  GG GG+ L   GAD     TA+P + RR             H  D+       GD  GGA + G  +A      D  D   GR                   T++A  V  S  SD A W +P G G   GGE +   Q    EL+  R RSA+  F+  VTK +++ +RA ++  + LKA  A+E++RQ   +RLD R  +E  ++ MEM R+  EE  R  E    KRR D  RL++L + DGDF+  LSA +V L AA AA+ KG  L P  VL+A   ++VAECA+ GVG                       V  LE G  G+     DG CG     GG W +AA      +GSE ALWWA+S AGSTAGAV+RA Y+S  WLLG+TLGL  P V+CE R V +L A L  L L  ++V GLLG G     A +W LL AWVW RF   VL A  EL++L AP PALV+AYG  L   E++R+P G WW  G DVR  W R LP +VS  LA  LG++
Sbjct:  232 MAEIEQL---LDRLASDGGGVRSARDLSAGGNGGEALDDRSEINDGGRGVIPHRAR--------------LSSRAASPLSRRSSGRSDSH-SGENT------GCVFREELTQWCDRLAVREKEAEDWFKLGLKIWDLNMADRGIEQLRLLQRPETVHEFQEKREIVRHNRWEVEEELKKAVKF-AKEGDPSTLRKACVKAETF-SGESLDEYQTAKQLLKNAQAAQLEKEARRILSNHGIFAHPRCNVRFDSASGPALLLRDVSGEEKLGDGGDGGSGLEEPGADCGG--TAAPCMCRR-------------HVLDSVKQEA--GDHRGGAPDFGGVIARKHRRVDRADESCGRQEEGVARVKCSCSLRRQPMTSAAPAVEGSVGSDVATWARPSG-GAVAGGETLLSRQE---ELLVVR-RSAETEFKTHVTKLQEDHKRACEKEASRLKAWYAEESYRQAYFSRLDERSFLEASKIAMEMKRMQDEEAHRRREEVDAKRRRDDRRLEKLQARDGDFWLALSALEVCLVAAVAAYNKG--LTPRVVLDAAREVLVAECADGGVG----------------------VVVTLEGGTTGALEGYDDGACGARDADGGWWRDAA------DGSEGALWWALSYAGSTAGAVVRAGYSSGRWLLGKTLGLVIPDVRCEARTVFALVASLFFLALASRIVGGLLGSGRAHVVARRW-LLVAWVWARFQGSVLRAVWELLMLLAPTPALVMAYGYVLGYVERYRKPGGRWWVRGRDVRPVWFRVLPTVVSSALAWFLGAR 947          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10704.957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUX0_ECTSI1.210e-16350.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L440_9PHAE2.440e-16247.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU79_ECTSI2.640e-13342.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 460..489
NoneNo IPR availableCOILSCoilCoilcoord: 156..176
NoneNo IPR availableCOILSCoilCoilcoord: 414..434
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 749..770
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 652..670
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 671..676
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..651
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 730..748
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 709..729
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 677..697
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 698..708
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 771..771
NoneNo IPR availableTMHMMTMhelixcoord: 704..726
NoneNo IPR availableTMHMMTMhelixcoord: 672..694
NoneNo IPR availableTMHMMTMhelixcoord: 650..667
NoneNo IPR availableTMHMMTMhelixcoord: 748..770

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10704contigS-firma_F_contig10704:442..3148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10704.957.1mRNA_S-firma_F_contig10704.957.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10704 1..3695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10704.957.1 ID=prot_S-firma_F_contig10704.957.1|Name=mRNA_S-firma_F_contig10704.957.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=772bp
MAEVEQLDRLLSRLESGGGGVLDGDGLSSGEDGDGALENQSDSDSSDSDM
GLSGGNGSAAQEQRRKRRARLSTRARLLLKRRSNGGGDSSVSGDKSATRY
VPGCVFREELKGWFDKLSKREQDAVDRLKLGLEHWDLKMMDKCIAQLRLL
ELPELVKEFQKKREDVRSKRWRLREELKVRENWNSKESNTSRLWKACVEA
ETFFAAKKMKEYQSAKLCLENACAAELEIKARRILAAKGIVADPRCNVRQ
DLACGPRLLLREDPVDAGVVGGGGGGTRLFVGADASNSLTASPGVSRRLA
LLSEGENGEPCHPRDAASSGVTGGDLMGGAHNCGSPLADDGDAEGGRDTS
EHTAATASAAGVTVSGNSDSAPWGQPPGRGDTRGGEMMQLCQLRVWELME
ARQRSAKEAFQECVTKQEDERRRAKDRHQAALKARDADETHRQECIARLD
TRGVIEDKRLKMEMDRLMKEELRREEEEAKRKRRADADRLKQLWSSDGDF
FSLLSAADVALAAATAAFRKGFSLAPGAVLNATWGLVVAECAEEGVGGAG
TAAGASGAAPHLCTSSAAVDVSDLEHGLAGSDGVCGGAGGTWSEAAAARS
SGEGSESALWWAVSAAGSTAGAVLRAAYASAGWLLGQTLGLDTPHVQCEI
RVVLSLYAWLVSLVLVMKLVRGLLGPGNGGGAAVQWILLAAWVWGRFHDW
VLHASQELVLLFAPAPALVLAYGRALRCFEKHRRPDGFWWANGLDVRFFW
SRALPAIVSGVLACILGSQVS*
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