prot_S-firma_F_contig1070.950.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1070.950.1
Unique Nameprot_S-firma_F_contig1070.950.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length104
Homology
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 8.600e-10
Identity = 35/61 (57.38%), Postives = 39/61 (63.93%), Query Frame = 0
Query:   50 LYTLKPHPLE---------VFSTFQGKYAEAEPLFERSLAIREKVLGPEHQDVAGGLDKVA 101
            L  + PH L          VF TFQGKY EA PL+ERSLAIREKVLGP+H DVA  L+  A
Sbjct:  774 LSNVPPHSLSSFHSSNTHHVFITFQGKYEEAGPLYERSLAIREKVLGPDHPDVAQSLNNRA 834          
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 2.200e-9
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   65 QGKYAEAEPLFERSLAIREKVLGPEHQDVAGGLDKVAQF 103
            QGKYAEAEPL+ERSLAI+EKVLGPEH DVA  LD  A  
Sbjct:  693 QGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASL 731          
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: A0A6H5KB97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB97_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 9.740e-9
Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   54 KPHPLEVFSTFQGKYAEAEPLFERSLAIREKVLGPEHQDVAGGLDKVA 101
            K H LEV    QGKYAEAEPL+ERS AIRE VLGPEH DV   L+ +A
Sbjct:  337 KAHLLEV----QGKYAEAEPLYERSQAIRENVLGPEHSDVGRSLNNLA 380          
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: A0A351SVW6_9DELT (CHAT domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A351SVW6_9DELT)

HSP 1 Score: 60.1 bits (144), Expect = 2.570e-8
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0
Query:   65 QGKYAEAEPLFERSLAIREKVLGPEHQDVA 94
            QGKYAEAEPLF RSLAIREKVLGPEHQ+VA
Sbjct:   15 QGKYAEAEPLFRRSLAIREKVLGPEHQNVA 44          
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 8.720e-8
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0
Query:   65 QGKYAEAEPLFERSLAIREKVLGPEHQDVAGGLD 98
            QGKYAEAEPL+ERS AIREK+LGPEH DVA  L+
Sbjct:  291 QGKYAEAEPLYERSQAIREKMLGPEHPDVAQSLN 324          
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: A0A6H5K8Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z8_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.530e-7
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
Query:   65 QGKYAEAEPLFERSLAIREKVLGPEHQDVAGGLD 98
            QGKY +AE L+ERSLAIREKVLGPEH DVA  L+
Sbjct:   16 QGKYDDAEQLYERSLAIREKVLGPEHPDVAQSLN 49          
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: A0A533TP31_CHLSQ (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Chlorobium sp. TaxID=1095 RepID=A0A533TP31_CHLSQ)

HSP 1 Score: 57.0 bits (136), Expect = 2.460e-7
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0
Query:   66 GKYAEAEPLFERSLAIREKVLGPEHQDVAGGLD 98
            GKYAEAEPLF RSL IREK LGP+H DVA GL+
Sbjct:  230 GKYAEAEPLFRRSLEIREKALGPDHPDVATGLN 262          
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.830e-7
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 0
Query:   65 QGKYAEAEPLFERSLAIREKVLGPEHQDVAGGLD 98
            QGKY EAEPL+ERS AI+EKVLG EH DVA  L+
Sbjct:   18 QGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLN 51          
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: A0A1F4GZ05_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4GZ05_9PROT)

HSP 1 Score: 56.2 bits (134), Expect = 4.250e-7
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   65 QGKYAEAEPLFERSLAIREKVLGPEHQDVAGGLDKVA 101
            QG+YA+AEP++ RSLAI EKVLGPEH DVA  L+ +A
Sbjct:   77 QGRYADAEPMYRRSLAIYEKVLGPEHLDVADSLNNLA 113          
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Match: A0A0J9EWN6_9CYAN (Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0J9EWN6_9CYAN)

HSP 1 Score: 56.2 bits (134), Expect = 4.800e-7
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0
Query:   65 QGKYAEAEPLFERSLAIREKVLGPEHQDVAGGLDKVAQF 103
            QG+Y EAEPL++RSLAIREKVLG  H DVA  L+ +A F
Sbjct:   19 QGRYNEAEPLYQRSLAIREKVLGENHPDVALSLNNLASF 57          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1070.950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJK0_9PHAE8.600e-1057.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G722_ECTSI2.200e-976.92NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KB97_9PHAE9.740e-966.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A351SVW6_9DELT2.570e-893.33CHAT domain-containing protein n=1 Tax=Deltaproteo... [more]
A0A6H5KIY6_9PHAE8.720e-879.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Z8_9PHAE1.530e-776.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A533TP31_CHLSQ2.460e-778.79Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
A0A6H5K3K8_9PHAE2.830e-773.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1F4GZ05_9PROT4.250e-767.57Uncharacterized protein n=2 Tax=unclassified Betap... [more]
A0A0J9EWN6_9CYAN4.800e-766.67Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 58..103
e-value: 8.4E-11
score: 43.4
NoneNo IPR availablePFAMPF13374TPR_10coord: 64..92
e-value: 1.1E-8
score: 34.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1070contigS-firma_F_contig1070:7702..8013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1070.950.1mRNA_S-firma_F_contig1070.950.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1070 7702..8027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1070.950.1 ID=prot_S-firma_F_contig1070.950.1|Name=mRNA_S-firma_F_contig1070.950.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=104bp
CRKIRCESNSSTVLAHVLFAKGQQFPVICAHVHHNGDRLRIYTHEEEINL
YTLKPHPLEVFSTFQGKYAEAEPLFERSLAIREKVLGPEHQDVAGGLDKV
AQF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf