prot_S-firma_F_contig10699.938.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10699.938.1
Unique Nameprot_S-firma_F_contig10699.938.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length72
Homology
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BLAST of mRNA_S-firma_F_contig10699.938.1 vs. uniprot
Match: D8LNC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC6_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.130e-6
Identity = 33/69 (47.83%), Postives = 40/69 (57.97%), Query Frame = 0 
Query:    1 MEGNAVDGETFGDAAGKAELPREGDDGSAMMMXXXXXGAAAGAGDVSDSLPEFFNTKGTSGDQEFSRCV 69
            MEG   D ETFG      E  R GD+ +A MM          AG ++D+LP+FFN KGTSGDQEFS  +
Sbjct:    1 MEGKDADDETFGGRRDGGEQER-GDNSNASMMMA--------AGGLNDNLPDFFNDKGTSGDQEFSSLM 60
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10699.938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNC6_ECTSI1.130e-647.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10699contigS-firma_F_contig10699:391..1180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10699.938.1mRNA_S-firma_F_contig10699.938.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10699 391..1248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10699.938.1 ID=prot_S-firma_F_contig10699.938.1|Name=mRNA_S-firma_F_contig10699.938.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=72bp
MEGNAVDGETFGDAAGKAELPREGDDGSAMMMTMMMMGAAAGAGDVSDSL
PEFFNTKGTSGDQEFSRCVCV*
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