prot_S-firma_F_contig10691.935.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10691.935.1
Unique Nameprot_S-firma_F_contig10691.935.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length158
Homology
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: D8LTZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ9_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 4.300e-77
Identity = 123/157 (78.34%), Postives = 134/157 (85.35%), Query Frame = 0
Query:    1 VAGLPLLVPFLAIVTVVGGIGALLAGAVWVFSRGGRAWVQGVVQPVYDKNLFVAWQRFFFQVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            VAGLPLLVP L +V  VGG+GALL  AVW+FSRGGRAWVQ  V+PVYD+       R   +VLYPVGPGPSPARIA+ LVPTGMW+KLAMSI VD IGCTSY VP+LGESAD+LWAP+SYLLIDAMYH SSPWAGVFGAMEELLPFTDIIPTATLAW
Sbjct:  230 VAGLPLLVPMLIVVAAVGGVGALLTAAVWLFSRGGRAWVQRAVRPVYDRV-----GRDNPEVLYPVGPGPSPARIAQCLVPTGMWSKLAMSIAVDTIGCTSYIVPILGESADLLWAPVSYLLIDAMYHGSSPWAGVFGAMEELLPFTDIIPTATLAW 381          
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: W7TYL2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYL2_9STRA)

HSP 1 Score: 133 bits (334), Expect = 8.550e-34
Identity = 73/156 (46.79%), Postives = 100/156 (64.10%), Query Frame = 0
Query:    3 GLPLLVPFLAIVTVVGGIGALLAGAVWVFS-RGGRAWVQGVVQPVYDKNLFVAWQRFFFQVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            GLP+ +P L ++ +V G+  L+A  +   S R GR  V+ +V PV  K    A  +   Q+LY  GP PSP RIA++  P G W +L  S+ +D IG +SY +PVLGE  D+ WAP+  + + AMY ++SP+A   G +EELLPFTDIIPTATLAW
Sbjct:  288 GLPVFLPLL-LLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQ---QLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAW 439          
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: A0A6U1M333_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M333_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.770e-31
Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 0
Query:   61 QVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            Q+LY  GP PS + +  +L+PT +W KL +S+ +D IG +SY +PVLGE  D LWAPM  +L+  MY DS PWA   G  EELLPFTDI+PTAT+AW
Sbjct:   11 QLLYCTGPCPSTSEVVLALMPTDVWVKLGLSLVIDTIGNSSYLLPVLGEVVDPLWAPMQMMLLYYMYGDSVPWAPYVGLTEELLPFTDIVPTATIAW 107          
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: A0A836CGD0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD0_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.060e-30
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0
Query:   61 QVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            +++Y  GP P+P ++ R + P   W KLA S+ VD IGCTSYA+PVLGE  DV WAP+S +LI AMY D  P+    G  EE+LPFTDIIPTA+LAW
Sbjct:  251 RIMYNTGPRPTPMQVLRYVAPKSKWPKLAASVAVDFIGCTSYALPVLGEVGDVAWAPLSAVLIAAMYDDKQPYMAYMGFAEEILPFTDIIPTASLAW 347          
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: B8C7V5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7V5_THAPS)

HSP 1 Score: 121 bits (304), Expect = 1.430e-29
Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 0
Query:    1 VAGLPLLVPFLAIVTVVGGIGALLAGAVWVFSRGGRAWVQGVVQPVYDKNLFVAWQRFFFQVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            + G+P  +P + I+            A++  +R GR  +Q V +P Y   L     +   +++Y VGP PSP  +A +++PT M  KL +S+ VD IG  SY +PVLGE  D+ WAPMS +L+ AMY D  P       +EELLPFTDI+P+ATL W
Sbjct:  284 IIGIPFFLPIVLIILAAAATIGAAGSALYFSTREGRTKIQHVAEPTYQTFLMTKTGQ---RIVYDVGPRPSPQSLAHAVLPTDMIGKLVVSLVVDFIGSASYLLPVLGEGFDLTWAPMSMILVGAMYDDVMPNLKYVALIEELLPFTDILPSATLGW 437          
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: A0A7S2VHH7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHH7_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.190e-29
Identity = 62/157 (39.49%), Postives = 93/157 (59.24%), Query Frame = 0
Query:    1 VAGLPLLVPFLAIVTVVGGIGALLAGAVWVFSRGGRAWVQGVVQPVYDKNLFVAWQRFFFQVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            + G+P  +P + IV  +G     +  +V+  +R GR  +Q V +P Y   L     +   +++Y VGP PSP  +A +++P+ M  KL +S+ +DAIG  SY +P+ GE  D+ WAPMS +L+ A+Y D  P       +EELLPFTD IP+ATL W
Sbjct:  260 IIGIPFFLPIILIVLTLGLSLGAIGSSVYFSTRSGRTRIQHVAEPSYQTFLMTKTGQ---RIIYDVGPRPSPQSLAHAVLPSDMIGKLIVSLVIDAIGSASYLIPLAGEGFDLTWAPMSMILVGALYDDVMPNLKYIALIEELLPFTDFIPSATLGW 413          
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: K0RA89_THAOC (Uncharacterized protein (Fragment) n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RA89_THAOC)

HSP 1 Score: 119 bits (298), Expect = 1.130e-28
Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 0
Query:    4 LPLLVPFLAIVTVVGGIGALLAGAVWVFSRGGRAWVQGVVQPVYDKNLFVAWQRFFFQVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            LP L+P L ++  +G I   + G ++  +R GR  +Q V +P Y   L     +   +++Y VGP PSP  +A +++P  M  KL  S+ VD +G  SY +P+ GE+ D+ WAP+S +L+ AMY D  P       MEELLP TD IP+ATL W
Sbjct:  298 LPFLLPVLMLLLTIGAISGAIGGGLYFSTREGRTRIQHVAEPSYQTFLMTKTGQ---RIVYDVGPRPSPQALAHAVLPQDMMGKLVASLLVDLVGSASYLIPLAGEAFDLTWAPVSMVLVGAMYDDVMPNLKYVALMEELLPLTDWIPSATLGW 448          
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: A0A7S4QJI5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QJI5_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.750e-27
Identity = 60/157 (38.22%), Postives = 99/157 (63.06%), Query Frame = 0
Query:    3 GLPLLVPFLAIVTVVGGIGALLAGAVWVFSRGGRAWV-QGVVQPVYDKNLFV-AWQRFFFQVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            GLP  +P LA +T +    +++   ++  +  GR  + Q ++ P+ +  L   A QR    ++Y +GP P+P  +A+S++PT +W+KL +S+ +D +G +SY +P+ GE+ D+ WAP+  +LI AMY D SP       +EE+LPFTD+IP+ATL W
Sbjct:  201 GLPFFLPLLAALTTIASALSVVVAILYFSTPQGRERLGQTLIYPLLNTVLHTPAGQR----LVYDIGPRPTPKSLAQSVLPTDIWSKLVVSLVIDFVGSSSYLIPIAGEALDLSWAPIQTILIAAMYDDVSPNLKYVSFVEEILPFTDVIPSATLGW 353          
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: A0A7S4HQ87_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HQ87_9STRA)

HSP 1 Score: 114 bits (284), Expect = 6.600e-27
Identity = 64/158 (40.51%), Postives = 92/158 (58.23%), Query Frame = 0
Query:    1 VAGLPLLVPFLAI-VTVVGGIGALLAGAVWVFSRGGRAWVQGVVQPVYDKNLFVAWQRFFFQVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            + GLP  +P L + +T    +GA+  G+++V +R GRA +   V PVY         + F   LY  GP PSP  +AR ++P  M  KL  S+ +D IG +SY +P++GE+ D+ WAP   +L+ AMY D SP        EE+LPFTD+IP+AT  W
Sbjct:  241 IIGLPFFLPLLVVLITFAASVGAIF-GSLYVSTRDGRAKIAPFVTPVYSTFASTPAGQSF---LYETGPRPSPVTLARCVLPDSMTGKLIASLLIDLIGSSSYLLPLVGEAFDLSWAPTQAVLVAAMYDDVSPSLKYVAFAEEILPFTDLIPSATYGW 394          
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Match: A0A7S4QI85_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QI85_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.090e-26
Identity = 60/157 (38.22%), Postives = 99/157 (63.06%), Query Frame = 0
Query:    3 GLPLLVPFLAIVTVVGGIGALLAGAVWVFSRGGRAWV-QGVVQPVYDKNLFV-AWQRFFFQVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCTSYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDIIPTATLAW 157
            GLP  +P LA +T +    +++   ++  +  GR  + Q ++ P+ +  L   A QR    ++Y +GP P+P  +A+S++PT +W+KL +S+ +D +G +SY +P+ GE+ D+ WAP+  +LI AMY D SP       +EE+LPFTD+IP+ATL W
Sbjct:  302 GLPFFLPLLAALTTIASALSVVVAILYFSTPQGRERLGQTLIYPLLNTVLHTPAGQR----LVYDIGPRPTPKSLAQSVLPTDIWSKLVVSLVIDFVGSSSYLIPIAGEALDLSWAPIQTILIAAMYDDVSPNLKYVSFVEEILPFTDVIPSATLGW 454          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10691.935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ9_ECTSI4.300e-7778.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TYL2_9STRA8.550e-3446.79Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6U1M333_9STRA2.770e-3155.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CGD0_9STRA4.060e-3056.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B8C7V5_THAPS1.430e-2940.76Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2VHH7_9STRA2.190e-2939.49Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
K0RA89_THAOC1.130e-2840.26Uncharacterized protein (Fragment) n=2 Tax=Thalass... [more]
A0A7S4QJI5_9STRA3.750e-2738.22Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4HQ87_9STRA6.600e-2740.51Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4QI85_9STRA1.090e-2638.22Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10691contigS-firma_F_contig10691:3244..4839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10691.935.1mRNA_S-firma_F_contig10691.935.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10691 3244..4839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10691.935.1 ID=prot_S-firma_F_contig10691.935.1|Name=mRNA_S-firma_F_contig10691.935.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=158bp
VAGLPLLVPFLAIVTVVGGIGALLAGAVWVFSRGGRAWVQGVVQPVYDKN
LFVAWQRFFFQVLYPVGPGPSPARIARSLVPTGMWAKLAMSITVDAIGCT
SYAVPVLGESADVLWAPMSYLLIDAMYHDSSPWAGVFGAMEELLPFTDII
PTATLAW*
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