prot_S-firma_F_contig10690.934.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10690.934.1
Unique Nameprot_S-firma_F_contig10690.934.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length106
Homology
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BLAST of mRNA_S-firma_F_contig10690.934.1 vs. uniprot
Match: D8LKD1_ECTSI (Aardvark n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD1_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.040e-10
Identity = 36/69 (52.17%), Postives = 42/69 (60.87%), Query Frame = 0 
Query:   33 HSRNASAEKVTVPPAAPXXXXXXXXXXKTAAAIGVVPTPPNNRPRSKAEQPIGALLEDFDSDGEGSYGP 101
            HSR +SAE   V    P               +G+ P PP NRP S+AEQP+GALLEDFDSDGEG+YGP
Sbjct:  534 HSRQSSAELTKV--VTPVAVTAPIPSTVPLGIVGLAPVPPPNRPLSRAEQPMGALLEDFDSDGEGNYGP 600
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10690.934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKD1_ECTSI1.040e-1052.17Aardvark n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10690contigS-firma_F_contig10690:1254..1996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10690.934.1mRNA_S-firma_F_contig10690.934.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10690 1234..1996 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10690.934.1 ID=prot_S-firma_F_contig10690.934.1|Name=mRNA_S-firma_F_contig10690.934.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=106bp
MVSSVDHGGLKSMEPVPPSAVAAAAGAAAGGRHSRNASAEKVTVPPAAPI
TVPPAAAATKTAAAIGVVPTPPNNRPRSKAEQPIGALLEDFDSDGEGSYG
PGPEEP
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