prot_S-firma_F_contig10679.916.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10679.916.1
Unique Nameprot_S-firma_F_contig10679.916.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length426
Homology
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BLAST of mRNA_S-firma_F_contig10679.916.1 vs. uniprot
Match: D7FTH3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH3_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 3.080e-7
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:    1 MVSLLGRRCGHPGCNTNASYGVHGSKRPEFCSRHAQDGM 39
            M+ L+ +RCGHPGC  + S+G  GSKRPE C++H+Q+GM
Sbjct:    1 MIDLVSKRCGHPGCMKHPSHGKDGSKRPEICAQHSQEGM 39
[Close]
BLAST of mRNA_S-firma_F_contig10679.916.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.910e-5
Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    1 MVSLLGRRCGHPGCNTNASYGVHGSKRPEFCSRHAQDGM 39
            M+ +  + C H GC T A++GV GSK+ EFCSRHA+DGM
Sbjct:    1 MIHVRAKTCDHVGCTTRANFGVPGSKKAEFCSRHAEDGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10679.916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTH3_ECTSI3.080e-756.41EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LCH9_ECTSI1.910e-556.41EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31827FAMILY NOT NAMEDcoord: 6..187
coord: 83..223
coord: 158..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10679contigS-firma_F_contig10679:3779..5056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10679.916.1mRNA_S-firma_F_contig10679.916.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10679 1820..5085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10679.916.1 ID=prot_S-firma_F_contig10679.916.1|Name=mRNA_S-firma_F_contig10679.916.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=426bp
MVSLLGRRCGHPGCNTNASYGVHGSKRPEFCSRHAQDGMVSLVGRRCGFP
GCNVGANYGVNGSTKREFCSRHAQDGMVHVWVHRCGHPGCTTRATYGVDG
SKKPEFCSRHAQDGMINVVTRRCVHPGCTIRPHFGEPGNKREFCSRHSRE
GMVNLGLKRCGHPGCNTNASYGVNGSKKTEFCSRHAQDGMVSLLGRRCGH
PGCNTNASYGVHGSKRPEFCSRHAQDGMVSLVGRRCGHPGCNIHASYGVH
GSKRPEFCSRHAQDGMVSLVGRRCGFPGCNTHASYGVNGSKRSDFCLAHA
TDGMVNVRVKKCGHPGCNKGASVDVNFSTKREFCCVHAKQRTPSVHSRGV
SDSRIKKEICTEQLSGSSATRSDGKRVSKRGQAAASPVWAGSLDTMAAAA
EPFTGLSKRRRTAAGNGDIVSTGPT*
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