prot_S-firma_F_contig10673.912.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10673.912.1
Unique Nameprot_S-firma_F_contig10673.912.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length154
Homology
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: A0A6H5L4N8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N8_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.880e-85
Identity = 145/152 (95.39%), Postives = 148/152 (97.37%), Query Frame = 0
Query:    3 DEARRKRLEREKAARENRTEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            DEARRKRLEREKAARE R  DSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKV ELN+TMKVDVKLPGML+IDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNK+
Sbjct:  455 DEARRKRLEREKAAREARNADSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVEELNQTMKVDVKLPGMLIIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKI 606          
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: A0A836CHS5_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS5_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.380e-67
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = 0
Query:   20 RTEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            R+  SLRSPIVCIMGHVDTGKTKLLDKIRQT+VQEGEAGGITQQIGATFF+KETL +KVA L +   ++V+LPGMLVIDTPGHESFTNLRSRGSSLCDIAILV+DLMHGLEPQTIESLNLLRSKRTPFV+ALNK+
Sbjct:  419 RSAASLRSPIVCIMGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATFFAKETLKDKVAVLAQEAGLEVRLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVIDLMHGLEPQTIESLNLLRSKRTPFVVALNKI 553          
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: I2CSG6_NANGC (Eukaryotic translation initiation factor 5B (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSG6_NANGC)

HSP 1 Score: 228 bits (581), Expect = 7.210e-67
Identity = 113/152 (74.34%), Postives = 135/152 (88.82%), Query Frame = 0
Query:    3 DEARRKRLEREKAARENRTEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            +EAR++R+ RE+AA ++R+ + LRSPI CIMGHVDTGKTKLLD IR+T+VQEGEAGGITQQIGATFF ++ +  +  E NE+  +DVKLPG+L+IDTPGHESFTNLRSRGS+LCDIAILV+DLMHGLEPQTIESL LLR KRTPFV+ALNKV
Sbjct:  363 EEARKRRVAREEAALQSRSSEKLRSPICCIMGHVDTGKTKLLDNIRRTNVQEGEAGGITQQIGATFFPRDHILTRTKEANESFHLDVKLPGLLIIDTPGHESFTNLRSRGSTLCDIAILVIDLMHGLEPQTIESLQLLRRKRTPFVVALNKV 514          
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: G4YGI1_PHYSP (Eukaryotic translation initiation factor 5B n=2 Tax=Phytophthora TaxID=4783 RepID=G4YGI1_PHYSP)

HSP 1 Score: 220 bits (561), Expect = 5.590e-66
Identity = 112/151 (74.17%), Postives = 129/151 (85.43%), Query Frame = 0
Query:    4 EARRKRLEREKAARENRTEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            EA  +R ERE AAR N + D+LRSPI CIMGHVDTGKTKLLD IR+T VQ+ EAGGITQQIGATFF  E + +K A L ETMK++ +LPG+LVIDTPGHESFTNLR+RGSSLCDIAILVVD+MHGLEPQT+ESL LLR K+ PFV+ALNK+
Sbjct:    9 EAAERRREREAAARANVSLDNLRSPICCIMGHVDTGKTKLLDNIRKTKVQDAEAGGITQQIGATFFPVEAIKQKTARLAETMKLEYRLPGLLVIDTPGHESFTNLRTRGSSLCDIAILVVDIMHGLEPQTLESLRLLRQKKAPFVVALNKI 159          
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: A0A7S4K8F1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K8F1_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.860e-65
Identity = 114/152 (75.00%), Postives = 131/152 (86.18%), Query Frame = 0
Query:    3 DEARRKRLEREKAARENRTEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            DE +RKR+E+EKA    RT D+LR PI  IMGHVDTGKTKLLDKIR+T+VQ GEAGGITQQIGAT+F + TL  + A+LNET K D+ +PGMLVIDTPGHESFTNLRSRGSSLCD+AILV+DLMHGLE QTIESLN+L+ K TPFV+ALNKV
Sbjct:  317 DEGKRKRIEQEKANLAARTRDNLRCPIAVIMGHVDTGKTKLLDKIRKTNVQGGEAGGITQQIGATYFEQSTLKTQTAKLNETEKFDITVPGMLVIDTPGHESFTNLRSRGSSLCDVAILVIDLMHGLEQQTIESLNMLKQKNTPFVVALNKV 468          
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: H8ZWR1_9EUKA (Eukaryotic translation initiation factor 5b (Fragment) n=1 Tax=Collodictyon triciliatum TaxID=190325 RepID=H8ZWR1_9EUKA)

HSP 1 Score: 206 bits (523), Expect = 4.750e-65
Identity = 98/134 (73.13%), Postives = 120/134 (89.55%), Query Frame = 0
Query:   21 TEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            ++D+LRSPI CI+GHVDTGKTKLLDKIR T+VQEGEAGGITQQIGATFF  E++ +  +++    K+  K+PG+L+IDTPGHESFTNLRSRGSSLCDIAILVVD+MHGLEPQTIES+NLL+ ++TPF++ALNKV
Sbjct:   49 SDDNLRSPICCILGHVDTGKTKLLDKIRSTNVQEGEAGGITQQIGATFFPMESIRQLTSKVGFDHKMAYKVPGLLIIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEPQTIESINLLKMRKTPFIVALNKV 182          
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: A0A5D6XPT0_9STRA (Eukaryotic translation initiation factor 5B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPT0_9STRA)

HSP 1 Score: 223 bits (567), Expect = 6.500e-65
Identity = 111/143 (77.62%), Postives = 126/143 (88.11%), Query Frame = 0
Query:   12 REKAARENRTEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            RE+AA  N + D+LRSPI CIMGHVDTGKTKLLD IR+T VQ+GEAGGITQQIGATFF  E + +K A LNETMK++ KLPG+LVIDTPGHESFTNLRSRGSSLCDIAILVVD+MHGLEPQT+ESL LLR K+ PFV+ALNK+
Sbjct:  374 REEAALANVSLDNLRSPICCIMGHVDTGKTKLLDNIRKTKVQDGEAGGITQQIGATFFPVEAIKQKTARLNETMKLEYKLPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEPQTLESLRLLRQKKAPFVVALNKI 516          
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: A0A1E7FX92_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX92_9STRA)

HSP 1 Score: 217 bits (553), Expect = 9.530e-65
Identity = 109/151 (72.19%), Postives = 127/151 (84.11%), Query Frame = 0
Query:    4 EARRKRLEREKAARENRTEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            E +RKR E EK     R+ D LR P+  IMGHVDTGKTKLLDKIR+T+VQEGEAGGITQQIGAT+F K+TL  + A+LN T   D+K+PGMLVIDTPGHESF NLRSRGSSLCD+AILV+D+MHGLEPQTIESLN+LR K+ PFV+ALNK+
Sbjct:    8 EGKRKREEEEKINLAARSPDDLRCPVTVIMGHVDTGKTKLLDKIRKTNVQEGEAGGITQQIGATYFEKKTLETQTAKLNATEAFDIKIPGMLVIDTPGHESFANLRSRGSSLCDVAILVIDMMHGLEPQTIESLNMLREKKVPFVVALNKI 158          
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: A0A7S2Y322_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y322_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.410e-64
Identity = 114/152 (75.00%), Postives = 133/152 (87.50%), Query Frame = 0
Query:    3 DEARRKRLEREKAARENRTEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            DE +RKR+E+EK   + R+ D LR P+V IMGHVDTGKTKLLDKIR+T+VQEGEAGGITQQIGAT+F K+TL  + A+LNET KV++K+PGMLVIDTPGHESFTNLRSRGSSLCD+AILVVDLMHGLE QTIESL +L  ++ PFVIALNKV
Sbjct:  378 DEGKRKRMEQEKKNLDARSPDDLRCPVVVIMGHVDTGKTKLLDKIRKTNVQEGEAGGITQQIGATYFEKKTLEAQTAKLNETEKVELKVPGMLVIDTPGHESFTNLRSRGSSLCDVAILVVDLMHGLEQQTIESLQMLVKRQVPFVIALNKV 529          
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Match: A0A7S2KAZ8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KAZ8_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.930e-64
Identity = 113/147 (76.87%), Postives = 128/147 (87.07%), Query Frame = 0
Query:    8 KRLEREKAARENRTEDSLRSPIVCIMGHVDTGKTKLLDKIRQTSVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTPGHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIALNKV 154
            +RLE+EKA  E RT D LR PIV IMGHVDTGKTKLLDKIR+T+VQEGEAGGITQQIGAT+F K+TL  +  +LNET K ++ LPGMLVIDTPGHESFTNLRSRGSSLCD+AILVVDLMHGLE QTIESL +LR + TPFV+ALNK+
Sbjct:  382 RRLEQEKANLEARTRDDLRCPIVVIMGHVDTGKTKLLDKIRKTNVQEGEAGGITQQIGATYFEKKTLLTQTEKLNETEKFNLTLPGMLVIDTPGHESFTNLRSRGSSLCDVAILVVDLMHGLEQQTIESLTMLRKRGTPFVVALNKI 528          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10673.912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N8_9PHAE1.880e-8595.39Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CHS5_9STRA1.380e-6785.93Tr-type G domain-containing protein n=1 Tax=Tribon... [more]
I2CSG6_NANGC7.210e-6774.34Eukaryotic translation initiation factor 5B (Fragm... [more]
G4YGI1_PHYSP5.590e-6674.17Eukaryotic translation initiation factor 5B n=2 Ta... [more]
A0A7S4K8F1_9STRA1.860e-6575.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
H8ZWR1_9EUKA4.750e-6573.13Eukaryotic translation initiation factor 5b (Fragm... [more]
A0A5D6XPT0_9STRA6.500e-6577.62Eukaryotic translation initiation factor 5B n=1 Ta... [more]
A0A1E7FX92_9STRA9.530e-6572.19p-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2Y322_9STRA1.410e-6475.00Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2KAZ8_9STRA1.930e-6476.87Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 29..42
score: 46.78
coord: 95..105
score: 52.24
coord: 111..122
score: 45.57
coord: 147..154
score: 30.56
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 29..154
e-value: 1.2E-26
score: 93.5
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 25..154
score: 37.553
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 30..154
e-value: 3.6E-16
score: 57.3
NoneNo IPR availableGENE3D3.40.50.300coord: 24..154
e-value: 1.4E-47
score: 163.3
NoneNo IPR availablePANTHERPTHR43381:SF4EUKARYOTIC TRANSLATION INITIATION FACTOR 5Bcoord: 10..154
IPR015760Translation initiation factor IF- 2PANTHERPTHR43381FAMILY NOT NAMEDcoord: 10..154
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 21..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10673contigS-firma_F_contig10673:667..2001 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10673.912.1mRNA_S-firma_F_contig10673.912.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10673 667..2001 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10673.912.1 ID=prot_S-firma_F_contig10673.912.1|Name=mRNA_S-firma_F_contig10673.912.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=154bp
SQDEARRKRLEREKAARENRTEDSLRSPIVCIMGHVDTGKTKLLDKIRQT
SVQEGEAGGITQQIGATFFSKETLCEKVAELNETMKVDVKLPGMLVIDTP
GHESFTNLRSRGSSLCDIAILVVDLMHGLEPQTIESLNLLRSKRTPFVIA
LNKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR015760TIF_IF2
IPR005225Small_GTP-bd_dom
IPR000795TF_GTP-bd_dom