prot_S-firma_F_contig10655.886.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10655.886.1
Unique Nameprot_S-firma_F_contig10655.886.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length285
Homology
BLAST of mRNA_S-firma_F_contig10655.886.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.930e-29
Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 0
Query:  185 GMQKALALLRNLQGPNYPYPHLVVVKKIQAEGRSSLRSRLRGMFVMDMTLHFLCSFDKIEVPCGHGGNGYRLRTTRGWVKKIAPALQVTAVIAKVALRAVA 285
            G+Q++L  L+NLQGPNYPYPHLVVVK+I+ +G   L ++ RG+ + DMTLHFL   D  +VPCG  G GYR R TRGWVKK++P LQV  V AKVAL+A A
Sbjct:  714 GIQESLMCLKNLQGPNYPYPHLVVVKEIETQGNRGLLTKARGIAMKDMTLHFLFPVDMSKVPCGVDGEGYRFRETRGWVKKLSPVLQVAVVTAKVALKATA 814          
BLAST of mRNA_S-firma_F_contig10655.886.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 5.800e-26
Identity = 66/106 (62.26%), Postives = 71/106 (66.98%), Query Frame = 0
Query:  187 QKALALLRNLQGPNYPYPHLVVVKKIQAEGRSS--------LRSRLRGMFVMDMTLHFLCSFDKIEVPCGHGGNGYRLRTTRGWVKKIAPALQVTAVIAKVALRAV 284
            Q++L  L+NLQ PNY YP LVVVKK    GRSS        L S+LRGM   DMTLHFLC  D  EVPCG GG GYR R  R WVKKI+P LQVT V AKVAL AV
Sbjct: 1081 QESLMRLKNLQAPNYLYPRLVVVKKDGNGGRSSRATGWKRCLPSKLRGMGKKDMTLHFLCPVDMTEVPCGPGGEGYRFREMRDWVKKISPVLQVTLVTAKVALNAV 1186          
BLAST of mRNA_S-firma_F_contig10655.886.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 5.560e-24
Identity = 58/104 (55.77%), Postives = 71/104 (68.27%), Query Frame = 0
Query:  187 QKALALLRNLQGPNYPYPHLVVVKKI-------QAEGRSSLRSRLRGMFVMDMTLHFLCSFDKIEVPCGHGGNGYRLRTTRGWVKKIAPALQVTAVIAKVALRA 283
            Q++L  LR+LQ PNY YP LVVVK++       +A GR S+ S+L G+   DMTL FLC  D  +VPCG+GG GYR + TR WVKKI+P LQV  V AKVAL A
Sbjct: 1091 QESLMRLRDLQAPNYRYPRLVVVKEVGSDGTASKARGRKSMLSKLCGVGKKDMTLQFLCPVDMTQVPCGYGGEGYRFKETRSWVKKISPVLQVAVVTAKVALNA 1194          
BLAST of mRNA_S-firma_F_contig10655.886.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.370e-23
Identity = 57/109 (52.29%), Postives = 71/109 (65.14%), Query Frame = 0
Query:  184 RGMQKALALLRNLQGPNYPYPHLVVVKKI-------QAEGRSSLRSRLRGMFVMDMTLHFLCSFDKIEVPCGHGGNGYRLRTTRGWVKKIAPALQVTAVIAKVALRAVA 285
            +  Q+ L  L+NLQ PNY YP LV V+++       +A G   + S+LRG+   +M LHFLC  D  +VPCG+GG GYR R TRGWVKKI+P LQV  V AKVAL A A
Sbjct: 1021 KNTQEILMRLKNLQAPNYLYPRLVAVEEVASGSTPSRAHGMKRVLSKLRGVGKKEMVLHFLCPVDMTKVPCGYGGEGYRFRETRGWVKKISPVLQVAVVTAKVALNATA 1129          
BLAST of mRNA_S-firma_F_contig10655.886.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 6.940e-22
Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 0
Query:  187 QKALALLRNLQGPNYPYPHLVVVKKI-------QAEGRSSLRSRLRGMFVMDMTLHFLCSFDKIEVPCGHGGNGYRLRTTRGWVKKIAPALQVTAVIAKVALRA 283
            Q++L  L+NLQ  NYPYP LV V++I       +A G + + ++LRG+   +M LHFLC  D  +VPCG+GG GYR R  R WVKK++P LQV  V AKVAL+A
Sbjct:  917 QESLMRLKNLQAANYPYPRLVAVEEIASGGTPSKAHGINRVLNKLRGVGTKEMVLHFLCPVDMTKVPCGYGGEGYRFREARRWVKKLSPVLQVAVVTAKVALKA 1020          
BLAST of mRNA_S-firma_F_contig10655.886.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 4.650e-20
Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = 0
Query:  183 ARGMQKALALLRNLQGPNYPYPHLVVVKKIQAEGRSSLR-------SRLRGMFVMDMTLHFLCSFDKIEVPCGHGGNGYRLRTTRGWVKKIAPALQV 272
            A    ++L  L NL  PNY YP LVVVK++ + G SS          ++RG+   DMTLHFLC  D   VPCG+GG GYR++ TRGWVKKI+P LQV
Sbjct:  884 AESTHESLMRLENLLDPNYRYPRLVVVKEVGSNGTSSNAHGVKRWLGKIRGVGKKDMTLHFLCPVDMTTVPCGYGGEGYRIQETRGWVKKISPVLQV 980          
BLAST of mRNA_S-firma_F_contig10655.886.1 vs. uniprot
Match: A0A6H5KJH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH8_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 4.400e-12
Identity = 40/82 (48.78%), Postives = 48/82 (58.54%), Query Frame = 0
Query:  199 PNYPYPHLVVV--------KKIQAEGRSSLRSRLRGMFVMDMTLHFLCSFDKIEVPCGHGGNGYRLRTTRGWVKKIAPALQV 272
            P   YP LVVV        K   A G   + S+L G+   +M LH LC  D  +VPCG+GG GYR R TRGWVKKI+P LQ+
Sbjct:   19 PRVVYPRLVVVVEQVASGSKPSGAHGMKRVLSKL-GVGEKEMVLHSLCPVDMTKVPCGYGGEGYRFRETRGWVKKISPLLQL 99          
BLAST of mRNA_S-firma_F_contig10655.886.1 vs. uniprot
Match: A0A6H5JZH9_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH9_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 7.320e-12
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0
Query:  185 GMQKALALLRNLQGPNYPYPHLVVVKKI-------QAEGRSSLRSRLRGMFVMDMTLHFLCSFDKIEVPCGHGGNGYRL 256
            G Q++L  L+NLQ PNY YPHLVVVK++       ++ G+ S+ S+LRG    DM LHFLC  D    PC  GG+  RL
Sbjct:  360 GTQESLMRLKNLQAPNYRYPHLVVVKEVGSDGTASESHGKKSMLSKLRGFGKKDMRLHFLCPVDMTTAPCCPGGSDNRL 438          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10655.886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L846_9PHAE1.930e-2960.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF46_ECTSI5.800e-2662.26LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LJS7_ECTSI5.560e-2455.77LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC3_ECTSI1.370e-2352.29LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC9_ECTSI6.940e-2250.96LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KSZ8_9PHAE4.650e-2051.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH8_9PHAE4.400e-1248.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZH9_9PHAE7.320e-1248.10Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.1070coord: 112..191
e-value: 1.0E-5
score: 27.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10655contigS-firma_F_contig10655:1679..3578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10655.886.1mRNA_S-firma_F_contig10655.886.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10655 1663..3578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10655.886.1 ID=prot_S-firma_F_contig10655.886.1|Name=mRNA_S-firma_F_contig10655.886.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=285bp
MGCRMNHDHDGEKMYHLATSNEEENRSPGSEIVPTTRNLPWHEGTKQRNM
CGMQGLDARGSCTLDPDVFGKVLDVKQPFSISDKAEAKPRASEDRNTDPS
ESTDLAQVVRRVDGRMDRVEEGIDRVAEGVNAVRGGFGRVEEGMGRVEEG
VGRVEESVTRVEEGVGGVEESLQRLDEDVQGIARGMQKALALLRNLQGPN
YPYPHLVVVKKIQAEGRSSLRSRLRGMFVMDMTLHFLCSFDKIEVPCGHG
GNGYRLRTTRGWVKKIAPALQVTAVIAKVALRAVA
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