prot_S-firma_F_contig1064.870.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1064.870.1
Unique Nameprot_S-firma_F_contig1064.870.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length619
Homology
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 2.710e-121
Identity = 392/538 (72.86%), Postives = 409/538 (76.02%), Query Frame = 0
Query:   56 QLHLQQVHDSDQAAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQLICQTGGSRQLVDSSSGSGPYTQSAATTGASAKVRKSILQMRPEELDAETLLRSGAEDGAQERGAGXXXXXXXXXXXXGAMADLSGMGNPTSPL----GVRQEKED----GDLSIGGEGGGGEHPDLQAMEQAAXXXXXXXXXXXXXXX-QSPYGMPPHMAMAGMAMGYSPYVHMAAAAQAQQHAMAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPGSXXXXXXXXXXXXXXXXXXX---MIGMPYPFQGHGYPGMPGYGVPGMGSYPSLAAGGDH---MASSLGMSGMAAMQLAAQTMHQQXXXXXXXXXXXXXXXAGLGIHHPXXXXXXXXXXYHDPNNPHXXXXHIDLNQPQEVQSQQLTYHQHH 577
            +L  QQ HD+DQAAI+  XXXX    XXXXXXXXXXXXXXXXXXXX IPGLEDKRAKRGFSKRVTLRDLERYFEYPIE+VSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQG DRQRLQEQLVSLHYKKQLICQ                    AATTGASAKVRKSILQMRPEELDAETLLR+G   G       XXXXXXXXXXXX    +   +GNPTSPL    GV QE+      G+ S GG+G  G  PD+QAME+AA XXXXXXXXXXXXX  QSPYGMPPHM+MAGM MGYSPYVHMAAA          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXX                  M+GMPYPFQ HGYPGMPGYGVPGMGSYPSLAAGG      +SS GMSGMAAMQLAAQ+MHQ XXXXXXXXXXXXXXX         XXXXX  XXYHDPN+P     HIDLNQP EVQS QLTYHQHH
Sbjct:   45 ELTPQQQHDADQAAIKAAXXXXEAVHXXXXXXXXXXXXXXXXXXXXXIPGLEDKRAKRGFSKRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQ--------------------AATTGASAKVRKSILQMRPEELDAETLLRTG---GXXXXXXXXXXXXXXXXXXXXXATEFGDLGNPTSPLAEAPGVPQEEAGPAGVGEASAGGDGAYG--PDIQAMEEAAAXXXXXXXXXXXXXAAQSPYGMPPHMSMAGMGMGYSPYVHMAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPMHGYGLHAMYGGYPGMMGMPYPFQAHGYPGMPGYGVPGMGSYPSLAAGGGDPTLASSSFGMSGMAAMQLAAQSMHQXXXXXXXXXXXXXXXXXXXXX----XXXXXHPXXYHDPNHPQHQQ-HIDLNQPHEVQSHQLTYHQHH 552          
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 4.280e-78
Identity = 284/551 (51.54%), Postives = 297/551 (53.90%), Query Frame = 0
Query:   56 QLHLQQVHDSDQAAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQLICQTGGSRQLVDSSSGSGPYTQSAATTGASAKVRKSILQMRPEELDAETLLRSGAEDGAQERGAGXXXXXXXXXXXXGAM-ADLSGMGNPTSPL----GVRQEKEDGDLSIGGEGGGGEHPDLQAMEQAAXXXXXXXXXXXXXXXQSPYGMPPHMAMAGMAMGYSPYVHMAAAAQAQQHAMAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPGSXXXXXXXXXXXXXXXXXXXMIGMPYPFQGHGYPGMPGYGVPGMGSYPSLAAGGDH---MASSLGMSGM------AAMQLAAQTMHQQXXXXXXXXXXXXXXXAGLGIHHPXXXXXXXXXX--------------YHDPNNPHXXXXHIDLNQPQEVQSQQLTYHQHH 577
            +L  QQ HD+DQAAI+  XXXX    XXXXXXXXXXXXXXXXXXXX IPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQG DRQRLQEQLVSLHYKKQLICQ                    AATTGASAKVRKSILQMRPEELDAETLLR+G           XXXXXXXXXXXX     +   +GNPTSPL    GV+QE+        G  GGGE                                    A AG    Y P +                                                                                                 Q HGYPGMPGYG    GSYPSLAAGG      +SS GM+        AAMQLAAQ+MHQ XXXXXXXXXXXXXXX        XXXXXXXXXX              YHDPN+P     HIDLNQP EVQS QLTYHQHH
Sbjct:   43 ELTPQQQHDADQAAIKAAXXXXEAVHXXXXXXXXXXXXXXXXXXXXXIPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQEQLVSLHYKKQLICQ--------------------AATTGASAKVRKSILQMRPEELDAETLLRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFGDLGNPTSPLAAAPGVQQEEA-------GSAGGGE------------------------------------ASAGGDGAYGPDI-------------------------------------------------------------------------------------------------QAHGYPGMPGYGXXXXGSYPSLAAGGGDPTLASSSFGMNXXXXXXXXAAMQLAAQSMHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPXXYHDPNHPQHQQ-HIDLNQPHEVQSHQLTYHQHH 432          
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: A0A2D4BXJ0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXJ0_PYTIN)

HSP 1 Score: 83.2 bits (204), Expect = 4.060e-13
Identity = 39/96 (40.62%), Postives = 66/96 (68.75%), Query Frame = 0
Query:  106 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQLI 201
            E  R K   +K +T+ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +AQG +R + ++Q++SL  K+  +
Sbjct:  151 ESNRVKSLVTKHITIDELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAQGPERDKYRDQIISLKLKRDAV 246          
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 5.970e-13
Identity = 51/160 (31.87%), Postives = 85/160 (53.12%), Query Frame = 0
Query:  104 GLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSI-KYVELLARTAQGADRQRLQEQLVSLHYKKQLICQTGGSRQLVDSSSGSGPYTQSAATTGASAKVRKSILQMRPEELDAETLLRSGAEDGAQER 262
            G++ ++  R   +R+TL  LE  +  P+   ++ +GVS T++K+LCR+YGI+RWP+RQIRS+ K + K+++  A+     D     E++  L  K+ ++ +T                    A+ G +A +R +I   RP ELDA+ L  SG     Q R
Sbjct:   86 GVKIRQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQARAQATSAVDIAACDERIALLQKKRAIVVKT--------------------ASCGLNASLRSAIFMARPGELDADQLFSSGVIPAFQVR 225          
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: D0NKH4_PHYIT (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0NKH4_PHYIT)

HSP 1 Score: 81.6 bits (200), Expect = 1.060e-12
Identity = 37/96 (38.54%), Postives = 68/96 (70.83%), Query Frame = 0
Query:  106 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQLI 201
            E  R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G++R++ ++Q+V+L  K++ +
Sbjct:  128 ESNRVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESV 223          
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: A0A0P1AY22_PLAHL (SANT/Myb domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY22_PLAHL)

HSP 1 Score: 81.6 bits (200), Expect = 1.090e-12
Identity = 37/96 (38.54%), Postives = 67/96 (69.79%), Query Frame = 0
Query:  106 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQLI 201
            E  R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G++R+R ++Q+ +L  K++ +
Sbjct:  126 ESNRVKSLVTKHISIEELRTHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSERERYRDQITNLKMKRECV 221          
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: A0A8K1C3I8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3I8_PYTOL)

HSP 1 Score: 81.6 bits (200), Expect = 1.100e-12
Identity = 37/96 (38.54%), Postives = 67/96 (69.79%), Query Frame = 0
Query:  106 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQLI 201
            E  R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    + QG++R++ ++Q++SL  K+  +
Sbjct:  120 ESNRVKSMVTKHISIDELRAHFDRPIIDVAKEFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSTQGSEREKYRDQIMSLKLKRDAV 215          
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: A0A833SV88_PHYIN (Myb-like DNA-binding domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SV88_PHYIN)

HSP 1 Score: 81.6 bits (200), Expect = 1.160e-12
Identity = 37/96 (38.54%), Postives = 68/96 (70.83%), Query Frame = 0
Query:  106 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQLI 201
            E  R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G++R++ ++Q+V+L  K++ +
Sbjct:  128 ESNRVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESV 223          
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: A0A2P4YM33_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YM33_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.230e-12
Identity = 37/96 (38.54%), Postives = 68/96 (70.83%), Query Frame = 0
Query:  106 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQLI 201
            E  R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G++R++ ++Q+V+L  K++ +
Sbjct:  127 ESNRVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESV 222          
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Match: G4ZYN2_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZYN2_PHYSP)

HSP 1 Score: 81.6 bits (200), Expect = 1.290e-12
Identity = 37/96 (38.54%), Postives = 68/96 (70.83%), Query Frame = 0
Query:  106 EDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQLI 201
            E  R K   +K +++ +L  +F+ PI +V+K  G+  T++K++CR+ GIKRWP+RQIRS++KSI  +E    +A G++R++ ++Q+V+L  K++ +
Sbjct:  141 ESNRVKSLVTKHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGSEREKYRDQIVNLKMKRESV 236          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1064.870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0H9_9PHAE2.710e-12172.86RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LJT6_ECTSI4.280e-7851.54Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A2D4BXJ0_PYTIN4.060e-1340.63Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A836CMG7_9STRA5.970e-1331.88RWP-RK domain-containing protein n=1 Tax=Tribonema... [more]
D0NKH4_PHYIT1.060e-1238.54Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A0P1AY22_PLAHL1.090e-1238.54SANT/Myb domain n=1 Tax=Plasmopara halstedii TaxID... [more]
A0A8K1C3I8_PYTOL1.100e-1238.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A833SV88_PHYIN1.160e-1238.54Myb-like DNA-binding domain n=1 Tax=Phytophthora i... [more]
A0A2P4YM33_9STRA1.230e-1238.54Uncharacterized protein n=2 Tax=Phytophthora palmi... [more]
G4ZYN2_PHYSP1.290e-1238.54Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 118..165
e-value: 7.1E-19
score: 67.5
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 105..185
score: 18.758
NoneNo IPR availablePANTHERPTHR21704:SF19coord: 42..588
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 42..588

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1064contigS-firma_F_contig1064:19962..24295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1064.870.1mRNA_S-firma_F_contig1064.870.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1064 19962..24295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1064.870.1 ID=prot_S-firma_F_contig1064.870.1|Name=mRNA_S-firma_F_contig1064.870.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=619bp
RGPDHRLSFGSSRTPKKMSASPLSTPFPPPPGSAVGGGPLSPQEQQQQQQ
QQQQLQLHLQQVHDSDQAAIRAAAAAVEAVHRAAAAPPAGYGVDDDDDDD
DIPGLEDKRAKRGFSKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCR
KYGIKRWPYRQIRSVNKSIKYVELLARTAQGADRQRLQEQLVSLHYKKQL
ICQTGGSRQLVDSSSGSGPYTQSAATTGASAKVRKSILQMRPEELDAETL
LRSGAEDGAQERGAGAGGGGSGAEGGAGAMADLSGMGNPTSPLGVRQEKE
DGDLSIGGEGGGGEHPDLQAMEQAAAAASAAAAAAAAAAAQSPYGMPPHM
AMAGMAMGYSPYVHMAAAAQAQQHAMAHHQHQQQQQQHHQQQQQQQQPQS
PSQQQQGGGGAAEGGGGGAGAGAAAAPPPAPGSPASPMHPYGLHAMYAGY
PGMIGMPYPFQGHGYPGMPGYGVPGMGSYPSLAAGGDHMASSLGMSGMAA
MQLAAQTMHQQQHEQAAQAQAQAAAQAGLGIHHPPHQQQQQQQQYHDPNN
PHQQQQHIDLNQPQEVQSQQLTYHQHHVHQRQLQMQQEASMETSATAATA
AAAAAASSTNAGASPSSSA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033031SCC2/Nipped-B
IPR003035RWP-RK_dom