prot_S-firma_F_contig10616.841.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10616.841.1
Unique Nameprot_S-firma_F_contig10616.841.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length91
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10616.841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 38..71
e-value: 3.8E-6
score: 36.4
coord: 4..37
e-value: 1.7
score: 17.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 38..71
score: 9.47
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 4..37
score: 9.352
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 40..71
e-value: 7.3E-10
score: 38.2
NoneNo IPR availablePFAMPF13432TPR_16coord: 10..39
e-value: 3.8E-5
score: 24.2
NoneNo IPR availablePANTHERPTHR46050FAMILY NOT NAMEDcoord: 2..91
IPR011717Tetratricopeptide TPR-4PFAMPF07721TPR_4coord: 73..91
e-value: 0.24
score: 12.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..91
e-value: 1.7E-24
score: 88.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..91
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 4..91
score: 22.701

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10616contigS-firma_F_contig10616:444..891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10616.841.1mRNA_S-firma_F_contig10616.841.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10616 444..891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10616.841.1 ID=prot_S-firma_F_contig10616.841.1|Name=mRNA_S-firma_F_contig10616.841.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=91bp
MADPSAMVNVANDLFSAGDFEAALKAYEDALASMPDTPELECNRGAALRN
LGRPEEALVALDKALELNPEFVQAHHNRGLTLHAVGRAEDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR011717TPR-4
IPR001440TPR_1
IPR019734TPR_repeat