prot_S-firma_F_contig10608.833.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10608.833.1
Unique Nameprot_S-firma_F_contig10608.833.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length77
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10608.833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..70
e-value: 2.5E-17
score: 64.3
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 14..49
e-value: 1.0E-8
score: 35.3
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 2..67
NoneNo IPR availablePANTHERPTHR46662:SF10coord: 2..67
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10608contigS-firma_F_contig10608:1559..1920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10608.833.1mRNA_S-firma_F_contig10608.833.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10608 1559..1920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10608.833.1 ID=prot_S-firma_F_contig10608.833.1|Name=mRNA_S-firma_F_contig10608.833.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=77bp
LAGHIPQKLGALSKLETLSLWNNKLTGSIPPELGKLTALKKLYLGKNQLS
GKPSSLMRYTSIMCLAADESRPRVGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025875Leu-rich_rpt_4
IPR032675LRR_dom_sf