prot_S-firma_F_contig10586.795.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10586.795.1
Unique Nameprot_S-firma_F_contig10586.795.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length66
Homology
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BLAST of mRNA_S-firma_F_contig10586.795.1 vs. uniprot
Match: A0A6H5JJP7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJP7_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 4.010e-31
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 0 
Query:    1 GEGGGPIEKGTMPSYEEEQEKAFFNSELDNAPAAERVKDPVVLITLGWIVGIFLLVVGLILNGVN 65
            GEGGGPIEKGTMPSYEEEQ+KAFFNSELDNAPA E+VKDPVV+ITL WI+G+FLL  GLILNGVN
Sbjct:   78 GEGGGPIEKGTMPSYEEEQDKAFFNSELDNAPATEKVKDPVVIITLAWILGMFLLATGLILNGVN 142
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10586.795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJP7_9PHAE4.010e-3186.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availableTMHMMTMhelixcoord: 42..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10586contigS-firma_F_contig10586:3719..4996 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10586.795.1mRNA_S-firma_F_contig10586.795.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10586 3719..4996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10586.795.1 ID=prot_S-firma_F_contig10586.795.1|Name=mRNA_S-firma_F_contig10586.795.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=66bp
GEGGGPIEKGTMPSYEEEQEKAFFNSELDNAPAAERVKDPVVLITLGWIV
GIFLLVVGLILNGVN*
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