prot_S-firma_F_contig10488.684.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10488.684.1
Unique Nameprot_S-firma_F_contig10488.684.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length556
Homology
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BLAST of mRNA_S-firma_F_contig10488.684.1 vs. uniprot
Match: D7FHZ2_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ2_ECTSI)

HSP 1 Score: 427 bits (1097), Expect = 3.030e-137
Identity = 291/588 (49.49%), Postives = 341/588 (57.99%), Query Frame = 0 
Query:    1 VHRHKTLKDEDLIPDDTVDNGEQAEVEEVVTGQGLDLSYLWVVDAKNLGQRSRPSTSNAKRSSSTATKKQTTPTTDAQGRKQQTSEDERSGDGGDEETEKAQGSGSDSASPKQVG--------GETQGPTKSGGGESLVEPGPDGERSPPGGARDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGRLVPGSLLLTSLSVSDLPNTEKGVFSKQQDPYLVVKWGGQEARTSAKRDSGRDCSWSNEELALIVRTKKQLQEPVEIEVWNDNAGDKKPSPDVLIAKGPLPVKHLALPQPTAPASATDGNGSMKGGGRDNHTDDERGREGVVLNVDLMHGGGWGRKKKNASAGVITLTLEYIPPRRKQTXXXXXXXXXXXXRGRG------------------------EEGDQAATDTDDDGLSSIAGLSALSSLGKKNNLSVQELGAAMSQALEGFDVREELNKIGYAQGIINEGFGQRGAFADIQEKHLVGHPIYVPRGARKRILTLAELVRLQMKAEASGVTKAKEVSEADGPTDVRAFEGGYTVDGVVFFDTLAAMKLSLEEDKIKAELAIANE 556
            VHRHKTLKD+DL+PDD+VDNGEQ EVE+V+ G+GLDLSYLWVVDA  +  RS  STS+ + SS TA K  TT  ++ +  +++  +D  SG+G  E  E  QGSG+ +A  +  G        G+      +GGGE+LV     G+          +                                       RKGRLVPGSL+LTS+S +DLP+TEKGVFSKQ DPYLV +WG QE RTSAKRDSG+ CSW  EE+AL+VRTKKQLQEP+EIEVWNDNAGDKKPSPDVLI KG LPVKHLA   P AP                                                                  XXXXXXXXXXXX                             EGD+ AT+TDDD LSSIAGLSA S  GK+N+LSVQELGA MSQ LEGF++REEL KI + QGIINEGFGQRGAFA IQE+HLVGHPIY PRGARKR+L LAEL+RLQM+AE   VT  ++++E   P    A E GYT DGV FFDTLAAM  SLEED+ K EL   NE
Sbjct:  130 VHRHKTLKDDDLVPDDSVDNGEQEEVEDVLGGEGLDLSYLWVVDAGKVLSRSNKSTSDTEGSSHTA-KGGTTTDSEQEAEQRRPGDDRVSGNGDAEGVENEQGSGAHAAKKEGDGRLPLDKASGKKSRDATNGGGENLVGSLELGDGGGENAQPSIAQVDTKAEKRARNTEKRGEAGGGRAGDNGDARPEQPQVKKRKGRLVPGSLVLTSVSAADLPDTEKGVFSKQ-DPYLVARWGEQEVRTSAKRDSGKACSWVKEEVALLVRTKKQLQEPIEIEVWNDNAGDKKPSPDVLIGKGSLPVKHLASADPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQARREGDRTATETDDDALSSIAGLSAWSIQGKRNHLSVQELGAVMSQTLEGFNIREELGKIEFVQGIINEGFGQRGAFAYIQEEHLVGHPIYAPRGARKRLLALAELIRLQMRAEKEKVTAVEDIAEDGSPFWSPALERGYTTDGVAFFDTLAAMNYSLEEDRAKLELTKTNE 715
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10488.684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHZ2_ECTSI3.030e-13749.49C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 197..305
e-value: 0.0048
score: 26.1
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 195..396
e-value: 7.0E-10
score: 41.0
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 195..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10488contigS-firma_F_contig10488:389..4794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10488.684.1mRNA_S-firma_F_contig10488.684.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10488 389..4794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10488.684.1 ID=prot_S-firma_F_contig10488.684.1|Name=mRNA_S-firma_F_contig10488.684.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=556bp
VHRHKTLKDEDLIPDDTVDNGEQAEVEEVVTGQGLDLSYLWVVDAKNLGQ
RSRPSTSNAKRSSSTATKKQTTPTTDAQGRKQQTSEDERSGDGGDEETEK
AQGSGSDSASPKQVGGETQGPTKSGGGESLVEPGPDGERSPPGGARDASA
GGEKKAKKRTHPKGGGGNRGSAGGDGEQQQDEQQQQKKRKGRLVPGSLLL
TSLSVSDLPNTEKGVFSKQQDPYLVVKWGGQEARTSAKRDSGRDCSWSNE
ELALIVRTKKQLQEPVEIEVWNDNAGDKKPSPDVLIAKGPLPVKHLALPQ
PTAPASATDGNGSMKGGGRDNHTDDERGREGVVLNVDLMHGGGWGRKKKN
ASAGVITLTLEYIPPRRKQTKAEKEEDDAAAARGRGEEGDQAATDTDDDG
LSSIAGLSALSSLGKKNNLSVQELGAAMSQALEGFDVREELNKIGYAQGI
INEGFGQRGAFADIQEKHLVGHPIYVPRGARKRILTLAELVRLQMKAEAS
GVTKAKEVSEADGPTDVRAFEGGYTVDGVVFFDTLAAMKLSLEEDKIKAE
LAIANE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom