prot_S-firma_F_contig10475.667.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10475.667.1
Unique Nameprot_S-firma_F_contig10475.667.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length153
Homology
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BLAST of mRNA_S-firma_F_contig10475.667.1 vs. uniprot
Match: D7G251_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G251_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 1.200e-85
Identity = 135/150 (90.00%), Postives = 136/150 (90.67%), Query Frame = 0 
Query:    3 RGRAASVTESRGASPMTPEASPPVQDQVTAAQRAKQEAHNDRIVATFNSVMLADGLKVLKHHRRSSKKAASRVIRFVPDYGGALVWDKPLRQPGAKASRVPLDAITQVELEARIVWISAGDERVGFETSKTEDADLMYQAICILVDRCHA 152
            R RA S TES  A    P  SP V+DQ T AQRAKQEAHNDRIVATFNSVMLADGLKVLKHHRRSSKKAASRVIRFVPDYGGALVWDKPLRQPGAKASRVPLDAITQVELEARIVWISAGDERVGFETSKTEDADLMYQAICILVDRCHA
Sbjct:   35 RERAGSPTESPAARESAP--SPVVEDQATIAQRAKQEAHNDRIVATFNSVMLADGLKVLKHHRRSSKKAASRVIRFVPDYGGALVWDKPLRQPGAKASRVPLDAITQVELEARIVWISAGDERVGFETSKTEDADLMYQAICILVDRCHA 182
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BLAST of mRNA_S-firma_F_contig10475.667.1 vs. uniprot
Match: A0A6H5JPJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ4_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 9.320e-47
Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 0 
Query:   37 KQEAHNDRIVATFNSVMLADGLKVLKHHRRSSKKAASRVIRFVPDY--GGALVWDKPLRQPGAKASRVPLDAITQVELEARIVWISAGDERVGFETSKTEDADLMYQAICILVDRCHA 152
            +++ H+D +VA FN VMLADGLKVLK   RS K A SRVIRFVPDY  GG+LVW KP+   GAK SRVPLD  TQVELEA IVWISA DERVG ETSK EDA++MY+AICILVDRC+A
Sbjct:  227 REKVHDDHVVAVFNRVMLADGLKVLKQ-LRSCKAACSRVIRFVPDYLFGGSLVWHKPVNPQGAKNSRVPLDVTTQVELEACIVWISASDERVGCETSKLEDAEIMYEAICILVDRCNA 343
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10475.667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G251_ECTSI1.200e-8590.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JPJ4_9PHAE9.320e-4771.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10475contigS-firma_F_contig10475:1792..4634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10475.667.1mRNA_S-firma_F_contig10475.667.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10475 1490..5037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10475.667.1 ID=prot_S-firma_F_contig10475.667.1|Name=mRNA_S-firma_F_contig10475.667.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=153bp
MGRGRAASVTESRGASPMTPEASPPVQDQVTAAQRAKQEAHNDRIVATFN
SVMLADGLKVLKHHRRSSKKAASRVIRFVPDYGGALVWDKPLRQPGAKAS
RVPLDAITQVELEARIVWISAGDERVGFETSKTEDADLMYQAICILVDRC
HA*
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