prot_S-firma_F_contig1037.525.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1037.525.1
Unique Nameprot_S-firma_F_contig1037.525.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length148
Homology
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BLAST of mRNA_S-firma_F_contig1037.525.1 vs. uniprot
Match: A0A835YQE8_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQE8_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.260e-33
Identity = 66/135 (48.89%), Postives = 92/135 (68.15%), Query Frame = 0 
Query:   10 VQNQFAVVLSWDEVRALQKLYGDPDTGGIDFMKFAVALGRSPGHGPEKARRAYNFLPKHTTEYDLNAIEKKIMHKLEDRCEVAGNYQYQWARRMLCDPTSTLAGGMDKEQLKLRLSGLLGVELSDGEMDALFRKH 144
            V++QFA+ L+ +E+ ALQ  Y     G +DF++FA AL ++P +G ++ R  +NFLP      DL  +E+ +  K+ DR  +AGNYQYQ A RMLCD    LAGGM +E LKLR+S LLGVE++D E+DALF K+
Sbjct:    2 VESQFALALTVEEMVALQTRYPGNQPGTVDFLQFAEALSKTPQYGLDRTRGCFNFLPASKGNRDLQGLERDMRQKITDRLHLAGNYQYQSAYRMLCDANYQLAGGMGREDLKLRVSELLGVEINDREVDALFSKY 136
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1037.525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YQE8_9STRA1.260e-3348.89EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1037contigS-firma_F_contig1037:5850..6894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1037.525.1mRNA_S-firma_F_contig1037.525.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1037 5850..6894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1037.525.1 ID=prot_S-firma_F_contig1037.525.1|Name=mRNA_S-firma_F_contig1037.525.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=148bp
MSLEEFKRQVQNQFAVVLSWDEVRALQKLYGDPDTGGIDFMKFAVALGRS
PGHGPEKARRAYNFLPKHTTEYDLNAIEKKIMHKLEDRCEVAGNYQYQWA
RRMLCDPTSTLAGGMDKEQLKLRLSGLLGVELSDGEMDALFRKHADP*
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