prot_S-firma_F_contig10355.506.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10355.506.1
Unique Nameprot_S-firma_F_contig10355.506.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length386
Homology
BLAST of mRNA_S-firma_F_contig10355.506.1 vs. uniprot
Match: A0A6H5L7S3_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7S3_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 3.270e-102
Identity = 234/381 (61.42%), Postives = 270/381 (70.87%), Query Frame = 0
Query:    5 EEEISALLLRVSASEGRSRRIAEDKEAQLREVEKAAVKSLEAAERRRVEWEEKASTMAARLRERDAEGARRDRLVKELEARLARARVEASEAQENKTSELRRLAGELGVTRKALSDREARGRSEVERLGRRLRDEEGKAAAAAAKLKTLEQRARFLETGAAAARQRAEAGARTEKNVSERLAEAETERACQEVTVTTLRAQLEELRRGEAAGAAALREAAKLKKLLEGALRQPASTSNRSSDTESXXXXXXXXXXXXAPATATAAAEGAKDGRRGHGEDASTGHHRGGTTDSLVELAERLLRQAGGVDRELEAVREALTAARNENKTLRARDQDAAELRSLLEQKRGVSAQLARGAEAARARAECADIAIGEVKAEAASLR 385
            EEEISALLLRV ASE RSRR++EDK  +LREVE+AAVKSLEAAERRR EWE KAS +AARLRER+AEGAR+DR+VK+LE RL RA+ +ASE QE + SELRR+AGEL V RKALSDREAR R E  RL RRLR++E KA    A L+ LEQRA+FLETG  AARQRAEA AR EK VSERLAEAETERACQEV VTTL+AQLEELRRG AAG AALRE AKL+K+LEGA  +   T                         A     G +D  R  G   S     G   +SLVELAE+L  +   + REL++VR+AL  AR     L AR++DAAELRSLLEQKRGVSA+LA GAEAAR RAE A+    ++ A+  SLR
Sbjct:  767 EEEISALLLRVGASESRSRRLSEDKAERLREVEEAAVKSLEAAERRRAEWENKASAIAARLREREAEGARKDRVVKDLEGRLGRAQAQASEVQEREGSELRRVAGELEVMRKALSDREARAREETGRLERRLREDEKKACKTTAGLRKLEQRAKFLETGIVAARQRAEAAARKEKEVSERLAEAETERACQEVAVTTLKAQLEELRRGAAAGDAALRETAKLRKILEGAALRHVGTQ--------------------PVVAADCGKSGRRDDTRSGGGSTSKNGRGGAGGESLVELAEKLQGRTDELGRELDSVRQALAMARERFPALLAREKDAAELRSLLEQKRGVSARLASGAEAARVRAERAESQAKKMVADGVSLR 1127          
BLAST of mRNA_S-firma_F_contig10355.506.1 vs. uniprot
Match: D7G3L4_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L4_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 7.210e-100
Identity = 232/387 (59.95%), Postives = 273/387 (70.54%), Query Frame = 0
Query:    6 EEISALLLRVSASEGRSRRIAEDKEAQLREVEKAAVKSLEAAERRRVEWEEKASTMAARLRERDAEGARRDRLVKELEARLARARVEASEAQENKTSELRRLAGELGVTRKALSDREARGRSEVERLGRRLRDEEGKAAAAAAKLKTLEQRARFLETGAAAARQRAEAGARTEKNVSERLAEAETERACQEVTVTTLRAQLEELRRGEAAGAAALREAAKLKKLLEGALRQPASTSNRSSDTESXXXXXXXXXXXXAPATATAAAEGAKDGRRGHGEDASTGHHRGGTT-------DSLVELAERLLRQAGGVDRELEAVREALTAARNENKTLRARDQDAAELRSLLEQKRGVSAQLARGAEAARARAECADIAIGEVKAEAASLR 385
            EEISALLLRV ASE RSRR++EDK  +LREVE+AAVKSLEAAERRR EWE KAS +AARLRER+AEG R+DR+VK+LE RL RA  + SE QE + SELRR+AGEL V RKALSDREAR R E  RL RRLR+EE KA    A L+ LEQ A+FLETG  AARQRAEA AR EK VSERLAEAETERACQE+ VTTL+AQLEELRRG AAG AALREAAKL+ +LEGA  +   T                            AA+  K GRR   +D ++G    G         + LVELA++L  +   +D+EL++VR+AL   R EN+ L AR++DAAELRSLLEQKRGVSA+LA GAEAARARAE A+    ++ A+  SLR
Sbjct:  774 EEISALLLRVGASESRSRRLSEDKAERLREVEEAAVKSLEAAERRRAEWENKASAIAARLREREAEGTRKDRVVKDLEGRLGRAHAQTSEVQEREGSELRRVAGELEVMRKALSDREARAREETGRLERRLREEEKKACKNTAGLRKLEQHAKFLETGVVAARQRAEAAARKEKEVSERLAEAETERACQEIAVTTLKAQLEELRRGAAAGDAALREAAKLRNILEGAALRHMGTQP------------------------VVAADCGKSGRR---DDTTSGGGSSGKNXXXXXXGEGLVELAKKLQGRTDELDQELDSVRKALAMGREENQALLAREKDAAELRSLLEQKRGVSARLASGAEAARARAERAESQAEKMVADRVSLR 1133          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10355.506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7S3_9PHAE3.270e-10261.42PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3L4_ECTSI7.210e-10059.95PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..170
NoneNo IPR availableCOILSCoilCoilcoord: 79..106
NoneNo IPR availableCOILSCoilCoilcoord: 26..64
NoneNo IPR availableCOILSCoilCoilcoord: 315..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10355contigS-firma_F_contig10355:288..4970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10355.506.1mRNA_S-firma_F_contig10355.506.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10355 288..4970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10355.506.1 ID=prot_S-firma_F_contig10355.506.1|Name=mRNA_S-firma_F_contig10355.506.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=386bp
VREREEEISALLLRVSASEGRSRRIAEDKEAQLREVEKAAVKSLEAAERR
RVEWEEKASTMAARLRERDAEGARRDRLVKELEARLARARVEASEAQENK
TSELRRLAGELGVTRKALSDREARGRSEVERLGRRLRDEEGKAAAAAAKL
KTLEQRARFLETGAAAARQRAEAGARTEKNVSERLAEAETERACQEVTVT
TLRAQLEELRRGEAAGAAALREAAKLKKLLEGALRQPASTSNRSSDTEST
AAAAAATTTDEAPATATAAAEGAKDGRRGHGEDASTGHHRGGTTDSLVEL
AERLLRQAGGVDRELEAVREALTAARNENKTLRARDQDAAELRSLLEQKR
GVSAQLARGAEAARARAECADIAIGEVKAEAASLR*
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