prot_S-firma_F_contig1033.475.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1033.475.1
Unique Nameprot_S-firma_F_contig1033.475.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length305
Homology
BLAST of mRNA_S-firma_F_contig1033.475.1 vs. uniprot
Match: D7G392_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G392_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 3.600e-78
Identity = 152/277 (54.87%), Postives = 196/277 (70.76%), Query Frame = 0
Query:    1 MGMSRLPGVSAAYEGRP--------FRTVEKRMRLRVNEANRNPMRDTARVCAMESLGPQVRCVGKALTSDDSGGGNSTSPS----------FLAADITNTCSTSRGFLQQLKAKFGPVKFDRVFLDYFWMPDSIVWLNRSYMANNGGLVTNLVKMTEVNTRLLREDFEIILPINRAILVLLLPRFSELDEHFTIEFLVGEGLEDLKQSHLALQADALIPEEIMQEVYGKGRERQVSDMLGVENPTQEMTAVLLKYGVELENLRHARFLRLTRRETP 259
            +GM+R+    A Y+ R         F  VE+ +R  VNEAN NP+RDTARV AME+LG +VRC+ K  T  +S   NS S            FLA DITNT   SRGFL++++ K+  + FD V LD++W+PDS+VWLN+ YMAN+GGL+ NLV+MT+  T+LL +DFEI+LPIN+A   LLLP FS+L+ HFT+EFLVGE LE LK+SHLAL+AD LIPE++MQ VYGK  ERQVS MLGV+ PT ++ AVLLKYGV  E+  +ARFL+L+R   P
Sbjct: 1101 LGMTRV----AEYDSRGGLTKGMKRFDLVERMVRDDVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNT-GASRGFLRKIEEKWEKITFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTK--TQLLGDDFEIMLPINQAFFELLLPHFSDLERHFTVEFLVGERLEHLKRSHLALEADDLIPEDVMQHVYGKEPERQVSRMLGVKQPTADVAAVLLKYGVAAEHFCYARFLKLSRNPPP 1370          
BLAST of mRNA_S-firma_F_contig1033.475.1 vs. uniprot
Match: A0A6H5K5F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F0_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 9.490e-75
Identity = 139/248 (56.05%), Postives = 176/248 (70.97%), Query Frame = 0
Query:   16 RPFRTVEKRMRLRVNEANRNPMRDTARVCAMESLGPQVRCVGKALTSDDSGGGNSTSP----SFLAADITNTCSTSRGFLQQLKAKFGPVKFDRVFLDYFWMPDSIVWLNRSYMANNGGLVTNLVKMTEVNTRLLREDFEIILPINRAILVLLLPRFSELDEHFTIEFLVGEGLEDLKQSHLALQADALIPEEIMQEVYGKGRERQVSDMLGVENPTQEMTAVLLKYGVELENLRHARFLRLTRRETP 259
            R F+T+EK++R +V E N NP+RDT RV A E+ G +V CV K   S   G      P      L  D++NT + SRG L+    K+G VKF++V LD+FW+PDS  WLN++YMAN+GGL+ NL+ MT+  TRLL +DFE+ILPINR  L LLLP FSELD+HFT+ FLVG+GL DLK+SHLALQA  LIP++IM  VYGK +ERQ+S +LGV+ PTQEM  VL  +GVE  N  HARFLRLT+   P
Sbjct:  458 RRFKTLEKKLRNKVTEGNMNPLRDTIRVLATETQGYRVSCVSKVSVSRGPGSSAKGRPVSRRHLLETDMSNT-TASRGLLRS--GKWGDVKFEKVLLDHFWLPDSETWLNKNYMANDGGLIRNLISMTKPETRLLSDDFEVILPINRGFLELLLPHFSELDKHFTVAFLVGQGLNDLKKSHLALQAGDLIPDDIMMGVYGKNKERQLS-ILGVKEPTQEMVKVLRNHGVEPWNFCHARFLRLTKSAGP 701          
BLAST of mRNA_S-firma_F_contig1033.475.1 vs. uniprot
Match: D8LN97_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN97_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 2.000e-63
Identity = 116/210 (55.24%), Postives = 152/210 (72.38%), Query Frame = 0
Query:   16 RPFRTVEKRMRLRVNEANRNPMRDTARVCAMESLGPQVRCVGKALTSDDSG-----GGNSTSPSFLAADITNTCSTSRGFLQQLKAKFGPVKFDRVFLDYFWMPDSIVWLNRSYMANNGGLVTNLVKMTEVNTRLLREDFEIILPINRAILVLLLPRFSELDEHFTIEFLVGEGLEDLKQSHLALQADALIPEEIMQEVYGKGRERQVSD 220
            R F+T+EK++R +V E N NP+RDT RV A E+ G +V CV K   S   G     G  ++    L  D++NT + SRG L+ +K K+G VKF++V LD+FW+PDS  WLN++YMAN+GGL+ NL+ MT+  TRLL +DFE+ILPINR  L LLLP FS+LD+HFT+ FLVG+GL DLK+SHLALQA  LIP++IM  VYGK +ERQ  D
Sbjct:  458 RRFKTLEKKLRNKVTEGNMNPLRDTVRVLATETQGYRVSCVSKVSVSRGPGSSAAKGRPASRRHLLETDMSNT-TASRGLLRSVKGKWGDVKFEKVLLDHFWLPDSETWLNKNYMANDGGLIRNLISMTKPETRLLSDDFEVILPINRGFLELLLPHFSKLDKHFTVAFLVGQGLNDLKKSHLALQAGDLIPDDIMMGVYGKNKERQDPD 666          
BLAST of mRNA_S-firma_F_contig1033.475.1 vs. uniprot
Match: A0A835YWD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD2_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.710e-45
Identity = 97/250 (38.80%), Postives = 142/250 (56.80%), Query Frame = 0
Query:   18 FRTVEKRMRLRVNEANRNPMRDTARVCAMESLGPQVRCVG-------KALTSDDSGGGNSTSPSFLAADITNTCSTSRGFLQQLKAKFGPVKFDRVFLDYFWMPDSIVWLNRSYMANNGGLVTNLVKMTEVNTRLLREDFEIILPINRAILVLLLPRFSELDEHFTIEFLVGEGLEDLKQSHLALQADALIPEEIMQEVYGKGRERQVSDMLGVENPTQEMTAVLLKYGVE------LENLRHARFLRLT 254
            F   E  +R  V++ N N MRDTAR+ A+ESLG  V  V        + +  D   GG  T P FL        S SRGF++ +  K+  V F  V+LDY+W+PDS+ WL + YMANN G++ NL+KM E+   +L   F+++LP+N A++  L P   +L  +F + F+ G+  E ++  HLA+QAD+LIP  +M  VY K ++RQ+ DMLG++         +LK  V         +L+  RFLRLT
Sbjct:   13 FEAAEAEIRHAVSDCNCNLMRDTARILALESLGCDVFAVSLVDELAWERIVPD---GGADTGPRFLNTSFATVGSRSRGFVECVLLKWPNVIFQSVYLDYYWLPDSVAWLQKGYMANNAGVIDNLIKMKEIG--ILARGFDVVLPVNTALVQCLEPLVKKLRANFAVHFISGDT-EAIRPHHLAVQADSLIPPHVMSGVYCKNQQRQIDDMLGIKGSAAARALTILKRLVSGRTLARTPDLQDVRFLRLT 256          
BLAST of mRNA_S-firma_F_contig1033.475.1 vs. uniprot
Match: A0A6H5LE14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE14_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 4.690e-27
Identity = 91/248 (36.69%), Postives = 119/248 (47.98%), Query Frame = 0
Query:    1 MGMSRLPGVSAAYEGRP--------FRTVEKRMRLRVNEANRNPMRDTARVCAMESLGPQVRCVGKALTSDDSGGGNSTSPS----------FLAADITNTCSTSRGFLQQLKAKF---------------GP--------------------------------------------------------VKFDRVFLDYFWMPDSIVWLNRSYMANNGGLVTNLVKMTEVNTRLLREDFEIILPINRA 159
            +GM+R+    A Y+ R         F  VE+ +R  VNEAN NP+RDTARV AME+LG +VRC+ K  T  +S   NS S            FLA DITNT   SRGFL++++A +               GP                                                        V FD V LD++W+PDS+VWLN+ YMAN+GGL+ NLV+MT+  T+LL +DFEIILPIN+ 
Sbjct: 1100 LGMTRV----AEYDSRGGLTKGMKRFDLVERMVRDDVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNT-GASRGFLRKIEASYSLLLVVGRIAVIIRPGPCCQPIPGSVSPIFQDEHDPGADDKREVFARRHCVDGMYTACLVWALCTDVQEKWENVTFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTK--TQLLSDDFEIILPINQG 1340          
BLAST of mRNA_S-firma_F_contig1033.475.1 vs. uniprot
Match: A0A6H5KX64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX64_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.750e-26
Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 0
Query:  174 HFTIEFLVGEGLEDLKQSHLALQADALIPEEIMQEVYGKGRERQVSDMLGVENPTQEMTAVLLKYGVELENLRHARFLRLTRRETP 259
            HFT+EFLVGE LE LK+SHLAL+AD LIPE++MQ VYGK  ERQVS MLGV+ PT ++ AVLLKYGV  E+  +ARFL+L+R   P
Sbjct:    9 HFTVEFLVGERLEHLKRSHLALEADDLIPEDVMQHVYGKEPERQVSRMLGVKQPTADVAAVLLKYGVAAEHFCYARFLKLSRNPPP 94          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1033.475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G392_ECTSI3.600e-7854.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5F0_9PHAE9.490e-7556.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN97_ECTSI2.000e-6355.24EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A835YWD2_9STRA4.710e-4538.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5LE14_9PHAE4.690e-2736.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX64_9PHAE2.750e-2666.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 291..304
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..290
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1033contigS-firma_F_contig1033:11964..17938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1033.475.1mRNA_S-firma_F_contig1033.475.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1033 11423..18013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1033.475.1 ID=prot_S-firma_F_contig1033.475.1|Name=mRNA_S-firma_F_contig1033.475.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=305bp
MGMSRLPGVSAAYEGRPFRTVEKRMRLRVNEANRNPMRDTARVCAMESLG
PQVRCVGKALTSDDSGGGNSTSPSFLAADITNTCSTSRGFLQQLKAKFGP
VKFDRVFLDYFWMPDSIVWLNRSYMANNGGLVTNLVKMTEVNTRLLREDF
EIILPINRAILVLLLPRFSELDEHFTIEFLVGEGLEDLKQSHLALQADAL
IPEEIMQEVYGKGRERQVSDMLGVENPTQEMTAVLLKYGVELENLRHARF
LRLTRRETPPSSGKHDVTRKPTGVNIFSRLLAGLCVFVGFRRKETIGRKR
ARRA*
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