prot_S-firma_F_contig10301.451.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10301.451.1
Unique Nameprot_S-firma_F_contig10301.451.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length746
Homology
BLAST of mRNA_S-firma_F_contig10301.451.1 vs. uniprot
Match: A0A6H5KRZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ3_9PHAE)

HSP 1 Score: 460 bits (1183), Expect = 1.850e-146
Identity = 376/766 (49.09%), Postives = 444/766 (57.96%), Query Frame = 0
Query:   29 GSDEVRGENNS--SLLLSLEKEVLALRQSE-------SSLIAELQRRCDKMIELEVHLDEERARANRLQRERTEEDEALSGELRDIMATVALDSANSLNPAAGAADASK-PTNGATTTAAATLTAGEPNGAPDAAGESAEWKEGEAADRPAEQQQPTAESPSVSGGAATGAAAGASGFFAEWRARRARGARA--DDEKGNSTGAKAEPTPAATE----EKEEEVERRGDVGGEGGELVTPKG--RSREQAAGALRTRVVELELQRAKAEDEMREKMDRSIRLEVQVEQLKNVVQSLSHASAQEESPGWRGKDSKRATGKTPGMIDLDPLLRGVPGVDPHVLLLLHRSPWADGVIEGIRKEETCFEWQGRDSRGEWSSKLCNLPAELSSLPFHS-TGLRPPPSPXXXXLXXXXXXXXXXXSGDGAASATRKRAPSAGNGDVETSEHE----GG-------AGGLKEKIGEAVAALGAAGLGLGGSRGG-PGARTVTDEGVTLRFELDNVGLPSEHWEWVGGWMVDSETEASADQDGWIYGRAAADISEIALGLKPASSRNIDDSYSSSNGSGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSMSGSQLESEPASPSSPAAQQTDAESKVGQRREKDRAKDEAGAAATGSDGXXXXXEEAAADSEASPDRDGGEGL----------------W-LRRRRLVRLRMVRTVDGARESTTSVLEMMRRLCSLEVLVRKLSSQVVAQQRQV 746
            G +   G  NS  SLL SLEKEVL LR+S        +SL+AELQRRCDK+IELEV+LD+ERARA+RL RER EE+EALSGELRDIMATV + S     PAA        PT+              P    D + +S   +  + A++ A  + P  E P         A A ASG F+EWR  R RG +A  DD  GN+ G  +  T AA+E    E++E+++   D  G  G+  +  G   +REQA GALR RVVELELQRA+A DEMREK DRSIRLEVQVEQLKN+VQSLSHAS++EE+  W G+ S  AT +T   +DLDPLLR VPGVDP VLLLLHR+PWAD V+EGIRKEE+CFEWQG+DSRG WSS+L   P ELSSLP H   G  PPP  XXXX X       XXX         R R+P+       T++H     GG       AGGL+EKIG A+AA+ AAG GLGG  GG PG R VTDEGVT RFELD+VGLPS HWEWVGGWMVDSETEAS+DQDGWIYGR+ ++ISEIALG   + S  +  S SS   S S                                  XXXXXXXXXXXXX    SG+  + + AS                                             +AD++   D  G                    W LRRRRLVRLRMVR VDGAR+ST SVLEM RRL S+E+LVRKLS QVV QQRQ+
Sbjct:   12 GPEGAEGAENSNHSLLQSLEKEVLLLRKSRDEQEETTASLLAELQRRCDKVIELEVNLDQERARADRLARERMEEEEALSGELRDIMATVTVGSDVFGTPAAAXXXXXXXPTS--------------PAAGNDLSFDSESIERQQVANKTAVDKDPGQEPPXXXXXXXXXAIASASGIFSEWRLGRVRGGKASDDDRNGNNAGTGSGKTGAASETMTAEEQEKLKDSADGPGVDGQKSSSNGGGSAREQAVGALRARVVELELQRAEAADEMREKTDRSIRLEVQVEQLKNIVQSLSHASSREETQAW-GQGSS-ATTRTQETVDLDPLLRDVPGVDPSVLLLLHRTPWADVVLEGIRKEESCFEWQGKDSRGAWSSRLGAFPTELSSLPLHHLAGPHPPPQXXXXXXXLSSLPQSXXXXXXXXXXXXRSRSPTLALTGFVTADHARCEAGGQAGSDARAGGLREKIGGAMAAVAAAGRGLGGGIGGAPGWRMVTDEGVTFRFELDDVGLPSHHWEWVGGWMVDSETEASSDQDGWIYGRSPSEISEIALGRTSSHSNGMRSSSSSPEISSS-RSAADATAGAAGVGDGAREPEASSENTQDGDESXXXXXXXXXXXXXXXXXSGNYSDGDIAS---------------------------------------------SADNKGEEDAKGPRXXXXXXXXXXXXXXXXXXWGLRRRRLVRLRMVRMVDGARDSTISVLEMFRRLSSMEILVRKLSRQVVTQQRQM 715          
BLAST of mRNA_S-firma_F_contig10301.451.1 vs. uniprot
Match: D7FLV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV6_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 1.130e-78
Identity = 198/378 (52.38%), Postives = 232/378 (61.38%), Query Frame = 0
Query:   28 MGSDEVRG--------ENNSSLLL-SLEKEVLALRQSE-------SSLIAELQRRCDKMIELEVHLDEERARANRLQRERTEEDEALSGELRDIMATVALDSANSLNPAAGAADASKPTNGATTTAAATLTAGEPNGAPDAAGESAEWKEGEAADRPAEQQQPTAESPSVSGGAATGAAAGASGFFAEWRARRARGARA--DDEKGNSTGAKAEPTPAATEEKEEEVERRGDVGGEGGELVTPKGR-------SREQAAGALRTRVVELELQRAKAEDEMREKMDRSIRLEVQVEQLKNVVQSLSHASAQEESPGWRGKDSKRATGKTPGMIDLDPLLRGVPGVDPHVLLLLHRSPWADGVIEGIRKEETCFEWQGRD 380
            M SD+ RG        EN + LLL SLE EVL+LR+S        +SL+AELQRRCDK+IELEV+LD+ERARA+RL RERTEE+EALSGELRDIMATV + S  S  PAA                A       P    D   +S   +  +AAD+ A  ++P    P         A A ASG F+EWR  R RG RA  DD  GN+ G        A+E K                    KG        +REQAAGALR RVVELELQRA+A DEMREK DRSIRLEVQVEQLKN+VQSLSHAS++EE+ GW G+ S   T +  G +DLDPLLR VPGV+P VLLLLHR+PWAD V+EGIRKEE CFEWQG+D
Sbjct:    1 MASDDGRGDAGGAEGAENGNHLLLQSLETEVLSLRKSRDEQEETTASLLAELQRRCDKVIELEVNLDQERARADRLARERTEEEEALSGELRDIMATVTVGSDVSDTPAA----------------AXXXXXXXPAAGNDLPFDSESIERQQAADKTAVGREPGQAPPEXXXXXXXXAIASASGIFSEWRLGRVRGGRATDDDRNGNNAGTGGGKPGPASETKXXXXXXXXXXXXXXXXXXXQKGSXXXXXXXAREQAAGALRARVVELELQRAEAADEMREKTDRSIRLEVQVEQLKNIVQSLSHASSREETQGW-GQGSATTT-RIQGTVDLDPLLRDVPGVNPSVLLLLHRTPWADVVLEGIRKEEACFEWQGKD 360          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10301.451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRZ3_9PHAE1.850e-14649.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLV6_ECTSI1.130e-7852.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..97
NoneNo IPR availableCOILSCoilCoilcoord: 261..295
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..746
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.614

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10301contigS-firma_F_contig10301:471..4497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10301.451.1mRNA_S-firma_F_contig10301.451.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10301 471..4497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10301.451.1 ID=prot_S-firma_F_contig10301.451.1|Name=mRNA_S-firma_F_contig10301.451.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=746bp
VRFDLLAAVFAARARLCLAMMGSDEAMMGSDEVRGENNSSLLLSLEKEVL
ALRQSESSLIAELQRRCDKMIELEVHLDEERARANRLQRERTEEDEALSG
ELRDIMATVALDSANSLNPAAGAADASKPTNGATTTAAATLTAGEPNGAP
DAAGESAEWKEGEAADRPAEQQQPTAESPSVSGGAATGAAAGASGFFAEW
RARRARGARADDEKGNSTGAKAEPTPAATEEKEEEVERRGDVGGEGGELV
TPKGRSREQAAGALRTRVVELELQRAKAEDEMREKMDRSIRLEVQVEQLK
NVVQSLSHASAQEESPGWRGKDSKRATGKTPGMIDLDPLLRGVPGVDPHV
LLLLHRSPWADGVIEGIRKEETCFEWQGRDSRGEWSSKLCNLPAELSSLP
FHSTGLRPPPSPTPPPLQRPTKSPSPPSSGDGAASATRKRAPSAGNGDVE
TSEHEGGAGGLKEKIGEAVAALGAAGLGLGGSRGGPGARTVTDEGVTLRF
ELDNVGLPSEHWEWVGGWMVDSETEASADQDGWIYGRAAADISEIALGLK
PASSRNIDDSYSSSNGSGSPAAKQSASSGESAAGSLEAAGAPPPPSQALE
SGAKPSSSPPPPPQQQERSMSGSQLESEPASPSSPAAQQTDAESKVGQRR
EKDRAKDEAGAAATGSDGDDGEGEEAAADSEASPDRDGGEGLWLRRRRLV
RLRMVRTVDGARESTTSVLEMMRRLCSLEVLVRKLSSQVVAQQRQV
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