prot_S-firma_F_contig1030.449.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1030.449.1
Unique Nameprot_S-firma_F_contig1030.449.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length321
Homology
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: D7FI10_ECTSI (DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI)

HSP 1 Score: 606 bits (1562), Expect = 5.350e-202
Identity = 284/320 (88.75%), Postives = 304/320 (95.00%), Query Frame = 0
Query:    1 MMKAGKSVNVGHHIPYVMCKIEGATSPAERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSNTAGGDDGDDWAFTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVFAWDRKKPVNSPADLKPGLVCPNAACGAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRSTGVMGVACPGRGCQGRLAQEYPDKALYDQLKFFETLFDVDRAQTKVSELFNLKAAELPVSAEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVFTSHALPRAIKAS 320
            MMKAGKSVNVGHHIPYVMCKIEGATSPAERARHPDD+LRS G+LEVDVEWYL+QQIVPPVSRLCEPIEGTSMA+LAEKMGLD SKFTSH+N AGGDDGDDWAFTPTSKLPDAERFRGVEPL+MTCRACH+QA+FQGVF+WDRKK VN PADL+PGL+CPN+ACGAYYWGA +EAACVSTLYQRLTLAVR H++VYYQT+LRCDDSSCGL TRSTGVMGVACP +GCQGRL QEYPDK LYDQLK+FETLFDVDRAQTKVSELFN K  +LPVS EHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVFTSHALP AIK+S
Sbjct: 1293 MMKAGKSVNVGHHIPYVMCKIEGATSPAERARHPDDVLRSGGKLEVDVEWYLNQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFTSHANAAGGDDGDDWAFTPTSKLPDAERFRGVEPLKMTCRACHEQAEFQGVFSWDRKKAVNGPADLRPGLMCPNSACGAYYWGAGSEAACVSTLYQRLTLAVRRHLKVYYQTHLRCDDSSCGLLTRSTGVMGVACPAKGCQGRLVQEYPDKTLYDQLKYFETLFDVDRAQTKVSELFNFKETDLPVSPEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVFTSHALPPAIKSS 1612          
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA)

HSP 1 Score: 312 bits (799), Expect = 5.860e-93
Identity = 161/320 (50.31%), Postives = 211/320 (65.94%), Query Frame = 0
Query:    1 MMKAGKSVNVGHHIPYVMCKIEGATSPAERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSN--TAGGDDGDDWAFTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVF---------AWDRKKPVNSPAD--LKPGLVCPNAACGAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRSTGVMGVACPGRGCQGRLAQEYPDKALYDQLKFFETLFDVDRAQTKVSELFNLKAAELPVSAEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSV 307
            MMKAGK VNVG HI YV+C+ EGA + AERA  PDD+  S G+L+VDVEWYL+QQI+PPV+RLCEPIEGTS+A LAE++GLD S+F    N  +AG +D + W FTP  ++ D+ERF   E L++ C  C+Q+ADF GV+         A + K  V S A   L+ GL+CPN +C A YWGA N A+C + L+ R+TL VR H++ YY   L CDD+ C  R+R   V+  AC  RGC G +  EY +KAL+ QLKF ETLFDV RA+ K  E   +    LP+   H ++L L+  + +  V S+ YNWIRPSLWS +
Sbjct: 1324 MMKAGKPVNVGDHIEYVICEKEGAKAAAERAFLPDDVKHSEGELKVDVEWYLTQQILPPVARLCEPIEGTSVATLAERLGLDKSRFGQGGNGGSAGNED-EAWGFTPMCRMEDSERFAACEALKVRCSHCNQEADFPGVYCEALVAVAAAGESKGGVASTASGGLRSGLLCPNMSCQALYWGAPNAASCFARLFNRVTLTVRLHVKKYYDCWLLCDDTGCNRRSRQQSVVATACLARGCHGHMGMEYSEKALHTQLKFLETLFDVRRAKAKKMEAGTVP---LPLPDGHVRVLDLLHEQTRQIVSSTAYNWIRPSLWSMI 1639          
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: A0A7S2V4V6_9STRA (DNA-directed DNA polymerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V6_9STRA)

HSP 1 Score: 262 bits (670), Expect = 2.160e-83
Identity = 140/301 (46.51%), Postives = 194/301 (64.45%), Query Frame = 0
Query:   14 IPYVMCKIEGATSPAERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKF----TSHSNTAGGDDGDDWAFTPTSKLPDAERFRGVEPLRMTCRAC-HQQADFQGVFAWDR-KKPVNSPADLKPGLVCPNAACGAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRSTGVMGVACPGRGCQGRLAQEYPDKALYDQLKFFETLFDVDRAQTKVSELFNLKAAELPVSAEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVF 308
            +P V C +      A++ARHP+ +  SN QL+VD+EWYLSQQI+PP++RLCEPIEGTS   LA ++GLD SKF        +++ GDD D  AFTP SK+ DAERFR V  L++ C  C  ++A+F GV+  D+ ++PV S      GL CP   CG  +WGA N  AC S L+ R+TL +R   + YY   L C+DSSCG RT+   V G  C  RGC+GRL+QEY ++ L+ QLK+FE+LFD  RAQ  ++E  +L   E+P   +H ++   + + +  D +SS YNWI+P +WS+VF
Sbjct:    1 VPSVGCSV------ADQARHPNVVTNSNSQLKVDIEWYLSQQILPPIARLCEPIEGTSQGQLASQLGLDASKFRGPQVGGGSSSTGDDLDP-AFTPLSKMEDAERFRDVRKLQLACLKCKEEEAEFPGVYMRDQAQQPVGS------GLNCPK--CGEEFWGAPNAGACFSRLHNRMTLLLRQCQQSYYDCWLVCEDSSCGARTQQQSVRGPCCLARGCRGRLSQEYSEQDLHTQLKYFESLFDAKRAQRMLAEK-SLNFPEIP--KKHVELFKAIKQMVAKDAESSAYNWIQPDIWSTVF 283          
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: A0A836C9W2_9STRA (DNA-directed DNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W2_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.130e-79
Identity = 139/313 (44.41%), Postives = 184/313 (58.79%), Query Frame = 0
Query:    1 MMKAGKSVNVGHHIPYVMCKIEGATSPAERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSNTAGG----DDGDDWAFTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVFAWDRKKPVNSPADLKPGLVCPNAACGAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRSTGVMGVACPGRGC-QGRLAQEYPDKALYDQLKFFETLFDVDRAQTKVSELFNLKAAELPVSAEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVF 308
            M +AGK VNVG+HIPY++C+     +PAERARHP+D++RS G L  DVEWYL+QQ+VPP++RLCEPIEGTS AI+A++MGLD ++F+            +D +DWAFTP S + D ERF+   PLR  C                      +PA                 WG  NE AC S L Q L LA+R       +    CDD+ CG RTR  GV G ACP  GC QGRL+ EY +K LY+QLK FE LFD+ RAQ +  +   L   +L V   H ++L L+  + + +V SS YNW++P+LW++VF
Sbjct:  212 MQRAGKPVNVGNHIPYIICR--QTQTPAERARHPEDVMRSGGALVPDVEWYLAQQMVPPIARLCEPIEGTSAAIIAQQMGLDPARFSKGGXXXXXXNRDNDAEDWAFTPVSLMSDEERFKDCMPLRARCAG----------------SSALTPAXXXXXXXXX-------LWGHRNEVACFSALVQALVLAIRAAQARAAEGWYVCDDTCCGARTRDVGVRGSACPAPGCRQGRLSPEYSEKDLYEQLKSFEALFDLKRAQKRCHDRTKLPTGQLAVPKTHERVLELLLVKAKAEVDSSDYNWVKPTLWATVF 499          
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: A0A7S2B5J2_9STRA (DNA-directed DNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5J2_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.620e-72
Identity = 122/283 (43.11%), Postives = 172/283 (60.78%), Query Frame = 0
Query:   28 AERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSNTAGGDDGDDWAFTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVFAWDRKKPVNSPADLKPGLVCPNAACGAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRSTGVMGVACPGRGCQGRLAQEYPDKALYDQLKFFETLFDVDRAQTKVSELFNLKAAELPVSAEH--RQILSLVGRRIQDDVQSSGYNWIRPSLWSSVF 308
            AERA HP+++ RS G+L VDVEWYL+QQI+PP+ RLCEPI+GTS A LAE++GLD SKF  H  T G    D  A+ P  ++ D++RF+G   L +TC  C  ++ F GV  W++ +          GL+CPN  CG  YWGA N A+C + L     L VR   + YY+  L+CDDSSC   T+   ++G  C  RGCQGRL  E+ +K LY QLKF+++LFDV R +T+ S    L   + P   EH   +++ L+ +    +V++S YNW+    + + F
Sbjct:   20 AERAYHPNEVARSQGKLVVDVEWYLTQQILPPIDRLCEPIDGTSTAELAERLGLDRSKFH-HRRTEGDSSRDLCAYVPMCQMEDSDRFKGTRNLDITCTKCAVKSAFPGVVNWEKNQS---------GLLCPN--CGVEYWGAGNAASCFARLSNVYCLQVREDKKRYYKGTLKCDDSSCKTETQQQSIIGNICLSRGCQGRLQPEFSEKDLYTQLKFYQSLFDVTRKRTRDSTESPL---QFPGDKEHSYEKVMDLMSQLTSREVENSKYNWVPFKFFEAAF 287          
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS)

HSP 1 Score: 245 bits (625), Expect = 6.820e-70
Identity = 132/321 (41.12%), Postives = 189/321 (58.88%), Query Frame = 0
Query:    1 MMKAGKSVNVGHHIPYVMCKIEGATSP-------AERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSNTAGGDDGDDWAFTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVFAWDRKKPVNSPADLKPGLVCPNAACGAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRSTGVMGVACPGRGCQGRLAQEYPDKALYDQLKFFETLFDVDRA-------QTKVSELFNLKAAELPVSAEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSV 307
            M+K  K+V++G HIPYV+ ++E    P       AERARHPD+I RSNG ++ DVEWYL+QQI+PP+SRLCEPIEGTS  ILAEK+GLD SK+  +  +A  D+ D   +TP S LPD ERF+ VE L +TC  C++ A+F GVF   ++  V+  A    G+ CPN  CG   WG A+  +C++ +  R+ L  +   ++YY   +RCDD  C L TR   V    C   GC GR+   Y + +L  QLK+F++LFD+D A       Q+ ++E   LK+    ++   +    L+       +  SGYNW+    + S+
Sbjct:  829 MLKDHKAVSIGDHIPYVITELEKEEEPSNKKTLAAERARHPDEIERSNGAMKPDVEWYLTQQILPPISRLCEPIEGTSPGILAEKLGLDSSKYN-NIVSANIDEDDIVDYTPASCLPDEERFKDVEKLVVTCSGCNESAEFPGVFRLVKENGVSYCAS---GMSCPNPVCGRPNWGDADLESCIAKILNRMNLMKKEQQKLYYDGLVRCDDPMCNLETRQLSVYEGCCLKAGCNGRMKTVYTESSLQTQLKYFDSLFDIDHACKQLKKSQSSLTEKEMLKS----LNGADKDAFQLLHGVSSCSLSKSGYNWVAADFFQSL 1141          
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: A0A7S1U0K6_9STRA (DNA-directed DNA polymerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0K6_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.190e-69
Identity = 122/284 (42.96%), Postives = 174/284 (61.27%), Query Frame = 0
Query:   28 AERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSNTAGGDDGD--DWAFTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVFAWDRKKPVNSPADLKPGLVCPNAACGAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRSTGVMGVACPGRGCQG-RLAQEYPDKALYDQLKFFETLFDVDRAQTKVSELFNLKAAELPVSAEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVF 308
            AERA HP+D++RS G +  DVEWY++QQI+PP+SRLCEPI GTS  +LA  +GLD  ++       GG+D +  D   TP S+L D ERFR    L++ C AC  +++F GV+    K P  +P     GL C    C A + GA N A+C + L  ++ LAVR H + YY   L CDD+SCG  TR   V+G  C   GC+G RL   + +K LY+QLK++E+L D  RA TK+ +         P++++   +  L+ R++++ V +S YNWIRPSLW++VF
Sbjct:   10 AERAYHPEDVIRSGGTVTPDVEWYIAQQILPPISRLCEPIAGTSQPMLAAALGLDAKRYAG----VGGNDDEAMDIGMTPMSQLDDKERFRDCTKLKVRCLACTVESEFPGVYHVVAK-PGMAPTSGS-GLRCTE--CDAPFLGAPNAASCFARLSNKINLAVRAHQQQYYNPVLTCDDASCGFITRQQSVLGANCMNSGCRGGRLRAAFDEKKLYNQLKYYESLVDEPRALTKLQDSGG--PTPTPLTSDESIVFGLLKRQVKEMVNNSAYNWIRPSLWAAVF 283          
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: A0A482SUR9_9ARCH (DNA-directed DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUR9_9ARCH)

HSP 1 Score: 227 bits (578), Expect = 2.280e-69
Identity = 121/281 (43.06%), Postives = 164/281 (58.36%), Query Frame = 0
Query:   28 AERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSNTAGGDDGDDWAFTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVFAWDRKKPVNSPADLKPGLVCPNAACGAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRSTGVMGVACPGRGCQGRLAQEYPDKALYDQLKFFETLFDVDRAQTKVSELFNLKAAELPVSAEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVF 308
            A+RA HPD++ R   +L +D EWYL  QI+PP+SRLCEPIEGTS AIL+EK+GLD +K+   +        D W +TPT  L DAERF+GVE L + C  C ++++   +        V   AD+   L C    C A Y G  +       L  R+ L VR  ++ YY   L+CDDSSC LRT    + GV C   GC GRL QEY +  L+ QLK+ E+LFDV R Q++ S       A LP   +H+++L L+   +   ++ S YNW+RPSLWS+VF
Sbjct:   15 AQRAYHPDEVERRKDELAIDFEWYLGTQILPPISRLCEPIEGTSAAILSEKLGLDAAKYARSTGATDDFVEDAWGYTPTCLLDDAERFKGVERLVVKCTTCLKESELDSIM------DVQQGADM---LACKQ--CHAMYLGRDHPRDAYCYLSNRVNLLVRQCVKKYYDCWLKCDDSSCDLRTMQQSIRGVFCTMDGCSGRLRQEYDENMLHTQLKYLESLFDVKRFQSRKSIDDKTLFAVLP--RDHQEVLRLLKEDMASVIKGSAYNWVRPSLWSAVF 282          
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: A0A397ET21_9STRA (DNA-directed DNA polymerase (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ET21_9STRA)

HSP 1 Score: 227 bits (579), Expect = 3.230e-69
Identity = 130/319 (40.75%), Postives = 184/319 (57.68%), Query Frame = 0
Query:    5 GKSVNVGHHIPYVMCKIEGATSPAERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSNTAGGDDGDDWAFTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVFAWDRKKPVNSPADLKPGLVCPNAACGAYYWGAANEAAC-------VSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRST---GVMGVACPGRGCQGRLAQEYPDKALYDQLKFFETLFDVDRAQTKVS-ELFNLKAAELPVSA---EHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVFT 309
            GK++ VG HIPYV+CK E A S   RA HPD++ RS+G+L +D+EWYL  QI PPV+RLC  I+GTS   LA+ +GLD SKF SHS    GDD  D    P+    D++RF+   PLR+TC  C Q+  F+GV+A       +  +    GL+CPNAAC A +WG               S +  R+ LA+R+  R YYQ  + C +  C  RT+     G  G AC   GC+G +  EY D ALY QLK++E+L DV+ A   +  E       E+ V A    HR + + +  +I++ +  + YNW++PS+W+S+F+
Sbjct:   13 GKAIGVGAHIPYVLCKEEEAGS-LRRAYHPDEVTRSHGKLNIDIEWYLEAQIHPPVNRLCAHIDGTSSPQLAQCLGLDTSKF-SHSVQNVGDDEVD--VIPSVLQHDSDRFKSCTPLRLTCLKCGQENAFEGVYA-------SRASRYSSGLLCPNAACSAIFWGYDQRGLYGQVGDDFASLVSNRMHLAIRDCTRRYYQGWVVCTEGLCSSRTQKQSLRGRRGDACSVTGCRGTVCMEYSDSALYTQLKYYESLVDVNHALDNIQKENARQPGQEITVGALSDSHRNLFAKLCVQIRETIDRNDYNWVKPSMWTSLFS 320          
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Match: A0A8J9S0I2_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S0I2_PHATR)

HSP 1 Score: 233 bits (594), Expect = 7.280e-69
Identity = 119/320 (37.19%), Postives = 183/320 (57.19%), Query Frame = 0
Query:    1 MMKAGKSVNVGHHIPYVMCKIEGA---------TSPAERARHPDDILRSNGQLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSNTAGGDDGDDWA-FTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVFAWDRKKPVNSPADLKPGLVCPNAAC-GAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNLRCDDSSCGLRTRSTGVMGVACPGRGCQGRLAQEYPDKALYDQLKFFETLFDVDRAQTKVSELFNLKAAELPVSAEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVFT 309
            M+K  + VN G HIPY++   E A         +S AERARHP++ILRSNG L+ DVEWYL+QQI+PPV+RLCEPIEG S  +LAEK+GLD S++     T+G  D D+   +TP S L D ERF+ VE   + C  C  ++ F GV+         +   +  GL C N  C    +WG A +  C + +   +++  ++ MR YY + +RCD+  C L TR   V+G  C  RGC G++   + ++++Y  LK+ E+LF++D A T+ ++    +     +      I   + +     ++S+G+NWI P+ W+ +F+
Sbjct:  224 MLKNNRPVNTGDHIPYIITVSEEAEAEDKKPKSSSSAERARHPEEILRSNGALKPDVEWYLTQQILPPVARLCEPIEGMSQQVLAEKLGLDASRYNHAVRTSGDIDADELIDYTPASSLSDTERFKEVEKFYLHCYGCGVESQFPGVYHVVTNSQTGNQNTVS-GLHCTNPDCLRPMFWGHATQFECFARISNNISIWTQDVMRRYYSSAIRCDEPGCSLETRQLSVVGGVCLRRGCNGKMCSVFSERSVYTHLKYMESLFNIDHASTQWNKKKKKQDDSYALVKNDETIFKELHKVAMRGLESNGFNWISPAFWNGMFS 542          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1030.449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI10_ECTSI5.350e-20288.75DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A4D9CVK1_9STRA5.860e-9350.31DNA polymerase n=1 Tax=Nannochloropsis salina CCMP... [more]
A0A7S2V4V6_9STRA2.160e-8346.51DNA-directed DNA polymerase n=1 Tax=Fibrocapsa jap... [more]
A0A836C9W2_9STRA1.130e-7944.41DNA-directed DNA polymerase n=1 Tax=Tribonema minu... [more]
A0A7S2B5J2_9STRA1.620e-7243.11DNA-directed DNA polymerase n=1 Tax=Dictyocha spec... [more]
B8LEG9_THAPS6.820e-7041.12DNA polymerase (Fragment) n=1 Tax=Thalassiosira ps... [more]
A0A7S1U0K6_9STRA1.190e-6942.96DNA-directed DNA polymerase n=1 Tax=Phaeomonas par... [more]
A0A482SUR9_9ARCH2.280e-6943.06DNA-directed DNA polymerase n=1 Tax=archaeon TaxID... [more]
A0A397ET21_9STRA3.230e-6940.75DNA-directed DNA polymerase (Fragment) n=2 Tax=Aph... [more]
A0A8J9S0I2_PHATR7.280e-6937.19Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042087DNA polymerase family B, C-terminal domainGENE3D1.10.132.60coord: 1..96
e-value: 5.1E-26
score: 93.2
IPR015088Zinc finger, DNA-directed DNA polymerase, family B, alphaPFAMPF08996zf-DNA_Polcoord: 107..300
e-value: 5.7E-46
score: 156.6
IPR006134DNA-directed DNA polymerase, family B, multifunctional domainPFAMPF00136DNA_pol_Bcoord: 3..67
e-value: 5.7E-6
score: 25.3
IPR038256DNA polymerase alpha, zinc finger domain superfamilyGENE3D1.10.3200.20coord: 104..293
e-value: 3.6E-44
score: 152.3
NoneNo IPR availablePANTHERPTHR45861FAMILY NOT NAMEDcoord: 1..307
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 3..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1030contigS-firma_F_contig1030:18734..22265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1030.449.1mRNA_S-firma_F_contig1030.449.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1030 17905..22280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1030.449.1 ID=prot_S-firma_F_contig1030.449.1|Name=mRNA_S-firma_F_contig1030.449.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=321bp
MMKAGKSVNVGHHIPYVMCKIEGATSPAERARHPDDILRSNGQLEVDVEW
YLSQQIVPPVSRLCEPIEGTSMAILAEKMGLDVSKFTSHSNTAGGDDGDD
WAFTPTSKLPDAERFRGVEPLRMTCRACHQQADFQGVFAWDRKKPVNSPA
DLKPGLVCPNAACGAYYWGAANEAACVSTLYQRLTLAVRNHMRVYYQTNL
RCDDSSCGLRTRSTGVMGVACPGRGCQGRLAQEYPDKALYDQLKFFETLF
DVDRAQTKVSELFNLKAAELPVSAEHRQILSLVGRRIQDDVQSSGYNWIR
PSLWSSVFTSHALPRAIKAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038256Pol_alpha_znc_sf
IPR006134DNA-dir_DNA_pol_B_multi_dom
IPR015088Znf_DNA-dir_DNA_pol_B_alpha
IPR042087DNA_pol_B_C