prot_S-firma_F_contig10194.303.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10194.303.1
Unique Nameprot_S-firma_F_contig10194.303.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length325
Homology
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 2.980e-85
Identity = 152/258 (58.91%), Postives = 194/258 (75.19%), Query Frame = 0
Query:   69 GLYCGGAENSTSEAA---ASCSLSGAVFRFNNASSEAIIDYDTV-----EAPWINLYGGGGAAFYRGAVDMAGSVFEFNYAQLSGGGVYGGSDSDMAIDGCRFEENFTPGYGGAVAASSATLGGGTVVTNNSAEANGAGVFGWDETGAIELNDLVCTDNTAVGNGGCFYVSGGGVVNAGTVMANNEGKYGGCIYAFGGCDLDVFGGDFTVCLATANGAFMFASDGAIVSIKNASVSDSVATRRGGVVYCSGDSFDLGG 318
            GL+CGG+EN+T  +A   ASCSL+G +F FNNASSE I+DYD +     +AP I LYGGGGAAFY   V++  SVFE NYAQLSGG ++GG+DS MAIDG   E NFTPG+ GA+AAS+ATLGG T+  NNSA  +G GV GWD TG +E ND+VC++NTA GNGGCFY SG G++NAGT+M +N G YG  ++AF G  + V GG+FT   A ++G F++A+DGA V+IK A+VS++VA RR G VYCSG+  D+GG
Sbjct:  206 GLFCGGSENATLLSASDNASCSLNGVIFAFNNASSETILDYDNMAAPSTQAPLITLYGGGGAAFYHTVVNITDSVFESNYAQLSGGALFGGTDSAMAIDGVTLENNFTPGFAGALAASTATLGGNTLFMNNSAMQSGGGVLGWDSTGTVEFNDVVCSNNTAGGNGGCFYGSGRGILNAGTLMRSNGGIYGASVFAFAGSYISVEGGNFTANRAVSSGGFLYATDGANVTIKGAAVSNNVADRRAGAVYCSGEFLDMGG 463          
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 3.480e-77
Identity = 149/255 (58.43%), Postives = 177/255 (69.41%), Query Frame = 0
Query:   66 EGGGLYCGGAENSTSEAAA--------SCSLSGAVFRFNNASSEAIIDYDTVEAPWINLYGGGGAAFYRGAVDMAGSVFEFNYAQLSGGGVYGGSDSDMAIDGCRFEENFTPGYGGAVAASSATLGGGTVVTNNSAEANGAGVFGWDETGAIELNDLVCTDNTAVGNGGCFYVSGGGVVNAGTVMANNEGKYGGCI---YAFGGCDLDVFGGDFTVCLATA-NGAFMFASDGAIVSIKNASVSDSVATRRGGVVY 308
            EG GLYCGGAENS              +CSLSGAVF  NNASSE I+DYD +EAPW+ LYGGG AAFYRG VD+ GS F  NYAQ+SGG VYGG+DS + IDG  FEEN TPGYGG +AASSA LGG T++ NNSA +NGAGVFGWDE G IEL+D++CT+NTA G+GGC YV+G GVVN GTVM  NEGKYGGCI   +  GG  + V GG FT   A    GAF+      +++I     S++ A   GG ++
Sbjct:  215 EGXGLYCGGAENSXXXXXXXXXXXXXXTCSLSGAVFGANNASSETIVDYDLIEAPWVTLYGGGAAAFYRGVVDITGSEFLGNYAQVSGGAVYGGTDSVLTIDGSSFEENTTPGYGGGLAASSAVLGGDTLLRNNSATSNGAGVFGWDEDGEIELHDILCTENTATGHGGCLYVAGVGVVNNGTVMITNEGKYGGCIWDSFDLGGSQVTVEGGRFTDNRALELGGAFVAWGTPTVLTITGGFFSNNTAKFYGGFIF 469          
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 3.420e-70
Identity = 128/210 (60.95%), Postives = 150/210 (71.43%), Query Frame = 0
Query:   69 GLYCGGAENST---SEAAASCSLSGAVFRFNNASSEAIIDYDTVEAPWINLYGGGGAAFYRGAVDMAGSVFEFNYAQLSGGGVYGGSDSDMAIDGCRFEENFTPGYGGAVAASSATLGGGTVVTNNSAEANGAGVFGWDETGAIELND-LVCTDNTAVGNGGCFYVSGGGVVNAGTVMANNEGKYGGCIYAFGGCDLDVFGGDFTVCLAT 274
            GLYCGG  NST   + A A CSLS A F FNNASSE I+DYD +  PW+NLYGGGG A YR  VD+  S F+ NYAQLSGG +YGG+D+ +AIDGC FE NFTPG+G AVAASSATLGG TV+TNN A  NG GVFGWD  G IE +  +VC+ N A   GGCFY +GGG +N GTVM  N  + GGC+YA  G D+ V GG+F  C +T
Sbjct:  205 GLYCGGGVNSTLLSAGATAFCSLSDATFEFNNASSETILDYDAITEPWVNLYGGGGVAVYRAVVDITDSEFQGNYAQLSGGALYGGTDAAIAIDGCWFENNFTPGHGAAVAASSATLGGSTVLTNNLATQNGGGVFGWDTAGRIEFSSGVVCSTNLADEKGGCFYTTGGGTINNGTVMRENISRSGGCLYALNGSDVTVHGGEFRECQST 414          
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 3.190e-57
Identity = 125/257 (48.64%), Postives = 153/257 (59.53%), Query Frame = 0
Query:   69 GLYCGGAENST--SEAAASCSLSGAVFRFNNASSEAIIDYDTVEAPWINLYGGGGAAFYRGAVDMAGSVFEFNYAQLSGGGVYGGSDSDMAIDGCRFEENFTPGYGGAVAASSATLGGGTVVTNNSAEANGAGVFGWDETGAIELNDLVCTDNTAVGNGGCFYVSGGGVVNAGTVMANNEG-KYGGCIYAFGGCDLDVFGGDFTVCLATANGAFMFASDGAIVSIKNASVSDSVATRRGGVVYCSGDSFDLGGSRVA 322
            GLYCGG E +   ++A +SCSLS AVF  NNAS E  I Y +       + GGG AAF+   V+++ SVF  NYAQLSGG V+GG+ ++MAI+GC+FE N T GYG AVAA SATLGG T +TNNSAE NGAGVFGWD TG +  +D+VC+DNTA G GGC+Y +G G+VN G VM  N     G      GGCD+ V GG+F +C A                                   CSGD+  LGGS VA
Sbjct:  244 GLYCGGNETTAFANDATSSCSLSEAVFIANNASRETEIQYPSYWVSTDEVDGGGAAAFWYAEVNISDSVFGSNYAQLSGGAVFGGNSTEMAINGCKFENNTTLGYGAAVAACSATLGGSTTLTNNSAEENGAGVFGWDPTGTVVFDDVVCSDNTAGGLGGCYYAAGKGIVNDGAVMRGNSALDDGXXXXGSGGCDITVHGGEFAMCTAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSGDTTGLGGSFVA 500          
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.130e-53
Identity = 92/126 (73.02%), Postives = 112/126 (88.89%), Query Frame = 0
Query:  200 VFGWDETGAIELNDLVCTDNTAVGNGGCFYVSGGGVVNAGTVMANNEGKYGGCIYAFGGCDLDVFGGDFTVCLATANGAFMFASDGAIVSIKNASVSDSVATRRGGVVYCSGDSFDLGGSRVAIEG 325
            VFGWDE G IEL+D++CT+NTA+G+GGC YV+G GVVN GTVM  NEGKYGGCIYA+GG DL+V GG+FT CLAT+NGAFMFASDGA+V++K+A+V + VATRRG V+YCSGDSFDLGGS+V +EG
Sbjct:    2 VFGWDEDGEIELHDILCTENTAIGHGGCLYVAGVGVVNNGTVMVKNEGKYGGCIYAYGGSDLEVLGGEFTACLATSNGAFMFASDGALVNVKDATVRNGVATRRGAVIYCSGDSFDLGGSQVTVEG 127          
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: A0A6H5JB86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB86_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 7.480e-50
Identity = 96/144 (66.67%), Postives = 109/144 (75.69%), Query Frame = 0
Query:   66 EGGGLYCGGAENSTSEAA---------ASCSLSGAVFRFNNASSEAIIDYDTVEAPWINLYGGGGAAFYRGAVDMAGSVFEFNYAQLSGGGVYGGSDSDMAIDGCRFEENFTPGYGGAVAASSATLGGGTVVTNNSAEANGAGV 200
            EG GLYCGGAENST+            A+CSLSGAVF  NNASSE I+DYD +E+PW+ LYGGG AAFYRG VD+ GS F  NYAQ+SGG VYGGSDS + IDG  FEEN TPGYGG +AASSA LGG T++ NNSA +NGAGV
Sbjct:  215 EGXGLYCGGAENSTTMTXXXXXXXXXXATCSLSGAVFGANNASSETIVDYDLIESPWVTLYGGGAAAFYRGVVDITGSEFLGNYAQVSGGAVYGGSDSVLTIDGSSFEENTTPGYGGGLAASSAVLGGDTLLRNNSATSNGAGV 358          
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 5.260e-35
Identity = 97/252 (38.49%), Postives = 126/252 (50.00%), Query Frame = 0
Query:   69 GLYCGGAENSTSEAAASCSLSGAVFRFNNASSEAIIDY-DTVEAPWINLYGGGGAAFYRGAVDMAGSVFEFNYAQLSGGGVYGGSDSDMAIDGCRFEENFTPGYGGAVAASSATLGGGTVVTNNSAEANGAGVFGWDETGAIELNDLVCTDNTAVGNGGCFYVSGGGVVNAGTVMANNEGKYGGCIYAFGGCDLDVFGGDFTVCLATANGAFMFASDGAIVSIKNASVSDSVATRRGGVVYCSGDSFDLGGS 319
            GLYC G   S+   A SCSLS A F  N A++ A + + DT+E  W +LYGGG AAFY  AV++  S+FE NYAQ+SGGG++GGS S M+IDGC    N                        N A+ +G GVFGW   GA+E+ND+ C+ N A  NGGCFY                               ++V GG+F  C +T+N                  V+++VA RR GVVY SGDS   GG+
Sbjct:  215 GLYCSGGVESS---APSCSLSDATFTSNVATTGAEVSFSDTIET-WADLYGGGAAAFYLAAVEITNSLFELNYAQVSGGGIFGGSGSSMSIDGCTINNNXXXXXXXXXXXXXXXXXXXXXXXXNVADESGGGVFGWYSRGAVEMNDVTCSLNEAEENGGCFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVNGGEFRGCRSTSNXXXXXXXXXXXXXXXXXLVANNVAERRAGVVYSSGDSNGFGGA 462          
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: D7FRH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH2_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 2.090e-22
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 0
Query:   69 GLYCGGAENSTSEAAASCSLSGAVFRFNNASSEAIIDY-DTVEAPWINLYGGGGAAFYRGAVDMAGSVFEFNYAQLSGGGVYGGSDSDMAIDGCRFEENFTPGYG 172
            GLYC G   S+     SCSLS A F  N AS+ A +   DTVE  W +LYGGG AAFY   V++  S+FE NYAQ+SGGG++GGS S M+IDGC    N TPGYG
Sbjct:  215 GLYCSGGVESSDP---SCSLSDAAFTSNEASTGAEVSLSDTVET-WADLYGGGAAAFYLATVEITDSLFELNYAQVSGGGIFGGSGSSMSIDGCTINNNTTPGYG 315          
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: A0A6H5JZ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ37_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.830e-20
Identity = 57/126 (45.24%), Postives = 77/126 (61.11%), Query Frame = 0
Query:  200 VFGWDETGAIELNDLVCTDNTAVGNGGCFYVSGGGVVNAGTVMANNEGKYGGCIYAFGGCDLDVFGGDFTVCLATANGAFMFASDGAIVSIKNASVSDSVATRRGGVVYCSGDSFDLGGSRVAIEG 325
            V GWD TGA+E ND+V ++NTA GNGGCFY SG G++NAG                     + V GG  T   A  +G F++A+ GA V+IK  ++S++VA RR G V+ SG+  D+GGS+V IEG
Sbjct:   38 VLGWDSTGAVEFNDVVGSNNTAGGNGGCFYGSGRGILNAGXXXXXXXXXX--XXXXXXXXXISVEGGKLTTHRAVGSGGFLYAAAGANVTIKGGAMSNNVADRRAGAVHFSGEFLDMGGSKVTIEG 161          
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 7.670e-14
Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 0
Query:  211 LNDLVCTDNTAVGNGGCFYVSGGGVVNAGTVMANNEGKYGGCIYAFGGCDLDVFGGDFTVCLATANGAFMFASDGAIVSIKNASVSDSVATRRGGVVYCSGDSFDLGGS 319
            +ND+ C+ N A  NGGCFY +G G+VN                      +++V GG+F  C +T NG FM+ SDG  V+I    V+++VA RR GVVY SGDS DLGG+
Sbjct:    1 MNDVTCSLNEAEENGGCFYSAGIGIVNXXXXXXXXXXXXXXXXXXSADSNVNVNGGEFRGCRSTGNGGFMYVSDGGTVTITGGLVANNVAERRAGVVYSSGDSNDLGGA 109          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10194.303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FRH4_ECTSI2.980e-8558.91Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FRG6_ECTSI3.480e-7758.43Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH3_ECTSI3.420e-7060.95Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH0_ECTSI3.190e-5748.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JCK8_9PHAE1.130e-5373.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB86_9PHAE7.480e-5066.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS31_9PHAE5.260e-3538.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH2_ECTSI2.090e-2255.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZ37_9PHAE1.830e-2045.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH1_ECTSI7.670e-1443.12Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 31..47
e-value: 0.0035
score: 15.1
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 13..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10194contigS-firma_F_contig10194:52..4950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10194.303.1mRNA_S-firma_F_contig10194.303.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10194 52..4952 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10194.303.1 ID=prot_S-firma_F_contig10194.303.1|Name=mRNA_S-firma_F_contig10194.303.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=325bp
GCGRGGNDATAGDGGAVGAEGGELTIVGGEFSANSATGNGGAVLAVDGSV
VIQDGTVFEDNRAMLEGGGLYCGGAENSTSEAAASCSLSGAVFRFNNASS
EAIIDYDTVEAPWINLYGGGGAAFYRGAVDMAGSVFEFNYAQLSGGGVYG
GSDSDMAIDGCRFEENFTPGYGGAVAASSATLGGGTVVTNNSAEANGAGV
FGWDETGAIELNDLVCTDNTAVGNGGCFYVSGGGVVNAGTVMANNEGKYG
GCIYAFGGCDLDVFGGDFTVCLATANGAFMFASDGAIVSIKNASVSDSVA
TRRGGVVYCSGDSFDLGGSRVAIEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR003368POMP_repeat